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The map label for this gene is ydgJ [H]

Identifier: 119944993

GI number: 119944993

Start: 1552401

End: 1553441

Strand: Reverse

Name: ydgJ [H]

Synonym: Ping_1244

Alternate gene names: 119944993

Gene position: 1553441-1552401 (Counterclockwise)

Preceding gene: 119945025

Following gene: 119944992

Centisome position: 34.07

GC content: 41.98

Gene sequence:

>1041_bases
ATGAACACGCGTGTTATTAAGACCGCCATCATCGGATATGGTTTCTCTGCAAAAACATTTCACCTTCCTTTTATCGAGTC
ACTGCCGGAGTTTGAAGTGTCGGCAATCAGCAGCAGTCAAATTGACGCGGTTAAACAAGATTGGCCAAATACGGCACATT
ATTTAAGCGCAGAGGAGATGCTGCAAAAGAGTGATACTCAGCTAGTTATTATTACCGCGCCTAACGATGTCCATTTTTCA
CTCGCTAAATTGGCACTGGAAAATAATAAACACGTGATATTAGAAAAACCCTTTGTGACTAACGTTGCTGATGGTCAAAC
CCTGATCGCTCTGGCAAAAGAAAAAGGGTTGATATTAAGTGTCTACCACAATCGGCGCTGGGATGGTGATTTTCTGACTA
TTAAAAAATTAATGGCAGAAAAAAAACTGGGTAATATTAAACATTTTGAATCACACTTTGACCGTTTCAGGCCAAACGTT
GTTCAACGCTGGCGTGAAAATACTCAAGATGGTGGCGGTATCTTATTTGATTTGGGCCCCCATTTAATTGACCAGGCATT
GCAGCTATTCGGATTACCCGACGCTATCACCGCGCAATGTAAAATAATGCGGGAAGGTGCTACCAATATTGATTATTTTA
ACTTAACCCTGCACTACCGGGATAAACTCGCGCTATTAAGTGCTTCATTATTTTGTGCCGCGCCAAACTTACGTTTTAAT
ATTCAAGGCGATCGGGCTAACTACAGAAAATGGGGACTGGATCCGCAGGAAGATAGATTAAAAGCAGGCGTGCTGCCTAA
GACTACTGACTGGGGTCAGGAAAACCGGGATCAATATGGCCATTTATACTTCGAAGACTCATCACAGGTTGCTAAAACAG
AGCTTGGTGGTTATCAACATTTTTTTGTGCAAATGGCGAAGGCCATTAATAGCGGCGCTAAACCTCCCGTATTGGCAGAA
GATGCATTGTGGAATATTAAACTGATTAAATTAGCGATGGAAAGCAGCCGCTTAGGAAAAACAATGAAGGTTGAATTATG
A

Upstream 100 bases:

>100_bases
CATCACGGTCCAATATCAACTACCCGGGACATTAAACAATATTGAAGAGCAGGTCCGGGTGGTCAATAAAATCAATAAAG
GAGCAACAATGAGCAATAAA

Downstream 100 bases:

>100_bases
ATGAGGAGTATTCACTGCAGGATTTATTAGGTCAGGAAAGCGAACTGCAATTTGCATTCTTTAATAATCAGACCGCCTGG
AAATTAGGCTGTCAATTAAA

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNTRVIKTAIIGYGFSAKTFHLPFIESLPEFEVSAISSSQIDAVKQDWPNTAHYLSAEEMLQKSDTQLVIITAPNDVHFS
LAKLALENNKHVILEKPFVTNVADGQTLIALAKEKGLILSVYHNRRWDGDFLTIKKLMAEKKLGNIKHFESHFDRFRPNV
VQRWRENTQDGGGILFDLGPHLIDQALQLFGLPDAITAQCKIMREGATNIDYFNLTLHYRDKLALLSASLFCAAPNLRFN
IQGDRANYRKWGLDPQEDRLKAGVLPKTTDWGQENRDQYGHLYFEDSSQVAKTELGGYQHFFVQMAKAINSGAKPPVLAE
DALWNIKLIKLAMESSRLGKTMKVEL

Sequences:

>Translated_346_residues
MNTRVIKTAIIGYGFSAKTFHLPFIESLPEFEVSAISSSQIDAVKQDWPNTAHYLSAEEMLQKSDTQLVIITAPNDVHFS
LAKLALENNKHVILEKPFVTNVADGQTLIALAKEKGLILSVYHNRRWDGDFLTIKKLMAEKKLGNIKHFESHFDRFRPNV
VQRWRENTQDGGGILFDLGPHLIDQALQLFGLPDAITAQCKIMREGATNIDYFNLTLHYRDKLALLSASLFCAAPNLRFN
IQGDRANYRKWGLDPQEDRLKAGVLPKTTDWGQENRDQYGHLYFEDSSQVAKTELGGYQHFFVQMAKAINSGAKPPVLAE
DALWNIKLIKLAMESSRLGKTMKVEL
>Mature_346_residues
MNTRVIKTAIIGYGFSAKTFHLPFIESLPEFEVSAISSSQIDAVKQDWPNTAHYLSAEEMLQKSDTQLVIITAPNDVHFS
LAKLALENNKHVILEKPFVTNVADGQTLIALAKEKGLILSVYHNRRWDGDFLTIKKLMAEKKLGNIKHFESHFDRFRPNV
VQRWRENTQDGGGILFDLGPHLIDQALQLFGLPDAITAQCKIMREGATNIDYFNLTLHYRDKLALLSASLFCAAPNLRFN
IQGDRANYRKWGLDPQEDRLKAGVLPKTTDWGQENRDQYGHLYFEDSSQVAKTELGGYQHFFVQMAKAINSGAKPPVLAE
DALWNIKLIKLAMESSRLGKTMKVEL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=341, Percent_Identity=42.8152492668622, Blast_Score=293, Evalue=9e-81,
Organism=Escherichia coli, GI1789848, Length=340, Percent_Identity=33.2352941176471, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1787574, Length=199, Percent_Identity=25.6281407035176, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI145693182, Length=234, Percent_Identity=24.3589743589744, Blast_Score=66, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581117, Length=225, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39145; Mature: 39145

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRVIKTAIIGYGFSAKTFHLPFIESLPEFEVSAISSSQIDAVKQDWPNTAHYLSAEEM
CCCEEEEEEEEECCCCCCEEECCHHHCCCCCHHHHCCCHHHHHHHHCCCCHHHHCCHHHH
LQKSDTQLVIITAPNDVHFSLAKLALENNKHVILEKPFVTNVADGQTLIALAKEKGLILS
HHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEE
VYHNRRWDGDFLTIKKLMAEKKLGNIKHFESHFDRFRPNVVQRWRENTQDGGGILFDLGP
EECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCH
HLIDQALQLFGLPDAITAQCKIMREGATNIDYFNLTLHYRDKLALLSASLFCAAPNLRFN
HHHHHHHHHHCCCHHHHHHHHEEECCCCCCEEEEEEEEECCHHHHHHHHHHEECCCCEEE
IQGDRANYRKWGLDPQEDRLKAGVLPKTTDWGQENRDQYGHLYFEDSSQVAKTELGGYQH
EECCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCHHH
FFVQMAKAINSGAKPPVLAEDALWNIKLIKLAMESSRLGKTMKVEL
HHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEHHHHHCCCEEEEEC
>Mature Secondary Structure
MNTRVIKTAIIGYGFSAKTFHLPFIESLPEFEVSAISSSQIDAVKQDWPNTAHYLSAEEM
CCCEEEEEEEEECCCCCCEEECCHHHCCCCCHHHHCCCHHHHHHHHCCCCHHHHCCHHHH
LQKSDTQLVIITAPNDVHFSLAKLALENNKHVILEKPFVTNVADGQTLIALAKEKGLILS
HHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEE
VYHNRRWDGDFLTIKKLMAEKKLGNIKHFESHFDRFRPNVVQRWRENTQDGGGILFDLGP
EECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCH
HLIDQALQLFGLPDAITAQCKIMREGATNIDYFNLTLHYRDKLALLSASLFCAAPNLRFN
HHHHHHHHHHCCCHHHHHHHHEEECCCCCCEEEEEEEEECCHHHHHHHHHHEECCCCEEE
IQGDRANYRKWGLDPQEDRLKAGVLPKTTDWGQENRDQYGHLYFEDSSQVAKTELGGYQH
EECCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCHHH
FFVQMAKAINSGAKPPVLAEDALWNIKLIKLAMESSRLGKTMKVEL
HHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]