| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is gvpN [H]
Identifier: 119945003
GI number: 119945003
Start: 1565893
End: 1566897
Strand: Direct
Name: gvpN [H]
Synonym: Ping_1255
Alternate gene names: 119945003
Gene position: 1565893-1566897 (Clockwise)
Preceding gene: 119945002
Following gene: 119945004
Centisome position: 34.34
GC content: 44.28
Gene sequence:
>1005_bases ATGAGCATAGAAAACCTGAATAATGTATCGGAGATTAAGATTGAACAATCCGACGACGATCATATTTATCCTGAAGCCAG TGAAGATTTCGTAGAAACACCTTATATAAAAGAAGTAACGGAACGCGCTATGCTTTATTTAGACGCGGGTTACCCCGTCC ATTTTGCAGGCCCAGCAGGAACAGGAAAGACCACACTGGCATTCCATATCGCGGCACTGCGACAACGTCCGGTTACGTTG ATTCATGGTAATCATGAATTTGGAACTTCTGACTTAATCGGTAAGGAATCAGGTTATCGGAGACATCGAGTAGTAGATAA TTATGTTCACTCGGTAGTTAAAGAAGAAGAAGAGTTACAGAGTCTGTGGAGTGATAACCGTCTGACTACCTGCTGCCGTA ATGGTGACACATTGGTCTATGACGAGTTTAACCGTTCAACACCGGAAGCCAATAACGTATTGCTCAGTATCCTAGAAGAG GGAATATTGAATTTACCGAGCTCGCGCAGTGATGGTTATCTTGAAGTTCATCCTCAGTTCAGAGCTATTTTCACCTCAAA TCCGCAAGAGTATGCAGGTACTCATGCTACTCAGGATGCGTTGGTTGATCGTATGATTACCATCATGCTTCATTACCCCG ATCGACATACTGAAGTGCGCGTTGCCATTGCCAAATCTGGTATCAACAGCGATGAGGCCGGATCTATCGTCGATATTGTT AATGAATTTCGTGAGTTATGTGGTAGTAAAATAGTATCCAGCGGCCCGAAGACGATGCCGACGGTTCGTGCTTCGATTGC CATTGCTCGCGTTCTGGTCCAGAAGGGCGAGCATGCTTTTCGTGACAATACATTCTTTCACCGTATCTGCCGTGATGTCC TGTGCATGTATACTCAACAGGTATCCTTTTCCAACCGATCTGTCTTGGATAAACAACTAGAAGATCTCATTATGAAATTT TGTCCTGCGACGTACAAGTCATCAGGGTCTAAAATCAGGGCCTAA
Upstream 100 bases:
>100_bases CCACCGAAGACCAGAAATGTTTGAATAATAAATAGTGTTCATCTAAGCCGGTAACGGAAGCTAACATTCAAACAATAATA ATACTAGCGAGTATAAAGAC
Downstream 100 bases:
>100_bases AATGGTAAAGTCAACTCAATAATAAGGTGATTCGTTATGACTGCTGCGAAAAGAAAAACGCTTAGAGGGCTTGCAGATAT CCGCACTATAAGTTCATGTG
Product: gas vesicle protein GvpN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSIENLNNVSEIKIEQSDDDHIYPEASEDFVETPYIKEVTERAMLYLDAGYPVHFAGPAGTGKTTLAFHIAALRQRPVTL IHGNHEFGTSDLIGKESGYRRHRVVDNYVHSVVKEEEELQSLWSDNRLTTCCRNGDTLVYDEFNRSTPEANNVLLSILEE GILNLPSSRSDGYLEVHPQFRAIFTSNPQEYAGTHATQDALVDRMITIMLHYPDRHTEVRVAIAKSGINSDEAGSIVDIV NEFRELCGSKIVSSGPKTMPTVRASIAIARVLVQKGEHAFRDNTFFHRICRDVLCMYTQQVSFSNRSVLDKQLEDLIMKF CPATYKSSGSKIRA
Sequences:
>Translated_334_residues MSIENLNNVSEIKIEQSDDDHIYPEASEDFVETPYIKEVTERAMLYLDAGYPVHFAGPAGTGKTTLAFHIAALRQRPVTL IHGNHEFGTSDLIGKESGYRRHRVVDNYVHSVVKEEEELQSLWSDNRLTTCCRNGDTLVYDEFNRSTPEANNVLLSILEE GILNLPSSRSDGYLEVHPQFRAIFTSNPQEYAGTHATQDALVDRMITIMLHYPDRHTEVRVAIAKSGINSDEAGSIVDIV NEFRELCGSKIVSSGPKTMPTVRASIAIARVLVQKGEHAFRDNTFFHRICRDVLCMYTQQVSFSNRSVLDKQLEDLIMKF CPATYKSSGSKIRA >Mature_333_residues SIENLNNVSEIKIEQSDDDHIYPEASEDFVETPYIKEVTERAMLYLDAGYPVHFAGPAGTGKTTLAFHIAALRQRPVTLI HGNHEFGTSDLIGKESGYRRHRVVDNYVHSVVKEEEELQSLWSDNRLTTCCRNGDTLVYDEFNRSTPEANNVLLSILEEG ILNLPSSRSDGYLEVHPQFRAIFTSNPQEYAGTHATQDALVDRMITIMLHYPDRHTEVRVAIAKSGINSDEAGSIVDIVN EFRELCGSKIVSSGPKTMPTVRASIAIARVLVQKGEHAFRDNTFFHRICRDVLCMYTQQVSFSNRSVLDKQLEDLIMKFC PATYKSSGSKIRA
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Vacuole, gas vesicle [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR013462 [H]
Pfam domain/function: PF07728 AAA_5 [H]
EC number: NA
Molecular weight: Translated: 37589; Mature: 37458
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIENLNNVSEIKIEQSDDDHIYPEASEDFVETPYIKEVTERAMLYLDAGYPVHFAGPAG CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHEEEEECCCCEEECCCCC TGKTTLAFHIAALRQRPVTLIHGNHEFGTSDLIGKESGYRRHRVVDNYVHSVVKEEEELQ CCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLWSDNRLTTCCRNGDTLVYDEFNRSTPEANNVLLSILEEGILNLPSSRSDGYLEVHPQF HHHCCCCEEEHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCE RAIFTSNPQEYAGTHATQDALVDRMITIMLHYPDRHTEVRVAIAKSGINSDEAGSIVDIV EEEECCCCHHHHCCCHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCCCCCCHHHHHH NEFRELCGSKIVSSGPKTMPTVRASIAIARVLVQKGEHAFRDNTFFHRICRDVLCMYTQQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHH VSFSNRSVLDKQLEDLIMKFCPATYKSSGSKIRA HCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCC >Mature Secondary Structure SIENLNNVSEIKIEQSDDDHIYPEASEDFVETPYIKEVTERAMLYLDAGYPVHFAGPAG CCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHEEEEECCCCEEECCCCC TGKTTLAFHIAALRQRPVTLIHGNHEFGTSDLIGKESGYRRHRVVDNYVHSVVKEEEELQ CCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLWSDNRLTTCCRNGDTLVYDEFNRSTPEANNVLLSILEEGILNLPSSRSDGYLEVHPQF HHHCCCCEEEHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCE RAIFTSNPQEYAGTHATQDALVDRMITIMLHYPDRHTEVRVAIAKSGINSDEAGSIVDIV EEEECCCCHHHHCCCHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCCCCCCHHHHHH NEFRELCGSKIVSSGPKTMPTVRASIAIARVLVQKGEHAFRDNTFFHRICRDVLCMYTQQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHH VSFSNRSVLDKQLEDLIMKFCPATYKSSGSKIRA HCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA