| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945108
Identifier: 119945108
GI number: 119945108
Start: 1684901
End: 1686214
Strand: Direct
Name: 119945108
Synonym: Ping_1368
Alternate gene names: NA
Gene position: 1684901-1686214 (Clockwise)
Preceding gene: 119945107
Following gene: 119945109
Centisome position: 36.95
GC content: 39.5
Gene sequence:
>1314_bases ATGATGAAAATCACCTCATATGTTTTATTAAAAAACCATTTTGCTGTTAATAGACTATTTAACAGCCTGTTTAGTTTAAC GTTTTTGTTTAGTTTTAATCTTTTTGCACAGGGCATTAGTCTTCATGATGCCTCGCTGATGGCGATTAAATCCGACCCCG CACAGCAAATTTATCAATCCCAACAAGCTGCATTGATTGCACAGGGCATTGCCGGATCGACGCTGGCCGACCCTATGATT AAGCTTGGCATGGCTAACGTGCCGACGGATAGTTTTCAATTAGATAAAGATCCTATGACCCAAATCACGGTTGGCTTATC ACAACAATTTAGCCGTGGTTCGCAACGTGAATTGACTCAGGAAGGCTTTAATCAACGCGCTGATATGACGGTTTCTTTAG GGTTAGATCGCAAGTTAACTGTTAAAAAAAGCGTGCGTGAGCTGTGGCTTAAAATTCTGTTTATTGATAAATCATTACGA ATAGTAAAAGAAAATAAAAAACTCTTTTCAGGTTTTTACCAAGATTTGCAGGCGAAATTTTCTTTAGGACTTACTGAGCA CGAAGATTTAATTTTAGCAGAAATTGAGATCAGTAAATTTGATGAAAAAATTGCTGCGTTAAATCAACAATCACTTAATT ATCGCAGTTTGTTAAGTGAGCATATCGGCGAATATGCCTATCAGACACTGCCGAGTGCAATACCGCAATGGCCAGAAACC CTGTCCTATGTAAAGGCCGTTAATGCCAATAATACCGAGCATTATGAATTGCTTAGCAATCACCCCAAAGCCCAAATGTT AGTGCAGAGTATAACACTGGCGGATAACGGTATCGAACTTGCTGAGCAGAATTACAAACCCGCTTTTAAACTGGAAGTGG GTTACGGACATCGCTTAAGTGAGACTGATATGGGCAAACCAAGATCGGATCTATTGAGCGCTTTTGTGTCTATGGATATT CCGTTATTTACCGATAAACGCCAAGATCAAAAACTTATCTCTGCGCAATATAACAAAGGGCAAAAGCAAGCTGAACATCG TTTGTTATTGCGCCAGCTTAATGCCTTATTAAATGCTGAAATCAGTAATTATCAGCAACTTCAAGCGCGTCAAATTCGTT ACCAGGATAGTCTTCTGAAACAGGCTAAACTGCATACCAGACTGTTAGAGCAAAGTTATCAATCTAATACGCGCCCTTTC AAAGATGTTATTGATGCCTATATCCACGAGCAGAACCTGACCTTAGAATATCAACAACTGTATTTCGATGGCCTTAAAAG CCTGTCTAACATCCGTTATTTCCAGGCACTTTAA
Upstream 100 bases:
>100_bases TTATTTTTACCGAACTCCTGTATTTAAAGCTTCTTATTGTTCTTTTTTTGAAAAAAGAGATGAGTTGGCAATAAAAAGGA GTTCGTAATAAAGGAAAGTG
Downstream 100 bases:
>100_bases TAGGAAAATATTATGCGTTACTTTTTAGTTTTAATTGTTGGTTTATTTTTGGGGATCGTCGCTACCAAGAATCAGCAAAT CAATAGTTTGTTTAGTGCAA
Product: copper/silver resistance outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein; Cation Efflux Protein; Outer Membrane Cation Efflux Protein; CzcC Family Heavy Metal RND Efflux Outer Membrane Protein; Copper/Silver Resistance Outer Membrane Protein; Heavy Metal RND Efflux CzcC Family; Outer Membrane Silver Efflux Protein; Outer Membrane Protein lC; Outer Membrane Heavy Metal Efflux Protein; RND Family Metal Ion Efflux Pump Outer Membrane Protein
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MMKITSYVLLKNHFAVNRLFNSLFSLTFLFSFNLFAQGISLHDASLMAIKSDPAQQIYQSQQAALIAQGIAGSTLADPMI KLGMANVPTDSFQLDKDPMTQITVGLSQQFSRGSQRELTQEGFNQRADMTVSLGLDRKLTVKKSVRELWLKILFIDKSLR IVKENKKLFSGFYQDLQAKFSLGLTEHEDLILAEIEISKFDEKIAALNQQSLNYRSLLSEHIGEYAYQTLPSAIPQWPET LSYVKAVNANNTEHYELLSNHPKAQMLVQSITLADNGIELAEQNYKPAFKLEVGYGHRLSETDMGKPRSDLLSAFVSMDI PLFTDKRQDQKLISAQYNKGQKQAEHRLLLRQLNALLNAEISNYQQLQARQIRYQDSLLKQAKLHTRLLEQSYQSNTRPF KDVIDAYIHEQNLTLEYQQLYFDGLKSLSNIRYFQAL
Sequences:
>Translated_437_residues MMKITSYVLLKNHFAVNRLFNSLFSLTFLFSFNLFAQGISLHDASLMAIKSDPAQQIYQSQQAALIAQGIAGSTLADPMI KLGMANVPTDSFQLDKDPMTQITVGLSQQFSRGSQRELTQEGFNQRADMTVSLGLDRKLTVKKSVRELWLKILFIDKSLR IVKENKKLFSGFYQDLQAKFSLGLTEHEDLILAEIEISKFDEKIAALNQQSLNYRSLLSEHIGEYAYQTLPSAIPQWPET LSYVKAVNANNTEHYELLSNHPKAQMLVQSITLADNGIELAEQNYKPAFKLEVGYGHRLSETDMGKPRSDLLSAFVSMDI PLFTDKRQDQKLISAQYNKGQKQAEHRLLLRQLNALLNAEISNYQQLQARQIRYQDSLLKQAKLHTRLLEQSYQSNTRPF KDVIDAYIHEQNLTLEYQQLYFDGLKSLSNIRYFQAL >Mature_437_residues MMKITSYVLLKNHFAVNRLFNSLFSLTFLFSFNLFAQGISLHDASLMAIKSDPAQQIYQSQQAALIAQGIAGSTLADPMI KLGMANVPTDSFQLDKDPMTQITVGLSQQFSRGSQRELTQEGFNQRADMTVSLGLDRKLTVKKSVRELWLKILFIDKSLR IVKENKKLFSGFYQDLQAKFSLGLTEHEDLILAEIEISKFDEKIAALNQQSLNYRSLLSEHIGEYAYQTLPSAIPQWPET LSYVKAVNANNTEHYELLSNHPKAQMLVQSITLADNGIELAEQNYKPAFKLEVGYGHRLSETDMGKPRSDLLSAFVSMDI PLFTDKRQDQKLISAQYNKGQKQAEHRLLLRQLNALLNAEISNYQQLQARQIRYQDSLLKQAKLHTRLLEQSYQSNTRPF KDVIDAYIHEQNLTLEYQQLYFDGLKSLSNIRYFQAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49979; Mature: 49979
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKITSYVLLKNHFAVNRLFNSLFSLTFLFSFNLFAQGISLHDASLMAIKSDPAQQIYQS CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHH QQAALIAQGIAGSTLADPMIKLGMANVPTDSFQLDKDPMTQITVGLSQQFSRGSQRELTQ HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH EGFNQRADMTVSLGLDRKLTVKKSVRELWLKILFIDKSLRIVKENKKLFSGFYQDLQAKF HHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SLGLTEHEDLILAEIEISKFDEKIAALNQQSLNYRSLLSEHIGEYAYQTLPSAIPQWPET HCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH LSYVKAVNANNTEHYELLSNHPKAQMLVQSITLADNGIELAEQNYKPAFKLEVGYGHRLS HHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCCCC ETDMGKPRSDLLSAFVSMDIPLFTDKRQDQKLISAQYNKGQKQAEHRLLLRQLNALLNAE CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ISNYQQLQARQIRYQDSLLKQAKLHTRLLEQSYQSNTRPFKDVIDAYIHEQNLTLEYQQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHH YFDGLKSLSNIRYFQAL HHHHHHHHHHHHHHHCC >Mature Secondary Structure MMKITSYVLLKNHFAVNRLFNSLFSLTFLFSFNLFAQGISLHDASLMAIKSDPAQQIYQS CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHH QQAALIAQGIAGSTLADPMIKLGMANVPTDSFQLDKDPMTQITVGLSQQFSRGSQRELTQ HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH EGFNQRADMTVSLGLDRKLTVKKSVRELWLKILFIDKSLRIVKENKKLFSGFYQDLQAKF HHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SLGLTEHEDLILAEIEISKFDEKIAALNQQSLNYRSLLSEHIGEYAYQTLPSAIPQWPET HCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH LSYVKAVNANNTEHYELLSNHPKAQMLVQSITLADNGIELAEQNYKPAFKLEVGYGHRLS HHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCCCC ETDMGKPRSDLLSAFVSMDIPLFTDKRQDQKLISAQYNKGQKQAEHRLLLRQLNALLNAE CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ISNYQQLQARQIRYQDSLLKQAKLHTRLLEQSYQSNTRPFKDVIDAYIHEQNLTLEYQQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHH YFDGLKSLSNIRYFQAL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA