| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is lutA1 [H]
Identifier: 119945157
GI number: 119945157
Start: 1745579
End: 1746331
Strand: Reverse
Name: lutA1 [H]
Synonym: Ping_1421
Alternate gene names: 119945157
Gene position: 1746331-1745579 (Counterclockwise)
Preceding gene: 119945158
Following gene: 119945156
Centisome position: 38.3
GC content: 46.22
Gene sequence:
>753_bases ATGCGAATCTACCCTGCAAAACCGGTCAAAGTATACTTCTATGCGACTTGTCTGGTTGACCTGTTTGATCCACAAGCCGG TCTTGATGCCATCACATTGTTAGAGCAACAGGGGATCGAGGTTATCTTCATTGAAAAACAAACTTGCTGTGGTCAGCCAG CTTATAGCTCAGGTTACGATCAAGAAGCTAAAATAATCGCGCAAAGCCAGATGGACTTGTTCACGGAAAACTGGCCGGTG ATCGTTTTATCAGGGTCTTGTGGCGGTATGATGCATTATCACTATCGGCGTTTATTCAAAGATGATCAAAACCAAACCCA GGTTGATGATTTTTGCGAGCGTGTCTTTGAACTGACTGAATTTCTGGTCAACGTCTGCCGGATAAAATTGAAGGATCAGG GAGAAAATACTTCGGTTGTGATGCATACCTCCTGTGCGGCACGTCGGGAGATGAATGTCCACGTGACGTCGACACAACTG CTTAGCCAGCTTGATAACGTCAAGATTCGGGAGCAGGATTATGAAAGTGAATGTTGCGGATTCGGTGGTACTTTTGCGGT TCGTCATTCCGATATCAGTCAGGCAATGGTTGAGGATAAAACGCGCCACTTGTCAGAAACAAAAGCCAGTAATTTTGTCA GTGCCGATTGGGGCTGCCTGCTGAATATTAACGGCTCGCTGGAATATCAGGGCAACCCAATGCGTGGTCGTCATCTTGCG AGCTTTTTATTAGAACGCACGGGAGGAAAATAG
Upstream 100 bases:
>100_bases AATAACGACGAATTCGAATGACTTTTTTATTCGCAACTTATTAACGCCAACAGTCACTGACTACCAACGACAGACACAGT GGCAGCAAAAGGAAAAACCA
Downstream 100 bases:
>100_bases AATGGACCAAGCAAAGAATAATATCGACCATATTGAAAGTCTGTCTCATGTTCAAGCGCACAGGAGAGCGAGCTTCTTAT TAGCACACTTCTTATTAGCA
Product: cysteine-rich domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MRIYPAKPVKVYFYATCLVDLFDPQAGLDAITLLEQQGIEVIFIEKQTCCGQPAYSSGYDQEAKIIAQSQMDLFTENWPV IVLSGSCGGMMHYHYRRLFKDDQNQTQVDDFCERVFELTEFLVNVCRIKLKDQGENTSVVMHTSCAARREMNVHVTSTQL LSQLDNVKIREQDYESECCGFGGTFAVRHSDISQAMVEDKTRHLSETKASNFVSADWGCLLNINGSLEYQGNPMRGRHLA SFLLERTGGK
Sequences:
>Translated_250_residues MRIYPAKPVKVYFYATCLVDLFDPQAGLDAITLLEQQGIEVIFIEKQTCCGQPAYSSGYDQEAKIIAQSQMDLFTENWPV IVLSGSCGGMMHYHYRRLFKDDQNQTQVDDFCERVFELTEFLVNVCRIKLKDQGENTSVVMHTSCAARREMNVHVTSTQL LSQLDNVKIREQDYESECCGFGGTFAVRHSDISQAMVEDKTRHLSETKASNFVSADWGCLLNINGSLEYQGNPMRGRHLA SFLLERTGGK >Mature_250_residues MRIYPAKPVKVYFYATCLVDLFDPQAGLDAITLLEQQGIEVIFIEKQTCCGQPAYSSGYDQEAKIIAQSQMDLFTENWPV IVLSGSCGGMMHYHYRRLFKDDQNQTQVDDFCERVFELTEFLVNVCRIKLKDQGENTSVVMHTSCAARREMNVHVTSTQL LSQLDNVKIREQDYESECCGFGGTFAVRHSDISQAMVEDKTRHLSETKASNFVSADWGCLLNINGSLEYQGNPMRGRHLA SFLLERTGGK
Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutA/ykgE family [H]
Homologues:
Organism=Escherichia coli, GI1786497, Length=241, Percent_Identity=33.195020746888, Blast_Score=141, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004017 - InterPro: IPR022822 [H]
Pfam domain/function: PF02754 CCG [H]
EC number: NA
Molecular weight: Translated: 28309; Mature: 28309
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIYPAKPVKVYFYATCLVDLFDPQAGLDAITLLEQQGIEVIFIEKQTCCGQPAYSSGYD CCCCCCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC QEAKIIAQSQMDLFTENWPVIVLSGSCGGMMHYHYRRLFKDDQNQTQVDDFCERVFELTE CHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FLVNVCRIKLKDQGENTSVVMHTSCAARREMNVHVTSTQLLSQLDNVKIREQDYESECCG HHHHHHHEEEECCCCCCEEEEEECHHHHCCCEEEEHHHHHHHHHHCCEEECCCCCHHHCC FGGTFAVRHSDISQAMVEDKTRHLSETKASNFVSADWGCLLNINGSLEYQGNPMRGRHLA CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCEEEECCCCCCHHHHH SFLLERTGGK HHHHHHCCCC >Mature Secondary Structure MRIYPAKPVKVYFYATCLVDLFDPQAGLDAITLLEQQGIEVIFIEKQTCCGQPAYSSGYD CCCCCCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC QEAKIIAQSQMDLFTENWPVIVLSGSCGGMMHYHYRRLFKDDQNQTQVDDFCERVFELTE CHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FLVNVCRIKLKDQGENTSVVMHTSCAARREMNVHVTSTQLLSQLDNVKIREQDYESECCG HHHHHHHEEEECCCCCCEEEEEECHHHHCCCEEEEHHHHHHHHHHCCEEECCCCCHHHCC FGGTFAVRHSDISQAMVEDKTRHLSETKASNFVSADWGCLLNINGSLEYQGNPMRGRHLA CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCEEEECCCCCCHHHHH SFLLERTGGK HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA