| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945258
Identifier: 119945258
GI number: 119945258
Start: 1876474
End: 1877055
Strand: Direct
Name: 119945258
Synonym: Ping_1529
Alternate gene names: NA
Gene position: 1876474-1877055 (Clockwise)
Preceding gene: 119945257
Following gene: 119945259
Centisome position: 41.15
GC content: 41.24
Gene sequence:
>582_bases ATGAGTAAAGTAATTAATGAAATAACCTCAGCAAATGCAGATTATGTCGCAAACTTTGGTGATAAAGGTGATTTGCCAAT GCCTCCTGGCCGACAGTTTGCCATTCTTACCTGTATGGATGCCCGCTTAGACCCTGCTAAATATGCAGGCCTTGCAGAAG GTGATGCTCATGTGATTCGTAATGCTGGTGGTAGAGCCAGTGATGATGCAATACGTTCCTTGGTAATTTCATATAAGTTA CTTGGAACAAAAGAATGGTTTGTTATTCATCATACGGATTGTGGGATGGAAACATTCAACAATGAAATTATGGGTGACCT GTTATCGGGTAGCCTAAAAACAGCCAGTGTAGATCAATCAGGCTGGCATGATAGTAATGCCGGTGGCGGTACAACCGATG GAAAATTCATCGAATGGCTTACCATTAGTGATCAATCGAAAAGCGTTTTGGCCGATGTTCAACGAATTAAAAGTAATTCA ATGGTGCCAAAGGATATTCCTGTTTACGGTTATATTTATGACTGTAAATCTGGAAAACTTGTAGAAGTCCCTGAGGCAAC AGAAGCCGGCAAGGCAAGTTAA
Upstream 100 bases:
>100_bases TATTAGTGATAATGTAGACTAATACACGGTTAGGTTTCCAAAGTCGCCGCATAGGGAATCGCTAAAAAAATCATAGCGGC TATAAAAGTGAGAGTAAAAG
Downstream 100 bases:
>100_bases AAAAACTAACAGTTAATCAACAAGGACAAAATATGGCGGGCTATTTAGTCCGTCATGTTTTTCCTGTTATTAAGGCGTTG GCTTTCTTATTAGTTATAAA
Product: carbonic anhydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSKVINEITSANADYVANFGDKGDLPMPPGRQFAILTCMDARLDPAKYAGLAEGDAHVIRNAGGRASDDAIRSLVISYKL LGTKEWFVIHHTDCGMETFNNEIMGDLLSGSLKTASVDQSGWHDSNAGGGTTDGKFIEWLTISDQSKSVLADVQRIKSNS MVPKDIPVYGYIYDCKSGKLVEVPEATEAGKAS
Sequences:
>Translated_193_residues MSKVINEITSANADYVANFGDKGDLPMPPGRQFAILTCMDARLDPAKYAGLAEGDAHVIRNAGGRASDDAIRSLVISYKL LGTKEWFVIHHTDCGMETFNNEIMGDLLSGSLKTASVDQSGWHDSNAGGGTTDGKFIEWLTISDQSKSVLADVQRIKSNS MVPKDIPVYGYIYDCKSGKLVEVPEATEAGKAS >Mature_192_residues SKVINEITSANADYVANFGDKGDLPMPPGRQFAILTCMDARLDPAKYAGLAEGDAHVIRNAGGRASDDAIRSLVISYKLL GTKEWFVIHHTDCGMETFNNEIMGDLLSGSLKTASVDQSGWHDSNAGGGTTDGKFIEWLTISDQSKSVLADVQRIKSNSM VPKDIPVYGYIYDCKSGKLVEVPEATEAGKAS
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: NA
Molecular weight: Translated: 20751; Mature: 20619
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVINEITSANADYVANFGDKGDLPMPPGRQFAILTCMDARLDPAKYAGLAEGDAHVIR CHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCHHEEE NAGGRASDDAIRSLVISYKLLGTKEWFVIHHTDCGMETFNNEIMGDLLSGSLKTASVDQS CCCCCCCHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC GWHDSNAGGGTTDGKFIEWLTISDQSKSVLADVQRIKSNSMVPKDIPVYGYIYDCKSGKL CCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCE VEVPEATEAGKAS EECCCCCCCCCCC >Mature Secondary Structure SKVINEITSANADYVANFGDKGDLPMPPGRQFAILTCMDARLDPAKYAGLAEGDAHVIR HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCHHEEE NAGGRASDDAIRSLVISYKLLGTKEWFVIHHTDCGMETFNNEIMGDLLSGSLKTASVDQS CCCCCCCHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC GWHDSNAGGGTTDGKFIEWLTISDQSKSVLADVQRIKSNSMVPKDIPVYGYIYDCKSGKL CCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCE VEVPEATEAGKAS EECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]