Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119944992

Identifier: 119944992

GI number: 119944992

Start: 1551925

End: 1552404

Strand: Reverse

Name: 119944992

Synonym: Ping_1243

Alternate gene names: NA

Gene position: 1552404-1551925 (Counterclockwise)

Preceding gene: 119944993

Following gene: 119944990

Centisome position: 34.05

GC content: 39.58

Gene sequence:

>480_bases
ATGAATGAGGAGTATTCACTGCAGGATTTATTAGGTCAGGAAAGCGAACTGCAATTTGCATTCTTTAATAATCAGACCGC
CTGGAAATTAGGCTGTCAATTAAAAAAAATAGCCGAGGATAACAGTACTCTGGTAGCCATTGAAGTGTATGCCTTTAGCC
AAACTTTATTTAGTTATGCTATGTCTGGCACACAACTTGATAATCAAATCTGGATAAAACGAAAACGGCAGACTGTATTA
CGTTTTGGTCACAGCTCTTATTATATTGGTCAATACAATAAAGCTAAAAACAGAGAATTTGAACAGCAGGTGCATATTAA
TGCTGATGATTATTGCGCCCATGGAGGGGCATTCCCGATTAGGATAAAAAAATGTGGTTTGGTGGGGGTGGTGACAGTCT
CTGGCCTTCCGCAACGGGAAGATCATCAGATGGTCATTGACGCCCTCACTGATTTAATTAAATCAGTGCAAAAGAGCTAA

Upstream 100 bases:

>100_bases
CTAAACCTCCCGTATTGGCAGAAGATGCATTGTGGAATATTAAACTGATTAAATTAGCGATGGAAAGCAGCCGCTTAGGA
AAAACAATGAAGGTTGAATT

Downstream 100 bases:

>100_bases
AAACCTTAACTACCCTGCTTGTTAATTCCCCGATGGCAGCTGCTTAAATGGATACGCGTTAGAGCAGCTAAGCGGACGGT
TTATCAATATTAATTAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYAMSGTQLDNQIWIKRKRQTVL
RFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPIRIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS

Sequences:

>Translated_159_residues
MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYAMSGTQLDNQIWIKRKRQTVL
RFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPIRIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS
>Mature_159_residues
MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYAMSGTQLDNQIWIKRKRQTVL
RFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPIRIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS

Specific function: Unknown

COG id: COG4702

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0303 family

Homologues:

Organism=Saccharomyces cerevisiae, GI6319613, Length=149, Percent_Identity=33.5570469798658, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1243_PSYIN (A1SUA8)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_942672.1
- ProteinModelPortal:   A1SUA8
- STRING:   A1SUA8
- GeneID:   4625000
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_1243
- eggNOG:   COG4702
- HOGENOM:   HBG367719
- OMA:   TNEDALQ
- PhylomeDB:   A1SUA8
- ProtClustDB:   CLSK2487533
- BioCyc:   PING357804:PING_1243-MONOMER
- HAMAP:   MF_00761
- InterPro:   IPR005624
- InterPro:   IPR010371
- PIRSF:   PIRSF008757

Pfam domain/function: PF03928 DUF336

EC number: NA

Molecular weight: Translated: 18146; Mature: 18146

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYA
CCCCCCHHHHCCCCCCEEEEEECCCEEEECCCHHHHHCCCCCEEEEEEEHHHHHHHHHHH
MSGTQLDNQIWIKRKRQTVLRFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPI
HCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEEECCCCCCCCCCCCCEE
RIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS
EEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYA
CCCCCCHHHHCCCCCCEEEEEECCCEEEECCCHHHHHCCCCCEEEEEEEHHHHHHHHHHH
MSGTQLDNQIWIKRKRQTVLRFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPI
HCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEEECCCCCCCCCCCCCEE
RIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS
EEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA