| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945259
Identifier: 119945259
GI number: 119945259
Start: 1877172
End: 1877549
Strand: Direct
Name: 119945259
Synonym: Ping_1530
Alternate gene names: NA
Gene position: 1877172-1877549 (Clockwise)
Preceding gene: 119945258
Following gene: 119945261
Centisome position: 41.17
GC content: 38.36
Gene sequence:
>378_bases ATGGATATGGATAAATCAGTCAATGTGTTTGGTGAAACATTAGAAATCTGTTGTGAAAACCCAATCACCGGCTTTTACCG CGATGGTAAATGTAATACCAATAAAAATGATGCGGGTTCGCATACGGTTTGTATTAAAGTAACCAAAGAGTTCTTGGAAT ATTCAAAGTCTAGAGGTAATGATTTATCTACACCTGCACCTGAGTTTAATTTTAAAGGTTTAAAGCCTGGAGATAGCTGG TGTGTCTGTGCCTCTCGATGGTTAGAGGCTGAGAAAAATAATATGGCGCCCAGAATTCATCTTCAAAGGACTCACATTAG AGCGATAGAGATTGTGCCAATGGCGTTACTAAAAAAATACGCTGCTGATCTGAATTAG
Upstream 100 bases:
>100_bases TCAACAAGGACAAAATATGGCGGGCTATTTAGTCCGTCATGTTTTTCCTGTTATTAAGGCGTTGGCTTTCTTATTAGTTA TAAATTAAAGGTGTTGTTTT
Downstream 100 bases:
>100_bases GGATTAAAAAACAAGCTTGTAACAAATAAACAAGTGCCGGCTGTTGAGTTTCGCTTTACATTCTGGCACTTAATTTTCAG CCAGTTGTGTAGGCATTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MDMDKSVNVFGETLEICCENPITGFYRDGKCNTNKNDAGSHTVCIKVTKEFLEYSKSRGNDLSTPAPEFNFKGLKPGDSW CVCASRWLEAEKNNMAPRIHLQRTHIRAIEIVPMALLKKYAADLN
Sequences:
>Translated_125_residues MDMDKSVNVFGETLEICCENPITGFYRDGKCNTNKNDAGSHTVCIKVTKEFLEYSKSRGNDLSTPAPEFNFKGLKPGDSW CVCASRWLEAEKNNMAPRIHLQRTHIRAIEIVPMALLKKYAADLN >Mature_125_residues MDMDKSVNVFGETLEICCENPITGFYRDGKCNTNKNDAGSHTVCIKVTKEFLEYSKSRGNDLSTPAPEFNFKGLKPGDSW CVCASRWLEAEKNNMAPRIHLQRTHIRAIEIVPMALLKKYAADLN
Specific function: Unknown
COG id: COG3651
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14099; Mature: 14099
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMDKSVNVFGETLEICCENPITGFYRDGKCNTNKNDAGSHTVCIKVTKEFLEYSKSRGN CCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCC DLSTPAPEFNFKGLKPGDSWCVCASRWLEAEKNNMAPRIHLQRTHIRAIEIVPMALLKKY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH AADLN HHCCC >Mature Secondary Structure MDMDKSVNVFGETLEICCENPITGFYRDGKCNTNKNDAGSHTVCIKVTKEFLEYSKSRGN CCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCC DLSTPAPEFNFKGLKPGDSWCVCASRWLEAEKNNMAPRIHLQRTHIRAIEIVPMALLKKY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH AADLN HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA