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The map label for this gene is sufC [C]

Identifier: 119945239

GI number: 119945239

Start: 1853802

End: 1854596

Strand: Reverse

Name: sufC [C]

Synonym: Ping_1507

Alternate gene names: 119945239

Gene position: 1854596-1853802 (Counterclockwise)

Preceding gene: 119945240

Following gene: 119945238

Centisome position: 40.67

GC content: 45.03

Gene sequence:

>795_bases
ATGTTGAATATAAATAATTTACACGCAGAAATCCAAGGCAATATGATTCTAAAAGGGTTAAATCTGTCCGTCAAAAGCGG
GGAAGTTCACGCCATTATGGGGCCTAATGGTTCAGGGAAAAGTACCCTTGCTAATGTTCTGGCTGGCCATCCAGACTATC
AAGTGACAACCGGCGAAGTTATCTTTCAAGGGCGTGATTTATTGACCCTTTCCGTTGCGGAGCGCGCCTGTGCAGGTGTC
TTTGTCGCTTTTCAATATCCGCTGGAAATTCCGGGTGTCAGTAACGTGCAATTTCTTAAACTGGCACTTAACAGTCAACG
TAAATATCGTCAGCTCAGTGAGCTTGATGCTCTTGATTTTTTACAACTGGTTAAAACCAAGGTACAGCAAGTGGGCATGG
AAGAGCCACTTTTATACCGTTCGATCAATGAAGGGTTTTCTGGTGGCGAGAAAAAACGCAATGAAATCCTGCAGATGTTA
GTACTGGAACCGCAACTGGCGATCCTTGATGAAACCGATTCCGGTCTGGATATCGATGCACTAAAACTGGTGGCACAGGG
TATTAATGCCTTTCGCAATAGTGCAGATTCCGGGCAGAAGCCAGGTATTATTCTGGTCACTCATTACCAACGCCTGCTCA
ACTTTATCAATCCGGATTTTGTCCATATTCTGTTTGATGGGCGCATTGTCAAATCTGGCGGCCCCGAACTGGCCCTGGAA
TTGGAGAGAAAGGGTTATGCCGATTTATTGCCTAAGGCACCTTCCACAGAAAAAAATGCTTCTAAACAGCCTTAA

Upstream 100 bases:

>100_bases
TAAATTGCCGATGGAATTTGCAGTTGAAGCGCAGGCTTTAATGGAAGTTAGTTTGGAAGGTTGTACCGGTTGAGTTTGCT
TGAATAAGCAGGAGTCAGGG

Downstream 100 bases:

>100_bases
TATTATCTAACAAAGGCTTAAATTAAATATTGAGCCACTCAGGAGGTACAGATGAATGCCCGTGAACGTTTGCTTAAAGA
CTTTACTCGAAGCAAGAAAT

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLNINNLHAEIQGNMILKGLNLSVKSGEVHAIMGPNGSGKSTLANVLAGHPDYQVTTGEVIFQGRDLLTLSVAERACAGV
FVAFQYPLEIPGVSNVQFLKLALNSQRKYRQLSELDALDFLQLVKTKVQQVGMEEPLLYRSINEGFSGGEKKRNEILQML
VLEPQLAILDETDSGLDIDALKLVAQGINAFRNSADSGQKPGIILVTHYQRLLNFINPDFVHILFDGRIVKSGGPELALE
LERKGYADLLPKAPSTEKNASKQP

Sequences:

>Translated_264_residues
MLNINNLHAEIQGNMILKGLNLSVKSGEVHAIMGPNGSGKSTLANVLAGHPDYQVTTGEVIFQGRDLLTLSVAERACAGV
FVAFQYPLEIPGVSNVQFLKLALNSQRKYRQLSELDALDFLQLVKTKVQQVGMEEPLLYRSINEGFSGGEKKRNEILQML
VLEPQLAILDETDSGLDIDALKLVAQGINAFRNSADSGQKPGIILVTHYQRLLNFINPDFVHILFDGRIVKSGGPELALE
LERKGYADLLPKAPSTEKNASKQP
>Mature_264_residues
MLNINNLHAEIQGNMILKGLNLSVKSGEVHAIMGPNGSGKSTLANVLAGHPDYQVTTGEVIFQGRDLLTLSVAERACAGV
FVAFQYPLEIPGVSNVQFLKLALNSQRKYRQLSELDALDFLQLVKTKVQQVGMEEPLLYRSINEGFSGGEKKRNEILQML
VLEPQLAILDETDSGLDIDALKLVAQGINAFRNSADSGQKPGIILVTHYQRLLNFINPDFVHILFDGRIVKSGGPELALE
LERKGYADLLPKAPSTEKNASKQP

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI156105685, Length=262, Percent_Identity=29.0076335877863, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI255708477, Length=220, Percent_Identity=30, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI42741659, Length=219, Percent_Identity=28.7671232876712, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1787972, Length=249, Percent_Identity=59.0361445783133, Blast_Score=294, Evalue=4e-81,
Organism=Escherichia coli, GI1789864, Length=247, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786654, Length=223, Percent_Identity=30.0448430493274, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786563, Length=177, Percent_Identity=32.7683615819209, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788761, Length=240, Percent_Identity=25.4166666666667, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786698, Length=199, Percent_Identity=29.6482412060301, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787029, Length=246, Percent_Identity=25.609756097561, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787370, Length=225, Percent_Identity=25.3333333333333, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787143, Length=235, Percent_Identity=25.531914893617, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786345, Length=186, Percent_Identity=28.494623655914, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1787500, Length=220, Percent_Identity=29.5454545454545, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI87081709, Length=236, Percent_Identity=23.3050847457627, Blast_Score=60, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI71996809, Length=244, Percent_Identity=28.2786885245902, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=244, Percent_Identity=28.2786885245902, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=244, Percent_Identity=28.2786885245902, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=240, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193209708, Length=227, Percent_Identity=26.8722466960352, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=230, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=225, Percent_Identity=28.4444444444444, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=248, Percent_Identity=28.2258064516129, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI28574744, Length=229, Percent_Identity=29.2576419213974, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI281363262, Length=240, Percent_Identity=30.8333333333333, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24653245, Length=240, Percent_Identity=30.8333333333333, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161076684, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581617, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581615, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161076682, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357907, Length=241, Percent_Identity=26.9709543568465, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28904; Mature: 28904

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNINNLHAEIQGNMILKGLNLSVKSGEVHAIMGPNGSGKSTLANVLAGHPDYQVTTGEV
CCCCCCEEEEEECCEEEEECCEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECEE
IFQGRDLLTLSVAERACAGVFVAFQYPLEIPGVSNVQFLKLALNSQRKYRQLSELDALDF
EECCCCEEEEHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
LQLVKTKVQQVGMEEPLLYRSINEGFSGGEKKRNEILQMLVLEPQLAILDETDSGLDIDA
HHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
LKLVAQGINAFRNSADSGQKPGIILVTHYQRLLNFINPDFVHILFDGRIVKSGGPELALE
HHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCEEEECCCCCEEEE
LERKGYADLLPKAPSTEKNASKQP
ECCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNINNLHAEIQGNMILKGLNLSVKSGEVHAIMGPNGSGKSTLANVLAGHPDYQVTTGEV
CCCCCCEEEEEECCEEEEECCEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECEE
IFQGRDLLTLSVAERACAGVFVAFQYPLEIPGVSNVQFLKLALNSQRKYRQLSELDALDF
EECCCCEEEEHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
LQLVKTKVQQVGMEEPLLYRSINEGFSGGEKKRNEILQMLVLEPQLAILDETDSGLDIDA
HHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
LKLVAQGINAFRNSADSGQKPGIILVTHYQRLLNFINPDFVHILFDGRIVKSGGPELALE
HHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCEEEECCCCCEEEE
LERKGYADLLPKAPSTEKNASKQP
ECCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]