| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945004
Identifier: 119945004
GI number: 119945004
Start: 1566934
End: 1567245
Strand: Direct
Name: 119945004
Synonym: Ping_1256
Alternate gene names: NA
Gene position: 1566934-1567245 (Clockwise)
Preceding gene: 119945003
Following gene: 119945005
Centisome position: 34.37
GC content: 42.63
Gene sequence:
>312_bases ATGACTGCTGCGAAAAGAAAAACGCTTAGAGGGCTTGCAGATATCCGCACTATAAGTTCATGTGGTACATCAGGGCAAGA AGCTTATCAGATGTACCTGAAGCGCGGGGTTCTGGAGATGGAGAAACTCCGACGCCAAAAAGAAAAGAACAGTGCGCTTG AACGAGTAACGAATATTAATCGTCGTCTAATGGCTATTGATACTGACATCGATTTTCTGTGCCAGAGCTTGAAAGTGATA GAAAAGCGCACAAATCAAGAGAACTCGATTGTCGAAAAATCAGTCAGTAGAGGATTTAAACTCCGTTATTGA
Upstream 100 bases:
>100_bases AGATCTCATTATGAAATTTTGTCCTGCGACGTACAAGTCATCAGGGTCTAAAATCAGGGCCTAAAATGGTAAAGTCAACT CAATAATAAGGTGATTCGTT
Downstream 100 bases:
>100_bases AGTATACCTTATGTTTTTTTAAGCAATTTAAGATTTTTTTTGGTACTCTATCGGAAATACTTACAAAGTGTTTCCGATAG AGTACCTACTTGACTAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTAAKRKTLRGLADIRTISSCGTSGQEAYQMYLKRGVLEMEKLRRQKEKNSALERVTNINRRLMAIDTDIDFLCQSLKVI EKRTNQENSIVEKSVSRGFKLRY
Sequences:
>Translated_103_residues MTAAKRKTLRGLADIRTISSCGTSGQEAYQMYLKRGVLEMEKLRRQKEKNSALERVTNINRRLMAIDTDIDFLCQSLKVI EKRTNQENSIVEKSVSRGFKLRY >Mature_102_residues TAAKRKTLRGLADIRTISSCGTSGQEAYQMYLKRGVLEMEKLRRQKEKNSALERVTNINRRLMAIDTDIDFLCQSLKVIE KRTNQENSIVEKSVSRGFKLRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11929; Mature: 11798
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAKRKTLRGLADIRTISSCGTSGQEAYQMYLKRGVLEMEKLRRQKEKNSALERVTNIN CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLMAIDTDIDFLCQSLKVIEKRTNQENSIVEKSVSRGFKLRY HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TAAKRKTLRGLADIRTISSCGTSGQEAYQMYLKRGVLEMEKLRRQKEKNSALERVTNIN CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLMAIDTDIDFLCQSLKVIEKRTNQENSIVEKSVSRGFKLRY HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA