| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945127
Identifier: 119945127
GI number: 119945127
Start: 1707469
End: 1708359
Strand: Direct
Name: 119945127
Synonym: Ping_1389
Alternate gene names: NA
Gene position: 1707469-1708359 (Clockwise)
Preceding gene: 119945126
Following gene: 119945131
Centisome position: 37.45
GC content: 38.05
Gene sequence:
>891_bases ATGGAAATTACTCTTTGGGATTATAGTAATATAATATCCAAGTGGTTGATATATATTGGGATAGCCGCAGCGATTGGCGG CCCTTTTATTGCCGCTTTAATAAATGCCACTGTTAATAAAAAGTCGCTTCTTAATTATATTGTCATCAGTAGTGTGTTAG GTTTTGCCGCGGTCATCATAAACTTTTTCATTCAGGTTGGTGCCTTTTCTGAAACTGGCTTATCAGGTATGTTTGATACT GGATTGATAAGCTTTCTTTGGCAAAGTGCGGTGGGTGATTCTGTTTTATGGCGTTTGCTCGCCTTTACCGTTTTAGGCTT TGCATTATTGTGGAGCAATCTTAATGCCAAATACGGCACCTTTAGTTTCAAAGATGCAACTTTCACATTTTTATATGCGG CAGCTGTTTTTAGCTTTGCCTATTCATTTACCTTTATAGGTCACAGTGCCGTTATAGGTGGGGCCGCAAAGTGGTTGCTG GCTTTTCATATTATCACTGTGTCTTGGTGGGTAGGTGCACTATACCCTTTATGGCTTAGTTGCAAATTATTGCCGCCACC TGTGCTGTATAAGTTGATGTGCTTATTTGGTAAAATTGCGATCTTTATGGTGGGCATTTTAATCGCTTGTGGCATAGGTT TGTTATATTTATTTTTAGAAAATCCACTGGCGTTATTGACCACAACCTATGGTCTGGCCATGCTGCTAAAACTGATTTTT GTTGGCAGTATTTTGTTAATTGCCGCTTACCATAAATTTCGACTTGTAGAAGAAATTCAACAACAAGCAGGCATCAAAAA ACTACAAAAATCAATAAAGAATGAAATGCTAATTGCAGTGGTGATTTTAACTATTACTGCTGTGTTATCATCGATTTTAG GCCCTGAATAA
Upstream 100 bases:
>100_bases AACTGCAAGGAGACATTCCCTTCACGGTTAAGGACGCTGGTATGGCAAAAACACCTGCTATTTCAGACGCTGATAATGAT GCTTAGTTAGGGTGTCTATG
Downstream 100 bases:
>100_bases CTTAGCTTAAAGCCATGCGTAACTTTAGAGTTGCAGTGGCTTATTTTAAGTAAGATTAAGATATTGGCAAGTATGCCTAA TCTATGCGCTCATCGCGTAC
Product: copper resistance D domain-containing protein
Products: NA
Alternate protein names: Copper Export Protein; Copper Resistance D Domain-Containing Protein; Copper Resistance D Domain Protein; Copper Resistance Protein D
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MEITLWDYSNIISKWLIYIGIAAAIGGPFIAALINATVNKKSLLNYIVISSVLGFAAVIINFFIQVGAFSETGLSGMFDT GLISFLWQSAVGDSVLWRLLAFTVLGFALLWSNLNAKYGTFSFKDATFTFLYAAAVFSFAYSFTFIGHSAVIGGAAKWLL AFHIITVSWWVGALYPLWLSCKLLPPPVLYKLMCLFGKIAIFMVGILIACGIGLLYLFLENPLALLTTTYGLAMLLKLIF VGSILLIAAYHKFRLVEEIQQQAGIKKLQKSIKNEMLIAVVILTITAVLSSILGPE
Sequences:
>Translated_296_residues MEITLWDYSNIISKWLIYIGIAAAIGGPFIAALINATVNKKSLLNYIVISSVLGFAAVIINFFIQVGAFSETGLSGMFDT GLISFLWQSAVGDSVLWRLLAFTVLGFALLWSNLNAKYGTFSFKDATFTFLYAAAVFSFAYSFTFIGHSAVIGGAAKWLL AFHIITVSWWVGALYPLWLSCKLLPPPVLYKLMCLFGKIAIFMVGILIACGIGLLYLFLENPLALLTTTYGLAMLLKLIF VGSILLIAAYHKFRLVEEIQQQAGIKKLQKSIKNEMLIAVVILTITAVLSSILGPE >Mature_296_residues MEITLWDYSNIISKWLIYIGIAAAIGGPFIAALINATVNKKSLLNYIVISSVLGFAAVIINFFIQVGAFSETGLSGMFDT GLISFLWQSAVGDSVLWRLLAFTVLGFALLWSNLNAKYGTFSFKDATFTFLYAAAVFSFAYSFTFIGHSAVIGGAAKWLL AFHIITVSWWVGALYPLWLSCKLLPPPVLYKLMCLFGKIAIFMVGILIACGIGLLYLFLENPLALLTTTYGLAMLLKLIF VGSILLIAAYHKFRLVEEIQQQAGIKKLQKSIKNEMLIAVVILTITAVLSSILGPE
Specific function: Unknown
COG id: COG1276
COG function: function code P; Putative copper export protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32438; Mature: 32438
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITLWDYSNIISKWLIYIGIAAAIGGPFIAALINATVNKKSLLNYIVISSVLGFAAVII CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NFFIQVGAFSETGLSGMFDTGLISFLWQSAVGDSVLWRLLAFTVLGFALLWSNLNAKYGT HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC FSFKDATFTFLYAAAVFSFAYSFTFIGHSAVIGGAAKWLLAFHIITVSWWVGALYPLWLS CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CKLLPPPVLYKLMCLFGKIAIFMVGILIACGIGLLYLFLENPLALLTTTYGLAMLLKLIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VGSILLIAAYHKFRLVEEIQQQAGIKKLQKSIKNEMLIAVVILTITAVLSSILGPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEITLWDYSNIISKWLIYIGIAAAIGGPFIAALINATVNKKSLLNYIVISSVLGFAAVII CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NFFIQVGAFSETGLSGMFDTGLISFLWQSAVGDSVLWRLLAFTVLGFALLWSNLNAKYGT HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC FSFKDATFTFLYAAAVFSFAYSFTFIGHSAVIGGAAKWLLAFHIITVSWWVGALYPLWLS CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CKLLPPPVLYKLMCLFGKIAIFMVGILIACGIGLLYLFLENPLALLTTTYGLAMLLKLIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VGSILLIAAYHKFRLVEEIQQQAGIKKLQKSIKNEMLIAVVILTITAVLSSILGPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA