| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is gsp [H]
Identifier: 119944984
GI number: 119944984
Start: 1539855
End: 1541744
Strand: Direct
Name: gsp [H]
Synonym: Ping_1235
Alternate gene names: 119944984
Gene position: 1539855-1541744 (Clockwise)
Preceding gene: 119944983
Following gene: 119944985
Centisome position: 33.77
GC content: 43.6
Gene sequence:
>1890_bases TTGAATTATAAATCCCCTTCTGTATTTGGTACGTTACTCGGTTATGCGCCAGGTGGTGTTGCTGCCTACTCCTCTGATTA TGATACAGCCAGCGATATAAAATACCCCAAACGAAGCGCCTTTCGCAGTTATTTTAATGGTATTTATATGGGCTATAAAT GGCAGTGTGTTGAATTTGCCCGGCGTTGGATGTATATCAATAAGGGGACTCTTTTTGATGATGTGGCCATGGCCTATGAG ATATTTGACTTACGTACGGTGAGAAATCTTGCAACTAATAGCCTGCTGCCCTTACAGGCATTTTGTAATGGCAGTAAAAG CTTGCCGCAGCCGGGCAGTTTGTTAATTTGGGATCAGGGGGGAGAGTTCGCAGAAACCGGTCATGTTGCCATTGTTACCG AGGTATTTCCCGATAAATTACGTATTGTGGAGCAAAATTTAGATCACCAAATTTGGCCTGAGGGGCACTCTTTTAGCCGA GAACTTCCCGCGACGACTACCGAAGAAGGTGAGTATTGGTTAAAATGCTCCTTTAATGATGCCACTATTTTAGGCTGGAT GACACAAACCGAGGATGATCGCGATGCCGAGCCGACTCTAGAAACCAATAAGCAGTTATTTAATTTAATCAGCCGCCGGG CAAAAGAGCAGCCCAACCCGCAAAAATCTTGGCTTAATGTTGCTAATGAGGATGAGGCCGCTTATGTGAAGGCGATGCAT GGCCATAAACTTAGCGCGGTTACAGCGGATCAATATCGTTATTATGTTTTGTCGGAAACCGCACAGCATGCATTACAGCG AGCTGCCAATGAGTTGCATGCTTTATTTATGCATGCCACGGATTATGTGTTGGAAAACCAAGCGCTATTAAATAAATTTA ATTTACCTGTCGCGATTTTACCCAAAATACGTCAGTCATGGGATAACCGTTTAAATGAACTAATTACCAGTCGTTTTGAC TTTGCCATGACCCCACAAGGGTTAAAGGTCTATGAGTACAATTGTGATTCAGCCTCCTGTTATATGGAAAGTGCCAAAAT TCAGGGTAAATGGGCTCGCCATTATGGTGTTCAGGAAGGACAGGACAGTGGCAAAGATCTTTTTAATCATCTGGTTAACG CATGGCGTAAAAGTCAGGCAAAAGGACTGGTGCATATTTTGCATGATAATGACCCAGAAGAAAAATACCATGCGTTATTT ATACAGCAAACATTAAAATCGGCAGGGCTCGAGAGTAAGCTTATCTCTGCTATAAGCAGTCTGCGATGGAATAGTTCGGG TGATATCTTAGATGAGGAAGGGCAATTAATTCACTGGGTGTGGAAAACCTGGTCCTGGGAAACGGCTCTGGGTCAAATTC GTGCACAATGTGAAGTGGATCAAGCGCTTGCGGAAAAATATCAACCTCTGTGGCAACAGGTTAGTCCCCCGCGTCTGGCG GATGTATTACTGCATAAAAATATTATGATTTTTGAGCCGTTATGGACCCTCATCCCCAGTAATAAAGCAATTCTTCCTGT GCTTTGGTCACTCTTCCCAAATCATCCTCTGTTATTGCATACTAATTTTGTTTTAAATGCTGATTTACAGGCGAGCGGTT ATGTCAGTAAGCCAATTGTTGGGCGCTGCGGGGCCAACATTCAGGTGGTAAATCATCACGAAGATATTCTTGAGGAGACG GGAGGGCAATTTTCGGCACAGGATCAAATCTATCAGGCATTATTTCCACTGCCACTGGTGGATGGTTATTATGTACAGGT CTGCGCCTTTACGGCCGCTGGTAAATATGCGGGCAGTTGTCTGCGTGTTGACTCCTCGATGATCATCAGTAAAGACAGTG ATTGTATGGCATTACGTTTTGTAAATGATGATCATATTCTAAGTCAATAA
Upstream 100 bases:
>100_bases ATTGAACTTGAGCTAAGGCTTTAAAATGGTGTCAATTTATATTGCCAATGCAAATTGACTTATTTATATTTTTTGTTAAT ACCTGATATAGGCTAAAATT
Downstream 100 bases:
>100_bases TAGGGTATTGATGACATTTTTTACAATACTTCCAGGGTGATTATGGGCTTAGCACTGGGTATTGCCAACAAAAATTCCAT TAGTTTATAGCGAATAATCT
Product: bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase
Products: NA
Alternate protein names: Glutathionylspermidine synthase; GSP synthetase; Glutathione:spermidine ligase [ADP-forming]; Glutathionylspermidine amidase; Glutathionylspermidine amidohydrolase [spermidine-forming]; GSP amidase [H]
