Click here to switch to the map view.

The map label for this gene is uspA [H]

Identifier: 119944983

GI number: 119944983

Start: 1539197

End: 1539613

Strand: Direct

Name: uspA [H]

Synonym: Ping_1234

Alternate gene names: 119944983

Gene position: 1539197-1539613 (Clockwise)

Preceding gene: 119944982

Following gene: 119944984

Centisome position: 33.76

GC content: 37.17

Gene sequence:

>417_bases
ATGAGTTATAAACATGTATTGGTTGCCATTGATTTGACTGAAGCTAGCGATATAGTCATAAGCAAAGCGGTATCCTTAGC
TAAAAATTTAGATGCAAAACTTTCTTTTATCTCTATTGATATTTCACATCCAGATCCGGACAGGATTTACGATCCGCTTG
AGGTTAAATTAATTGAGCAAAACCGCGAAAAATTAACCGCTAAGTTGAAGGAACTCGCTGAGTTAACCAATTATCCGATT
ACTACTACTAAGGTGGTAGGGGGGGATGTGGAGGAAACATTAATGCGGGAAATTACCAAGATTAAGGCCGATTTATTAGT
TTGTGGGCATCACCATGGCTTTTGGAATCGTTGGTGGTCTTCTGCACGTAAATTGGTCAATATAACAATCGTTGATTTAT
TACTTATTCATCTTTAA

Upstream 100 bases:

>100_bases
GGACAAAAATAAGAGAATAAAATCATCATAAGGAGACGATAAATATTATTGTTCACAATCACTGATTTTATTGTTAATAA
ACAGAGTTTGGAGAAATAAA

Downstream 100 bases:

>100_bases
GTTCGGTCTCAGTGGCTAATGGATATTGGCCACTAGATTGATGGGTGCTATAAGTTTTTATTTATAATGGATAAAAACCT
TAAACTAGGGGGCCTTGACA

Product: universal stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSYKHVLVAIDLTEASDIVISKAVSLAKNLDAKLSFISIDISHPDPDRIYDPLEVKLIEQNREKLTAKLKELAELTNYPI
TTTKVVGGDVEETLMREITKIKADLLVCGHHHGFWNRWWSSARKLVNITIVDLLLIHL

Sequences:

>Translated_138_residues
MSYKHVLVAIDLTEASDIVISKAVSLAKNLDAKLSFISIDISHPDPDRIYDPLEVKLIEQNREKLTAKLKELAELTNYPI
TTTKVVGGDVEETLMREITKIKADLLVCGHHHGFWNRWWSSARKLVNITIVDLLLIHL
>Mature_137_residues
SYKHVLVAIDLTEASDIVISKAVSLAKNLDAKLSFISIDISHPDPDRIYDPLEVKLIEQNREKLTAKLKELAELTNYPIT
TTKVVGGDVEETLMREITKIKADLLVCGHHHGFWNRWWSSARKLVNITIVDLLLIHL

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1789909, Length=142, Percent_Identity=40.1408450704225, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI1790358, Length=138, Percent_Identity=36.9565217391304, Blast_Score=87, Evalue=3e-19,
Organism=Escherichia coli, GI1788205, Length=143, Percent_Identity=31.4685314685315, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: 1660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 290 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4003 Molecules/Cell In: Growth Phase, G

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15654; Mature: 15523

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKHVLVAIDLTEASDIVISKAVSLAKNLDAKLSFISIDISHPDPDRIYDPLEVKLIEQ
CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHEEEHHH
NREKLTAKLKELAELTNYPITTTKVVGGDVEETLMREITKIKADLLVCGHHHGFWNRWWS
HHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH
SARKLVNITIVDLLLIHL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYKHVLVAIDLTEASDIVISKAVSLAKNLDAKLSFISIDISHPDPDRIYDPLEVKLIEQ
CCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHEEEHHH
NREKLTAKLKELAELTNYPITTTKVVGGDVEETLMREITKIKADLLVCGHHHGFWNRWWS
HHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH
SARKLVNITIVDLLLIHL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]