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The map label for this gene is sufB [C]

Identifier: 119945240

GI number: 119945240

Start: 1854624

End: 1856075

Strand: Reverse

Name: sufB [C]

Synonym: Ping_1508

Alternate gene names: 119945240

Gene position: 1856075-1854624 (Counterclockwise)

Preceding gene: 119945241

Following gene: 119945239

Centisome position: 40.71

GC content: 45.52

Gene sequence:

>1452_bases
ATGATGGCAAAATCACGGCAGAACTTAGATCGCTTTGTCGGCAGCGAATATCCCCATGGTTTTGTGACCGACCTGGAAAC
AGATAGCCTGCCTGCAGGTTTGAGTGAGACGGTTATAAGGCAGATATCGGCGCGCAAACATGAACCTGATTTTATGCTGC
AATGGCGTCTCAAAGCCTATCAGCATTGGTTAACTTTGAAGGTGCCAAAATGGTCAAAACTGCATTATCCGCCTATTAAT
TTTGATGAAATTGTTTTCTACAGCGCCCCGAAAACCGCTGCGGATGGCCCAAAAAGCCTCGATCAGATTGCGCCTGAAAT
TTTACAAACCTATGAAAAATTGGGCATTCCACTTCATGAACGCCCGCAGCTGGCAGGTGTTGCCGTTGATGCGGTTTTCG
ACAGTGTTTCCGTGGCAACTACCTTTAAAAAAAAATTGGCCGCAGTGGGCGTTATTTTCTGTTCATTTTCAGATGCCGTG
CAGGAGCATCCTGAACTGGTTAAACGTTATTTGGGCACGGTGGTGCCTTATACCGATAACTATTATGCGGCGCTTAATGC
CGCGGTATTTAGCGATGGTTCATTCTGTTATGTCCCCAAGGGAGTGCGTTGTCCGATGGAACTGTCCACTTATTTTCGGA
TTAATTCTCTTAATACCGGGCAGTTTGAACGCACCTTAATAGTCGTCGAAGAAGGTGCTTATGTCAGTTACCTTGAAGGC
TGCACTGCTCCGATACGGGATGAGCATCAATTACATGCAGCCGTTGTTGAATTAATTGCCCTTGATGATGGTGAGATTAA
ATATGCCACGGTGCAAAACTGGTATCCGGGTGACAAAAAGGGCAAAGGAGGGATTTACAATTTTGTTACTAAACGGGGGC
TATGCCGGGGGCATCATTCCAAAATATCCTGGACTCAGGTAGAAACTGGATCGGCCATCACCTGGAAATATCCCAGTGTT
ATTTTGCAGGGGGATAATTCGCGCGGTGAATTTTATTCTGTCGCGTTAACCAATAACTATCAACAGGCCGATACCGGCAC
TAAGATGATCCATATTGGCAAAAATACCTCCAGTACTATTATTTCCAAGGGTATTTCGGCAGGCCATGGCTCTAACGCCT
ACCGGGGGTTAGTAAAGATTGGTCCGAAAGCGGTTAATGCCCGCAATTACAGTCAATGTGATTCATTGCTGCTCGGAGAA
AATTGCGCTGCCCATACTTTCCCCTATATCGAAGTGAAAAATTCCACAGCTAAAGTAGAGCACGAGGCAAGCACCTCGAA
AATCAGTGATCAGCAGTTATTCTATTGTATGCAGCGCGGCATTTCTCAGGAAGATACGGTCGCTATGATTATTAATGGCT
TTTGTAAAACGGTGTTTCGTAAATTGCCGATGGAATTTGCAGTTGAAGCGCAGGCTTTAATGGAAGTTAGTTTGGAAGGT
TGTACCGGTTGA

Upstream 100 bases:

>100_bases
CAAGAAGTTGCCAGAAGCGCAGATAAGTTTGCAGGAAATGTTACCCGCTAAAAATCAGGTTAAAGAAATCGTCCCGAGCG
GGCATTACATAGTGGAATAA

Downstream 100 bases:

>100_bases
GTTTGCTTGAATAAGCAGGAGTCAGGGATGTTGAATATAAATAATTTACACGCAGAAATCCAAGGCAATATGATTCTAAA
AGGGTTAAATCTGTCCGTCA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MMAKSRQNLDRFVGSEYPHGFVTDLETDSLPAGLSETVIRQISARKHEPDFMLQWRLKAYQHWLTLKVPKWSKLHYPPIN
FDEIVFYSAPKTAADGPKSLDQIAPEILQTYEKLGIPLHERPQLAGVAVDAVFDSVSVATTFKKKLAAVGVIFCSFSDAV
QEHPELVKRYLGTVVPYTDNYYAALNAAVFSDGSFCYVPKGVRCPMELSTYFRINSLNTGQFERTLIVVEEGAYVSYLEG
CTAPIRDEHQLHAAVVELIALDDGEIKYATVQNWYPGDKKGKGGIYNFVTKRGLCRGHHSKISWTQVETGSAITWKYPSV
ILQGDNSRGEFYSVALTNNYQQADTGTKMIHIGKNTSSTIISKGISAGHGSNAYRGLVKIGPKAVNARNYSQCDSLLLGE
NCAAHTFPYIEVKNSTAKVEHEASTSKISDQQLFYCMQRGISQEDTVAMIINGFCKTVFRKLPMEFAVEAQALMEVSLEG
CTG

Sequences:

>Translated_483_residues
MMAKSRQNLDRFVGSEYPHGFVTDLETDSLPAGLSETVIRQISARKHEPDFMLQWRLKAYQHWLTLKVPKWSKLHYPPIN
FDEIVFYSAPKTAADGPKSLDQIAPEILQTYEKLGIPLHERPQLAGVAVDAVFDSVSVATTFKKKLAAVGVIFCSFSDAV
QEHPELVKRYLGTVVPYTDNYYAALNAAVFSDGSFCYVPKGVRCPMELSTYFRINSLNTGQFERTLIVVEEGAYVSYLEG
CTAPIRDEHQLHAAVVELIALDDGEIKYATVQNWYPGDKKGKGGIYNFVTKRGLCRGHHSKISWTQVETGSAITWKYPSV
ILQGDNSRGEFYSVALTNNYQQADTGTKMIHIGKNTSSTIISKGISAGHGSNAYRGLVKIGPKAVNARNYSQCDSLLLGE
NCAAHTFPYIEVKNSTAKVEHEASTSKISDQQLFYCMQRGISQEDTVAMIINGFCKTVFRKLPMEFAVEAQALMEVSLEG
CTG
>Mature_483_residues
MMAKSRQNLDRFVGSEYPHGFVTDLETDSLPAGLSETVIRQISARKHEPDFMLQWRLKAYQHWLTLKVPKWSKLHYPPIN
FDEIVFYSAPKTAADGPKSLDQIAPEILQTYEKLGIPLHERPQLAGVAVDAVFDSVSVATTFKKKLAAVGVIFCSFSDAV
QEHPELVKRYLGTVVPYTDNYYAALNAAVFSDGSFCYVPKGVRCPMELSTYFRINSLNTGQFERTLIVVEEGAYVSYLEG
CTAPIRDEHQLHAAVVELIALDDGEIKYATVQNWYPGDKKGKGGIYNFVTKRGLCRGHHSKISWTQVETGSAITWKYPSV
ILQGDNSRGEFYSVALTNNYQQADTGTKMIHIGKNTSSTIISKGISAGHGSNAYRGLVKIGPKAVNARNYSQCDSLLLGE
NCAAHTFPYIEVKNSTAKVEHEASTSKISDQQLFYCMQRGISQEDTVAMIINGFCKTVFRKLPMEFAVEAQALMEVSLEG
CTG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=62.4217118997912, Blast_Score=646, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=156, Percent_Identity=28.8461538461538, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53613; Mature: 53613

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAKSRQNLDRFVGSEYPHGFVTDLETDSLPAGLSETVIRQISARKHEPDFMLQWRLKAY
CCCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHH
QHWLTLKVPKWSKLHYPPINFDEIVFYSAPKTAADGPKSLDQIAPEILQTYEKLGIPLHE
CCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RPQLAGVAVDAVFDSVSVATTFKKKLAAVGVIFCSFSDAVQEHPELVKRYLGTVVPYTDN
CCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCCCC
YYAALNAAVFSDGSFCYVPKGVRCPMELSTYFRINSLNTGQFERTLIVVEEGAYVSYLEG
CHHEEEEEEECCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCEEEHHHC
CTAPIRDEHQLHAAVVELIALDDGEIKYATVQNWYPGDKKGKGGIYNFVTKRGLCRGHHS
CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCC
KISWTQVETGSAITWKYPSVILQGDNSRGEFYSVALTNNYQQADTGTKMIHIGKNTSSTI
CEEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHH
ISKGISAGHGSNAYRGLVKIGPKAVNARNYSQCDSLLLGENCAAHTFPYIEVKNSTAKVE
HHCCCCCCCCCHHHHHHEEECCHHCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEE
HEASTSKISDQQLFYCMQRGISQEDTVAMIINGFCKTVFRKLPMEFAVEAQALMEVSLEG
CCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
CTG
CCC
>Mature Secondary Structure
MMAKSRQNLDRFVGSEYPHGFVTDLETDSLPAGLSETVIRQISARKHEPDFMLQWRLKAY
CCCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHH
QHWLTLKVPKWSKLHYPPINFDEIVFYSAPKTAADGPKSLDQIAPEILQTYEKLGIPLHE
CCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RPQLAGVAVDAVFDSVSVATTFKKKLAAVGVIFCSFSDAVQEHPELVKRYLGTVVPYTDN
CCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCCCC
YYAALNAAVFSDGSFCYVPKGVRCPMELSTYFRINSLNTGQFERTLIVVEEGAYVSYLEG
CHHEEEEEEECCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCEEEHHHC
CTAPIRDEHQLHAAVVELIALDDGEIKYATVQNWYPGDKKGKGGIYNFVTKRGLCRGHHS
CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCC
KISWTQVETGSAITWKYPSVILQGDNSRGEFYSVALTNNYQQADTGTKMIHIGKNTSSTI
CEEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHH
ISKGISAGHGSNAYRGLVKIGPKAVNARNYSQCDSLLLGENCAAHTFPYIEVKNSTAKVE
HHCCCCCCCCCHHHHHHEEECCHHCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEE
HEASTSKISDQQLFYCMQRGISQEDTVAMIINGFCKTVFRKLPMEFAVEAQALMEVSLEG
CCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
CTG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]