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MNYKSPSVFGTLLGYAPGGVAAYSSDYDTASDIKYPKRSAFRSYFNGIYMGYKWQCVEFARRWMYINKGTLFDDVAMAYE IFDLRTVRNLATNSLLPLQAFCNGSKSLPQPGSLLIWDQGGEFAETGHVAIVTEVFPDKLRIVEQNLDHQIWPEGHSFSR ELPATTTEEGEYWLKCSFNDATILGWMTQTEDDRDAEPTLETNKQLFNLISRRAKEQPNPQKSWLNVANEDEAAYVKAMH GHKLSAVTADQYRYYVLSETAQHALQRAANELHALFMHATDYVLENQALLNKFNLPVAILPKIRQSWDNRLNELITSRFD FAMTPQGLKVYEYNCDSASCYMESAKIQGKWARHYGVQEGQDSGKDLFNHLVNAWRKSQAKGLVHILHDNDPEEKYHALF IQQTLKSAGLESKLISAISSLRWNSSGDILDEEGQLIHWVWKTWSWETALGQIRAQCEVDQALAEKYQPLWQQVSPPRLA DVLLHKNIMIFEPLWTLIPSNKAILPVLWSLFPNHPLLLHTNFVLNADLQASGYVSKPIVGRCGANIQVVNHHEDILEET GGQFSAQDQIYQALFPLPLVDGYYVQVCAFTAAGKYAGSCLRVDSSMIISKDSDCMALRFVNDDHILSQ
Sequences:
>Translated_629_residues MNYKSPSVFGTLLGYAPGGVAAYSSDYDTASDIKYPKRSAFRSYFNGIYMGYKWQCVEFARRWMYINKGTLFDDVAMAYE IFDLRTVRNLATNSLLPLQAFCNGSKSLPQPGSLLIWDQGGEFAETGHVAIVTEVFPDKLRIVEQNLDHQIWPEGHSFSR ELPATTTEEGEYWLKCSFNDATILGWMTQTEDDRDAEPTLETNKQLFNLISRRAKEQPNPQKSWLNVANEDEAAYVKAMH GHKLSAVTADQYRYYVLSETAQHALQRAANELHALFMHATDYVLENQALLNKFNLPVAILPKIRQSWDNRLNELITSRFD FAMTPQGLKVYEYNCDSASCYMESAKIQGKWARHYGVQEGQDSGKDLFNHLVNAWRKSQAKGLVHILHDNDPEEKYHALF IQQTLKSAGLESKLISAISSLRWNSSGDILDEEGQLIHWVWKTWSWETALGQIRAQCEVDQALAEKYQPLWQQVSPPRLA DVLLHKNIMIFEPLWTLIPSNKAILPVLWSLFPNHPLLLHTNFVLNADLQASGYVSKPIVGRCGANIQVVNHHEDILEET GGQFSAQDQIYQALFPLPLVDGYYVQVCAFTAAGKYAGSCLRVDSSMIISKDSDCMALRFVNDDHILSQ >Mature_629_residues MNYKSPSVFGTLLGYAPGGVAAYSSDYDTASDIKYPKRSAFRSYFNGIYMGYKWQCVEFARRWMYINKGTLFDDVAMAYE IFDLRTVRNLATNSLLPLQAFCNGSKSLPQPGSLLIWDQGGEFAETGHVAIVTEVFPDKLRIVEQNLDHQIWPEGHSFSR ELPATTTEEGEYWLKCSFNDATILGWMTQTEDDRDAEPTLETNKQLFNLISRRAKEQPNPQKSWLNVANEDEAAYVKAMH GHKLSAVTADQYRYYVLSETAQHALQRAANELHALFMHATDYVLENQALLNKFNLPVAILPKIRQSWDNRLNELITSRFD FAMTPQGLKVYEYNCDSASCYMESAKIQGKWARHYGVQEGQDSGKDLFNHLVNAWRKSQAKGLVHILHDNDPEEKYHALF IQQTLKSAGLESKLISAISSLRWNSSGDILDEEGQLIHWVWKTWSWETALGQIRAQCEVDQALAEKYQPLWQQVSPPRLA DVLLHKNIMIFEPLWTLIPSNKAILPVLWSLFPNHPLLLHTNFVLNADLQASGYVSKPIVGRCGANIQVVNHHEDILEET GGQFSAQDQIYQALFPLPLVDGYYVQVCAFTAAGKYAGSCLRVDSSMIISKDSDCMALRFVNDDHILSQ
Specific function: Catalyzes the formation of an amide bond between glutathione and spermidine coupled with hydrolysis of ATP; also catalyzes the hydrolysis of glutathionylspermidine to glutathione and spermidine [H]
COG id: COG0754
COG function: function code E; Glutathionylspermidine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase C51 domain [H]
Homologues:
Organism=Escherichia coli, GI1789361, Length=613, Percent_Identity=47.6345840130506, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI1789416, Length=364, Percent_Identity=26.6483516483516, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790629, Length=382, Percent_Identity=25.6544502617801, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007921 - InterPro: IPR005494 - InterPro: IPR016185 [H]
Pfam domain/function: PF05257 CHAP; PF03738 GSP_synth [H]
EC number: =6.3.1.8; =3.5.1.78 [H]
Molecular weight: Translated: 71402; Mature: 71402
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKSPSVFGTLLGYAPGGVAAYSSDYDTASDIKYPKRSAFRSYFNGIYMGYKWQCVEFA CCCCCCHHHHHHHHCCCCCCEEECCCCCCHHCCCCCHHHHHHHHHCCEECCCEEHHHHHH RRWMYINKGTLFDDVAMAYEIFDLRTVRNLATNSLLPLQAFCNGSKSLPQPGSLLIWDQG HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEECCC GEFAETGHVAIVTEVFPDKLRIVEQNLDHQIWPEGHSFSRELPATTTEEGEYWLKCSFND CCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC ATILGWMTQTEDDRDAEPTLETNKQLFNLISRRAKEQPNPQKSWLNVANEDEAAYVKAMH CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHC GHKLSAVTADQYRYYVLSETAQHALQRAANELHALFMHATDYVLENQALLNKFNLPVAIL CCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEH PKIRQSWDNRLNELITSRFDFAMTPQGLKVYEYNCDSASCYMESAKIQGKWARHYGVQEG HHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCC QDSGKDLFNHLVNAWRKSQAKGLVHILHDNDPEEKYHALFIQQTLKSAGLESKLISAISS CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LRWNSSGDILDEEGQLIHWVWKTWSWETALGQIRAQCEVDQALAEKYQPLWQQVSPPRLA HCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH DVLLHKNIMIFEPLWTLIPSNKAILPVLWSLFPNHPLLLHTNFVLNADLQASGYVSKPIV HHHHHCCEEEECHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCH GRCGANIQVVNHHEDILEETGGQFSAQDQIYQALFPLPLVDGYYVQVCAFTAAGKYAGSC HHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHCCHHCCCE LRVDSSMIISKDSDCMALRFVNDDHILSQ EEECCCEEEECCCCEEEEEEECCCCCCCC >Mature Secondary Structure MNYKSPSVFGTLLGYAPGGVAAYSSDYDTASDIKYPKRSAFRSYFNGIYMGYKWQCVEFA CCCCCCHHHHHHHHCCCCCCEEECCCCCCHHCCCCCHHHHHHHHHCCEECCCEEHHHHHH RRWMYINKGTLFDDVAMAYEIFDLRTVRNLATNSLLPLQAFCNGSKSLPQPGSLLIWDQG HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEECCC GEFAETGHVAIVTEVFPDKLRIVEQNLDHQIWPEGHSFSRELPATTTEEGEYWLKCSFND CCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC ATILGWMTQTEDDRDAEPTLETNKQLFNLISRRAKEQPNPQKSWLNVANEDEAAYVKAMH CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHC GHKLSAVTADQYRYYVLSETAQHALQRAANELHALFMHATDYVLENQALLNKFNLPVAIL CCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEH PKIRQSWDNRLNELITSRFDFAMTPQGLKVYEYNCDSASCYMESAKIQGKWARHYGVQEG HHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCC QDSGKDLFNHLVNAWRKSQAKGLVHILHDNDPEEKYHALFIQQTLKSAGLESKLISAISS CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LRWNSSGDILDEEGQLIHWVWKTWSWETALGQIRAQCEVDQALAEKYQPLWQQVSPPRLA HCCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH DVLLHKNIMIFEPLWTLIPSNKAILPVLWSLFPNHPLLLHTNFVLNADLQASGYVSKPIV HHHHHCCEEEECHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCH GRCGANIQVVNHHEDILEETGGQFSAQDQIYQALFPLPLVDGYYVQVCAFTAAGKYAGSC HHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHCCHHCCCE LRVDSSMIISKDSDCMALRFVNDDHILSQ EEECCCEEEECCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7775463; 9278503 [H]