| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945251
Identifier: 119945251
GI number: 119945251
Start: 1867444
End: 1868922
Strand: Direct
Name: 119945251
Synonym: Ping_1521
Alternate gene names: NA
Gene position: 1867444-1868922 (Clockwise)
Preceding gene: 119945250
Following gene: 119945252
Centisome position: 40.96
GC content: 36.92
Gene sequence:
>1479_bases ATGAATCAACGAGTTAATTTAATCTATAACCGCCTAATTTTAATTTTTTTATTAGTTATTAGTCCTGCTGTACTATCTGC AAGTTTACAGATTACATGGAGCGATAACTCATCAAATGAAGATGGTTTTTTAGTCGAAAAACGGCTTTTAAACGAGGATA AAATTCAAAATATTGCGATATTACCTGTTAATAGCCAAGAATATAATGATCTAGATCTTGTTAGTAATGAGACATATTGC TATCGCATTACAGCATTTAATAAAGCGGGAATGGGAAAGTCTGACGAATTCTGTTATCAAGTACCGACTGATTTTATTAC AGATGAAGACACTGCTGCTAATCAGGTCACTGCTGTCGATCAGGTCATTGCTGCTGATCAGGACACGGCTGCTGAGCAGG GTATCAGTTCAGTCAAGTTTACTGGAAAGGTTGTCCTATCGCATGAGATTATTGCACAAGTGGTGGATCTTGAGATTGGT GAAAAGACACTTTATTCCTTTAAAAGTGATCTTGCATATAATCAGGAATATACCAAAGATACGCTTAATAACAGTAGCTT TACGGCTAATGTTGGTGAAATAAGATATTCAAATGAAGATTATTTTAGCTTTCAAAATCAGGGTGTTGAAATTGATAATG GCTACGCGAGTATGGCATTTAACAGCAATAATAGCCTCTCATTTGTTTTACAGGGTACGGGCAATAAACAAACTGCGCGT TTGTATATGCAAGCAGGTGTATGGTCTGACGAGCAATCTAATATTATTGTAACAGCGGGTGATCAGGTTGAGGTTATTAC GCTACCTAATGGTTATGCTTGGCATTCCTTTGCCATTGATATTGTTTTTGATGGCACTGTACCTGTCCATATAGCAACAG AGTCCGATCGTTCAGGTTACAGCACTGTTATGTTTGCTGGCATTGTTTTTGATAAAGAAAATTTAGAAAAAAATACTTCT GTTGCCTCCCCTGTTTTTAACTATGCAGCTTTTGTTGATATAGATACAAATTTTGGTGCAGTAATTGATACCACAGACGT CACTTTTTACACTGCAAAAGCGATTAAGGATAATGGACAACTCTCTAATGCTTCTCTGCAAAACTTATCCTTTTATGGTG AACAAATATATCGTGATGATATTTATTCTGTCATTAATGATGGAGCTGAAATAAATTCAGGTTATCAAAGCATGTCATGG AATGAGGCTAACGGTGCTGAAATTAAACTTGAAAGTGCTGATCAACAGATAAATACGGCTTCTGTCTATTTTATTGCGGC AGTTTGGAGCTATGATGCAGCATTTGTTGAGCTGGTTATCAACGGTGAAAGTGAATTAATTGAGGTACCTTCAGGTTATG GATGGCATTCCATGAAAGTTGACATTGAATTTGAAGGTATCGTCGATATAAATATCCATCCAGTGGGTGAATTCGGAGGC TATAGTGGCTTCGGTGTTGCAGGGATAACCGTACAATAG
Upstream 100 bases:
>100_bases TAGTCTATGGCAGCGGAGTTACCAAGGCGATAGCACTTCTTATCATCCCTTCTAATTTGCAAATTATAAATAACTGCTTG ATCACTTTTGTGGAGACAAA
Downstream 100 bases:
>100_bases GGTAGATAAAGTGCTTTGGTTATAATAGGGAAGAAGCAAAGGCTTATTCCCTATTTTTTAATACAATTGCAACAAAGCTT TTTTATCATCAGCCGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MNQRVNLIYNRLILIFLLVISPAVLSASLQITWSDNSSNEDGFLVEKRLLNEDKIQNIAILPVNSQEYNDLDLVSNETYC YRITAFNKAGMGKSDEFCYQVPTDFITDEDTAANQVTAVDQVIAADQDTAAEQGISSVKFTGKVVLSHEIIAQVVDLEIG EKTLYSFKSDLAYNQEYTKDTLNNSSFTANVGEIRYSNEDYFSFQNQGVEIDNGYASMAFNSNNSLSFVLQGTGNKQTAR LYMQAGVWSDEQSNIIVTAGDQVEVITLPNGYAWHSFAIDIVFDGTVPVHIATESDRSGYSTVMFAGIVFDKENLEKNTS VASPVFNYAAFVDIDTNFGAVIDTTDVTFYTAKAIKDNGQLSNASLQNLSFYGEQIYRDDIYSVINDGAEINSGYQSMSW NEANGAEIKLESADQQINTASVYFIAAVWSYDAAFVELVINGESELIEVPSGYGWHSMKVDIEFEGIVDINIHPVGEFGG YSGFGVAGITVQ
Sequences:
>Translated_492_residues MNQRVNLIYNRLILIFLLVISPAVLSASLQITWSDNSSNEDGFLVEKRLLNEDKIQNIAILPVNSQEYNDLDLVSNETYC YRITAFNKAGMGKSDEFCYQVPTDFITDEDTAANQVTAVDQVIAADQDTAAEQGISSVKFTGKVVLSHEIIAQVVDLEIG EKTLYSFKSDLAYNQEYTKDTLNNSSFTANVGEIRYSNEDYFSFQNQGVEIDNGYASMAFNSNNSLSFVLQGTGNKQTAR LYMQAGVWSDEQSNIIVTAGDQVEVITLPNGYAWHSFAIDIVFDGTVPVHIATESDRSGYSTVMFAGIVFDKENLEKNTS VASPVFNYAAFVDIDTNFGAVIDTTDVTFYTAKAIKDNGQLSNASLQNLSFYGEQIYRDDIYSVINDGAEINSGYQSMSW NEANGAEIKLESADQQINTASVYFIAAVWSYDAAFVELVINGESELIEVPSGYGWHSMKVDIEFEGIVDINIHPVGEFGG YSGFGVAGITVQ >Mature_492_residues MNQRVNLIYNRLILIFLLVISPAVLSASLQITWSDNSSNEDGFLVEKRLLNEDKIQNIAILPVNSQEYNDLDLVSNETYC YRITAFNKAGMGKSDEFCYQVPTDFITDEDTAANQVTAVDQVIAADQDTAAEQGISSVKFTGKVVLSHEIIAQVVDLEIG EKTLYSFKSDLAYNQEYTKDTLNNSSFTANVGEIRYSNEDYFSFQNQGVEIDNGYASMAFNSNNSLSFVLQGTGNKQTAR LYMQAGVWSDEQSNIIVTAGDQVEVITLPNGYAWHSFAIDIVFDGTVPVHIATESDRSGYSTVMFAGIVFDKENLEKNTS VASPVFNYAAFVDIDTNFGAVIDTTDVTFYTAKAIKDNGQLSNASLQNLSFYGEQIYRDDIYSVINDGAEINSGYQSMSW NEANGAEIKLESADQQINTASVYFIAAVWSYDAAFVELVINGESELIEVPSGYGWHSMKVDIEFEGIVDINIHPVGEFGG YSGFGVAGITVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54222; Mature: 54222
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRVNLIYNRLILIFLLVISPAVLSASLQITWSDNSSNEDGFLVEKRLLNEDKIQNIAI CCCHHHHHHHHHHHHHHHHHCHHHEEEEEEEEECCCCCCCCCEEEEHHHCCCCCCCEEEE LPVNSQEYNDLDLVSNETYCYRITAFNKAGMGKSDEFCYQVPTDFITDEDTAANQVTAVD EECCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHH QVIAADQDTAAEQGISSVKFTGKVVLSHEIIAQVVDLEIGEKTLYSFKSDLAYNQEYTKD HHHHCCCCHHHHCCCCEEEEEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHH TLNNSSFTANVGEIRYSNEDYFSFQNQGVEIDNGYASMAFNSNNSLSFVLQGTGNKQTAR HCCCCCEEEECCEEEECCCCEEEECCCCEEEECCEEEEEECCCCCEEEEEECCCCCCEEE LYMQAGVWSDEQSNIIVTAGDQVEVITLPNGYAWHSFAIDIVFDGTVPVHIATESDRSGY EEEEECCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEEEECCEEEEEEEECCCCCCC STVMFAGIVFDKENLEKNTSVASPVFNYAAFVDIDTNFGAVIDTTDVTFYTAKAIKDNGQ EEEEEEEEEEECCCCCCCCCCCCCHHCEEEEEEECCCCCEEEECCCEEEEEEEEECCCCC LSNASLQNLSFYGEQIYRDDIYSVINDGAEINSGYQSMSWNEANGAEIKLESADQQINTA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCE SVYFIAAVWSYDAAFVELVINGESELIEVPSGYGWHSMKVDIEFEGIVDINIHPVGEFGG EEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEEEEEEEEEEEEECCCCCC YSGFGVAGITVQ CCCCCEEEEEEC >Mature Secondary Structure MNQRVNLIYNRLILIFLLVISPAVLSASLQITWSDNSSNEDGFLVEKRLLNEDKIQNIAI CCCHHHHHHHHHHHHHHHHHCHHHEEEEEEEEECCCCCCCCCEEEEHHHCCCCCCCEEEE LPVNSQEYNDLDLVSNETYCYRITAFNKAGMGKSDEFCYQVPTDFITDEDTAANQVTAVD EECCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHH QVIAADQDTAAEQGISSVKFTGKVVLSHEIIAQVVDLEIGEKTLYSFKSDLAYNQEYTKD HHHHCCCCHHHHCCCCEEEEEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHH TLNNSSFTANVGEIRYSNEDYFSFQNQGVEIDNGYASMAFNSNNSLSFVLQGTGNKQTAR HCCCCCEEEECCEEEECCCCEEEECCCCEEEECCEEEEEECCCCCEEEEEECCCCCCEEE LYMQAGVWSDEQSNIIVTAGDQVEVITLPNGYAWHSFAIDIVFDGTVPVHIATESDRSGY EEEEECCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEEEECCEEEEEEEECCCCCCC STVMFAGIVFDKENLEKNTSVASPVFNYAAFVDIDTNFGAVIDTTDVTFYTAKAIKDNGQ EEEEEEEEEEECCCCCCCCCCCCCHHCEEEEEEECCCCCEEEECCCEEEEEEEEECCCCC LSNASLQNLSFYGEQIYRDDIYSVINDGAEINSGYQSMSWNEANGAEIKLESADQQINTA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCE SVYFIAAVWSYDAAFVELVINGESELIEVPSGYGWHSMKVDIEFEGIVDINIHPVGEFGG EEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEEEEEEEEEEEEECCCCCC YSGFGVAGITVQ CCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA