| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945252
Identifier: 119945252
GI number: 119945252
Start: 1869393
End: 1870085
Strand: Direct
Name: 119945252
Synonym: Ping_1522
Alternate gene names: NA
Gene position: 1869393-1870085 (Clockwise)
Preceding gene: 119945251
Following gene: 119945257
Centisome position: 41.0
GC content: 37.09
Gene sequence:
>693_bases ATGAATACAAAAAATATTTTTACAAAAACCTTATATATAATATTGATTTCAATTACTTTATTAACAAACTCTGCTTCTGC TTCGATCATTTTTGAAAGTAGTAGCATTGACGGGGGCATTAGTTATTTCGGAGGTTCCGATACCAGTAAGTATTTTGAGC GTAGCTTTTTTCCAAGTACAGCCGATAGCGGCTCAGAGCAACTACAGGCATTTAATGGTGATTTATTGAACCAACTAACA TGGAATATTAAAGGCAATAGTGCCACTATCAAGTCCACAATGACCACAATCCCCGAAGCTTCTGAAGCTTGGGTATTGGC TTCATTTTCATTCAGAGTACAGGGTGCCCCGGTTAATTACAGTCTTGAAACATCTGTCGATATGATTAACACCCGCTTTA TGCGTACTCCTGAGGGGAGTTATATCCATGAATGTTTATCGCCCGGTTGTGATTATGACCATCTATGGCCAGGAAAAACA ACGGGCACTTTATACGAAGGTTATACTTATGCATTAGAATTTAGTCCTCACTCATTTGCAGAAAAGACTCAACATTCAGA ATTCCTTTTTCAAGTACCTGAACCGCCAGTCTTAATCATCTTAACACTTGCTTTTTTTACCCTTATATTTAAGAAAGCAG CCATTGAAAATATGAATAGGGTAAGAAAACTGAATAAACCCCTACAGAAATAA
Upstream 100 bases:
>100_bases TAGCAGTATTGCTCTTTTTACCCATTGGTAATTTAAGGCTGATATAAAAGGAATTTATAAATAGATAGCCTTTATTACCT CACTGATAAAGAGGCTACCC
Downstream 100 bases:
>100_bases ATAGCAAGGAAGTGCTAATAAAAGTGTACTTGCATGTACTTTTTAAAAATCCGATTCAAATAATATGTGAATAACTTGAA TCGGTAGAAAAAACGGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNTKNIFTKTLYIILISITLLTNSASASIIFESSSIDGGISYFGGSDTSKYFERSFFPSTADSGSEQLQAFNGDLLNQLT WNIKGNSATIKSTMTTIPEASEAWVLASFSFRVQGAPVNYSLETSVDMINTRFMRTPEGSYIHECLSPGCDYDHLWPGKT TGTLYEGYTYALEFSPHSFAEKTQHSEFLFQVPEPPVLIILTLAFFTLIFKKAAIENMNRVRKLNKPLQK
Sequences:
>Translated_230_residues MNTKNIFTKTLYIILISITLLTNSASASIIFESSSIDGGISYFGGSDTSKYFERSFFPSTADSGSEQLQAFNGDLLNQLT WNIKGNSATIKSTMTTIPEASEAWVLASFSFRVQGAPVNYSLETSVDMINTRFMRTPEGSYIHECLSPGCDYDHLWPGKT TGTLYEGYTYALEFSPHSFAEKTQHSEFLFQVPEPPVLIILTLAFFTLIFKKAAIENMNRVRKLNKPLQK >Mature_230_residues MNTKNIFTKTLYIILISITLLTNSASASIIFESSSIDGGISYFGGSDTSKYFERSFFPSTADSGSEQLQAFNGDLLNQLT WNIKGNSATIKSTMTTIPEASEAWVLASFSFRVQGAPVNYSLETSVDMINTRFMRTPEGSYIHECLSPGCDYDHLWPGKT TGTLYEGYTYALEFSPHSFAEKTQHSEFLFQVPEPPVLIILTLAFFTLIFKKAAIENMNRVRKLNKPLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25713; Mature: 25713
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKNIFTKTLYIILISITLLTNSASASIIFESSSIDGGISYFGGSDTSKYFERSFFPST CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHCCCCC ADSGSEQLQAFNGDLLNQLTWNIKGNSATIKSTMTTIPEASEAWVLASFSFRVQGAPVNY CCCCHHHHHHHCCHHHHHEEEEECCCCEEEHHHHHCCCCCCCCEEEEEEEEEEECCCCCE SLETSVDMINTRFMRTPEGSYIHECLSPGCDYDHLWPGKTTGTLYEGYTYALEFSPHSFA EHHCCHHHHHHHEEECCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEEEECCHHHH EKTQHSEFLFQVPEPPVLIILTLAFFTLIFKKAAIENMNRVRKLNKPLQK HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNTKNIFTKTLYIILISITLLTNSASASIIFESSSIDGGISYFGGSDTSKYFERSFFPST CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHCCCCC ADSGSEQLQAFNGDLLNQLTWNIKGNSATIKSTMTTIPEASEAWVLASFSFRVQGAPVNY CCCCHHHHHHHCCHHHHHEEEEECCCCEEEHHHHHCCCCCCCCEEEEEEEEEEECCCCCE SLETSVDMINTRFMRTPEGSYIHECLSPGCDYDHLWPGKTTGTLYEGYTYALEFSPHSFA EHHCCHHHHHHHEEECCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEEEECCHHHH EKTQHSEFLFQVPEPPVLIILTLAFFTLIFKKAAIENMNRVRKLNKPLQK HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA