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The map label for this gene is rpfG [H]

Identifier: 119944986

GI number: 119944986

Start: 1543680

End: 1544540

Strand: Direct

Name: rpfG [H]

Synonym: Ping_1237

Alternate gene names: 119944986

Gene position: 1543680-1544540 (Clockwise)

Preceding gene: 119944985

Following gene: 119944987

Centisome position: 33.86

GC content: 38.68

Gene sequence:

>861_bases
ATGAACTTAAAACCACACTATCAAATCGTCTTGGTGTATCTGATCGTCGGAATATTATGGATATCTTTATCTGACTGGGC
CGTAGCCTTATTATTTCAAGATAGTGATAATATTATTGTTGCACAGAACATTAAAGGATGGAGTTTTATTGCCATCACTG
CGTTGCTTTTGTTTTTTCTTATCAGAAAAAAAATGAATGCAGTCACAGAAATAAACACCCAATTAGTTGAAAGTTATGAA
CACACCATGAGTGGCTGGGTTCATCTTATCGATCTTCGTCATCGGGAGACAAAAAATCATACTGAACGGGTGACCAAAAT
GACCCTTAAGCTGACAAAACTGTTTGGCATTACTGATCCGGTTGAACTTAATCACATTAAGTGGGGAGCCATGCTTCATG
ATCTAGGAAAAATTGCTCTGAGTGATAATGTTTTAACTAAACCGGGGAAACTCGATTCAGCAGAGTGGGCGGAAATGAAA
ATGCACCCGCAAATAGCCCATGATATTTTATCTACCATTGATTATCTTATTCCCTGCAGAGACATTCCCTATTGCCACCA
TGAAAAGTGGGATGGTAGCGGTTACCCTCAAGGTATAAAAGGAGATGCAATACCAATAACAGCCAGAATTTTCGCTGTTA
TTGATGTATGGGATGCCCTTATTCATTCTCGGGTATATAAATCTGGCTGGCCGGAAGAAAAAGTGCTGCAGCATATTAAA
GAGCAGTCAGGCAGTCATTTTGATCCGGATATAGTTAAATTATTTTTAGAAAACTATAGTGAGATAAAAGAAAGTTTGAG
GGTTACTGATGCTCCGACGTCACAAAATAGCATTACAACCGATAGCATACAGGCCTGTTAA

Upstream 100 bases:

>100_bases
TTGAACATGCGTTAACGCATTGTTTGATAACATTACCTTGCTATAAAATGTTTTTTATTTATTAAGCAGATAAAGTTGTA
AATTGTTAGCCGGGAGTTAA

Downstream 100 bases:

>100_bases
AACCATTTTTAATTAAGCTAGTTGGTTAGATTTTGGCATTGTTAGGTGTGTATTAGCACGTCTAATTAACCTTTTGGTGT
GATCCTTATAATGATAAAAA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MNLKPHYQIVLVYLIVGILWISLSDWAVALLFQDSDNIIVAQNIKGWSFIAITALLLFFLIRKKMNAVTEINTQLVESYE
HTMSGWVHLIDLRHRETKNHTERVTKMTLKLTKLFGITDPVELNHIKWGAMLHDLGKIALSDNVLTKPGKLDSAEWAEMK
MHPQIAHDILSTIDYLIPCRDIPYCHHEKWDGSGYPQGIKGDAIPITARIFAVIDVWDALIHSRVYKSGWPEEKVLQHIK
EQSGSHFDPDIVKLFLENYSEIKESLRVTDAPTSQNSITTDSIQAC

Sequences:

>Translated_286_residues
MNLKPHYQIVLVYLIVGILWISLSDWAVALLFQDSDNIIVAQNIKGWSFIAITALLLFFLIRKKMNAVTEINTQLVESYE
HTMSGWVHLIDLRHRETKNHTERVTKMTLKLTKLFGITDPVELNHIKWGAMLHDLGKIALSDNVLTKPGKLDSAEWAEMK
MHPQIAHDILSTIDYLIPCRDIPYCHHEKWDGSGYPQGIKGDAIPITARIFAVIDVWDALIHSRVYKSGWPEEKVLQHIK
EQSGSHFDPDIVKLFLENYSEIKESLRVTDAPTSQNSITTDSIQAC
>Mature_286_residues
MNLKPHYQIVLVYLIVGILWISLSDWAVALLFQDSDNIIVAQNIKGWSFIAITALLLFFLIRKKMNAVTEINTQLVESYE
HTMSGWVHLIDLRHRETKNHTERVTKMTLKLTKLFGITDPVELNHIKWGAMLHDLGKIALSDNVLTKPGKLDSAEWAEMK
MHPQIAHDILSTIDYLIPCRDIPYCHHEKWDGSGYPQGIKGDAIPITARIFAVIDVWDALIHSRVYKSGWPEEKVLQHIK
EQSGSHFDPDIVKLFLENYSEIKESLRVTDAPTSQNSITTDSIQAC

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 32663; Mature: 32663

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKPHYQIVLVYLIVGILWISLSDWAVALLFQDSDNIIVAQNIKGWSFIAITALLLFFL
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHH
IRKKMNAVTEINTQLVESYEHTMSGWVHLIDLRHRETKNHTERVTKMTLKLTKLFGITDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VELNHIKWGAMLHDLGKIALSDNVLTKPGKLDSAEWAEMKMHPQIAHDILSTIDYLIPCR
CEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
DIPYCHHEKWDGSGYPQGIKGDAIPITARIFAVIDVWDALIHSRVYKSGWPEEKVLQHIK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EQSGSHFDPDIVKLFLENYSEIKESLRVTDAPTSQNSITTDSIQAC
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MNLKPHYQIVLVYLIVGILWISLSDWAVALLFQDSDNIIVAQNIKGWSFIAITALLLFFL
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHH
IRKKMNAVTEINTQLVESYEHTMSGWVHLIDLRHRETKNHTERVTKMTLKLTKLFGITDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VELNHIKWGAMLHDLGKIALSDNVLTKPGKLDSAEWAEMKMHPQIAHDILSTIDYLIPCR
CEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
DIPYCHHEKWDGSGYPQGIKGDAIPITARIFAVIDVWDALIHSRVYKSGWPEEKVLQHIK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EQSGSHFDPDIVKLFLENYSEIKESLRVTDAPTSQNSITTDSIQAC
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]