| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is hscA [H]
Identifier: 119944982
GI number: 119944982
Start: 1535896
End: 1538715
Strand: Direct
Name: hscA [H]
Synonym: Ping_1233
Alternate gene names: 119944982
Gene position: 1535896-1538715 (Clockwise)
Preceding gene: 119944981
Following gene: 119944983
Centisome position: 33.68
GC content: 46.63
Gene sequence:
>2820_bases ATGAATAATCTTGTTGTTAAATATCTGATTGGTATCGATTTAGGCACCACCAATACCGTGGTTGCCTATACTGATATGCT TAAGCCGTTAACCTCAGATAACTGCCATATATTTGAAATTGAACAGTTAGTTGCTCCAGGCGAAGTGGCTAAACGGCCTT TATTACCTTCATTTCGTTATCATCCGGCCGGCGGCGAAATCAACCCTATTGATTTACAACTACCTTGGTCTGATGTTGCC GTCGATAAACTCGAGGGGGAGTTGCCCCTGGTCGTTATCGGGGAATGGGCAAGAGAGTTGGGTGCAAAGGTTGATGGCCG TCAGGTCGTTAGTGCTAAAAGTTGGCTCTCTCATCCCCATGTTGATCGTAATGCGGATATTCTCCCCTGGGCGGGTGCAG AAGGGGTTGCCAAAGTATCTCCGGTATTGGCTTCTGCGAGTTATTTATTGCATGTACGCCATGCCTGGAATTTTGCCCAT CCCGATGCGCTGATGGAAGATCAGGAAGTGGTTATTACTATCCCCGCTTCATTTGATGAGGGAGCAAGGGCGCTTACCGT CGAGGCCGCAAGTCGGGCTGGTCTGGTTAATATTTTATTGCTTGAGGAGCCCCAAGCCGTTTGTTATGACTGGTATGCAA GGCAGGGTGCGAGAGTACAAAGAGAACTGGCTAAAATAAAGTTATTAATGGTTTGTGATGTGGGTGGTGGTACGACGGAT CTCAGTCTGATTAAAGTGGCTCAGGGTAAAGATAATTCTCTGGCACTGACACGTATTGGTGTGGGTAATCATCTTATGCT TGGTGGGGATAATGTTGATTTGGCACTGGCACATATTGCAGAGGGGCTTATTAATGGTGGAACATCAGCCAATAAAAAAC TCAGTGCAGCAAATTTATCGCAATTAATACAGCAAACACGAAAAGCAAAAGAGTTACTGATGGGAGACGATGCTCCGGGC AGCGCCAGAGTAACTGTCTTAGGCAGTGGAGCAAAACTAATAGGCGGCGCTAAAAGCTGTGAACTGACTAAGCAGGCCGT GAGAGATATTGCGCTTGATGGTTTTTTCCCCAATATCAGCTTCGATCAGCGGCCACTTAAAAGGCGTAGTGCTGTTGTCG AATTTGGACTTCCTTATGCTGCCGATCCTGCAGTCAGCAAGCATGTTGCAGAATTTATCGCCGATCACCAAATAGCCTGC AAAGATGCACTAGGCATCGATTCCACTCAATCGGGGCATGCTATTCCCGATGCGGTATTATTTAATGGGGGGGTTTTTAA TAGCGCAGTACTCAGTGAGCGCACCATTGAGCTGTTAAGTGAATGGCGTGGCAGTGCGGTAAATAGATTGGAAAACCATC ATCCTAACCTGGCTGTTGCACAGGGAGCGGTGGCCTATGCGAGGGCGCGTCGCGGTGCCCAACTTAAAATTGGAGGCGGT TCGGCGCGGACAGTCTTTCTTGTACTTGAGCAGCAAGATGCGGGTAAACAAGCCATTTGTTTAATGCCTAAAGGCACGGA AGAAGAGCAAGAGCTTACGCTTAGCGAAAGAAAATTTTCACTACAGTTAGGTTTACCTGTTCAGTTTCATCTCTTTTCAA CGACTGCCGATCAGGGGTATAAAATCGGTGAAATTATTACCCTTGATGAACAGACTCTGGCCAGCGGGCGTTTTATTTCA CTGCCGCCGCTGGTTGTTGTATTAGAAAAAACCACCTTAGACTCGGTTATTGTGTCCTTGGCAACCAGGTTTACCGAAGT TGGCACGCTGAAAATAGATTGCGTGGCGGAAAACCAGCAACGTTGGCATCTCGAATTTCAAATCCGACAGCCACTATCAC AGCGAACAGCAACGGATAAAACAGATGCACTGCCCGACTGTTTTGACCAGGTCAGGGAGAAAGTTGATCTGGTCTTTGGT GAGAGTAAAAAACAAATCACCCCCAAGGCGGTTAAAAGTTTACGTGCTGATATTGAAAAACTATTGGGCAAGCGTGAACA CTGGGAGCTTCCCTTGCTGCGAGCCTTGTTTGATCAGTTATTGGAAGGTAAAAATCATCGCCGTCGCTCAGCGGCCCATG AGCGGATCTGGTTTAATCTGGCTGGTTATTGTTTACGTCCTGGTTTCGGCTACCTTATCGATGATTGGCGTGTTGAGCAA ATTTGGGGGTTATATGAGCAGGGGTTACAGCATCATCAGGAAACCCAAGTGTGGATCGATTGGTGGACATTCTGGCGACG CGCGTCAGGCGGACTCAGTGCGCTGCAGCAGGCGCGAGTGTTTGAGGATATCGAAAAATTCATCAACCCGGCCGCATTAA CTAATCGAAAATTAAAGGAGGAAGCGAAACAAAAATCCTATCAAGATATGGTGAAATTGGTTGCAACCTTAGAACTTTTG CCTATTGAACATAAAACCAAGATTAGCGAATGGTTATTAAAACGTTTACAGAAATCATCGGAAACCAGTAGTAGCTGGTG GGCTCTTGGCCGGCTCGCATCACGGATCCCTTTCCATGGCAGTGCACATAATGTTATTGATAAAAAAGAGATACAAAGCT GGCTGCCCCAATTACTGTCGATTGACTGGAAAAAAAATCCACAGGCCGCTTTTGCGGTTGTCTTAATGTCTCGTATGAGT GGCGATCGCAGTCGTGATCTTGACGCCGATTGGCGAGCTAAAATTATCCAGCAGTTAACACTGGTTAAAGCGGCTGAGAG TTGGATTGAGATGGTTGACAGCATTAAAGAGCTAAATGAAGCAGAAACCAAACGCGTATTTGGTGAGGGTTTACCCATCG GATTGAAATTGATTCAGTGA
Upstream 100 bases:
>100_bases CCGAAGTCGGGACACTTCAACTTGAAGCTATCGCGGTTAACAGTCGCGAGACTAACGGCTCCCCAGAGCGCTGGCATATT GAACTGGATGTACGAGATTA
Downstream 100 bases:
>100_bases TCACCTGAAAGGGCTTAACCATTGTGCTGATTGGTAATAAGCCTTTATCAATAATCAACTTGGGTCTTGTTTTTTGTATT AAAATACAAAACTCAAGACT
Product: chaperone DnaK-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 939; Mature: 939
Protein sequence:
>939_residues MNNLVVKYLIGIDLGTTNTVVAYTDMLKPLTSDNCHIFEIEQLVAPGEVAKRPLLPSFRYHPAGGEINPIDLQLPWSDVA VDKLEGELPLVVIGEWARELGAKVDGRQVVSAKSWLSHPHVDRNADILPWAGAEGVAKVSPVLASASYLLHVRHAWNFAH PDALMEDQEVVITIPASFDEGARALTVEAASRAGLVNILLLEEPQAVCYDWYARQGARVQRELAKIKLLMVCDVGGGTTD LSLIKVAQGKDNSLALTRIGVGNHLMLGGDNVDLALAHIAEGLINGGTSANKKLSAANLSQLIQQTRKAKELLMGDDAPG SARVTVLGSGAKLIGGAKSCELTKQAVRDIALDGFFPNISFDQRPLKRRSAVVEFGLPYAADPAVSKHVAEFIADHQIAC KDALGIDSTQSGHAIPDAVLFNGGVFNSAVLSERTIELLSEWRGSAVNRLENHHPNLAVAQGAVAYARARRGAQLKIGGG SARTVFLVLEQQDAGKQAICLMPKGTEEEQELTLSERKFSLQLGLPVQFHLFSTTADQGYKIGEIITLDEQTLASGRFIS LPPLVVVLEKTTLDSVIVSLATRFTEVGTLKIDCVAENQQRWHLEFQIRQPLSQRTATDKTDALPDCFDQVREKVDLVFG ESKKQITPKAVKSLRADIEKLLGKREHWELPLLRALFDQLLEGKNHRRRSAAHERIWFNLAGYCLRPGFGYLIDDWRVEQ IWGLYEQGLQHHQETQVWIDWWTFWRRASGGLSALQQARVFEDIEKFINPAALTNRKLKEEAKQKSYQDMVKLVATLELL PIEHKTKISEWLLKRLQKSSETSSSWWALGRLASRIPFHGSAHNVIDKKEIQSWLPQLLSIDWKKNPQAAFAVVLMSRMS GDRSRDLDADWRAKIIQQLTLVKAAESWIEMVDSIKELNEAETKRVFGEGLPIGLKLIQ
Sequences:
>Translated_939_residues MNNLVVKYLIGIDLGTTNTVVAYTDMLKPLTSDNCHIFEIEQLVAPGEVAKRPLLPSFRYHPAGGEINPIDLQLPWSDVA VDKLEGELPLVVIGEWARELGAKVDGRQVVSAKSWLSHPHVDRNADILPWAGAEGVAKVSPVLASASYLLHVRHAWNFAH PDALMEDQEVVITIPASFDEGARALTVEAASRAGLVNILLLEEPQAVCYDWYARQGARVQRELAKIKLLMVCDVGGGTTD LSLIKVAQGKDNSLALTRIGVGNHLMLGGDNVDLALAHIAEGLINGGTSANKKLSAANLSQLIQQTRKAKELLMGDDAPG SARVTVLGSGAKLIGGAKSCELTKQAVRDIALDGFFPNISFDQRPLKRRSAVVEFGLPYAADPAVSKHVAEFIADHQIAC KDALGIDSTQSGHAIPDAVLFNGGVFNSAVLSERTIELLSEWRGSAVNRLENHHPNLAVAQGAVAYARARRGAQLKIGGG SARTVFLVLEQQDAGKQAICLMPKGTEEEQELTLSERKFSLQLGLPVQFHLFSTTADQGYKIGEIITLDEQTLASGRFIS LPPLVVVLEKTTLDSVIVSLATRFTEVGTLKIDCVAENQQRWHLEFQIRQPLSQRTATDKTDALPDCFDQVREKVDLVFG ESKKQITPKAVKSLRADIEKLLGKREHWELPLLRALFDQLLEGKNHRRRSAAHERIWFNLAGYCLRPGFGYLIDDWRVEQ IWGLYEQGLQHHQETQVWIDWWTFWRRASGGLSALQQARVFEDIEKFINPAALTNRKLKEEAKQKSYQDMVKLVATLELL PIEHKTKISEWLLKRLQKSSETSSSWWALGRLASRIPFHGSAHNVIDKKEIQSWLPQLLSIDWKKNPQAAFAVVLMSRMS GDRSRDLDADWRAKIIQQLTLVKAAESWIEMVDSIKELNEAETKRVFGEGLPIGLKLIQ >Mature_939_residues MNNLVVKYLIGIDLGTTNTVVAYTDMLKPLTSDNCHIFEIEQLVAPGEVAKRPLLPSFRYHPAGGEINPIDLQLPWSDVA VDKLEGELPLVVIGEWARELGAKVDGRQVVSAKSWLSHPHVDRNADILPWAGAEGVAKVSPVLASASYLLHVRHAWNFAH PDALMEDQEVVITIPASFDEGARALTVEAASRAGLVNILLLEEPQAVCYDWYARQGARVQRELAKIKLLMVCDVGGGTTD LSLIKVAQGKDNSLALTRIGVGNHLMLGGDNVDLALAHIAEGLINGGTSANKKLSAANLSQLIQQTRKAKELLMGDDAPG SARVTVLGSGAKLIGGAKSCELTKQAVRDIALDGFFPNISFDQRPLKRRSAVVEFGLPYAADPAVSKHVAEFIADHQIAC KDALGIDSTQSGHAIPDAVLFNGGVFNSAVLSERTIELLSEWRGSAVNRLENHHPNLAVAQGAVAYARARRGAQLKIGGG SARTVFLVLEQQDAGKQAICLMPKGTEEEQELTLSERKFSLQLGLPVQFHLFSTTADQGYKIGEIITLDEQTLASGRFIS LPPLVVVLEKTTLDSVIVSLATRFTEVGTLKIDCVAENQQRWHLEFQIRQPLSQRTATDKTDALPDCFDQVREKVDLVFG ESKKQITPKAVKSLRADIEKLLGKREHWELPLLRALFDQLLEGKNHRRRSAAHERIWFNLAGYCLRPGFGYLIDDWRVEQ IWGLYEQGLQHHQETQVWIDWWTFWRRASGGLSALQQARVFEDIEKFINPAALTNRKLKEEAKQKSYQDMVKLVATLELL PIEHKTKISEWLLKRLQKSSETSSSWWALGRLASRIPFHGSAHNVIDKKEIQSWLPQLLSIDWKKNPQAAFAVVLMSRMS GDRSRDLDADWRAKIIQQLTLVKAAESWIEMVDSIKELNEAETKRVFGEGLPIGLKLIQ
Specific function: Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by hscB [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 - InterPro: IPR010236 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 104077; Mature: 104077
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLVVKYLIGIDLGTTNTVVAYTDMLKPLTSDNCHIFEIEQLVAPGEVAKRPLLPSFRY CCCEEEEEEEEEECCCCCEEEEEHHHHCCCCCCCEEEEEHHHHHCCCHHHCCCCCCCCCC HPAGGEINPIDLQLPWSDVAVDKLEGELPLVVIGEWARELGAKVDGRQVVSAKSWLSHPH CCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHCCCC VDRNADILPWAGAEGVAKVSPVLASASYLLHVRHAWNFAHPDALMEDQEVVITIPASFDE CCCCCCEECCCCCCCCHHHHHHHHHHHHHEEEHHHCCCCCCCHHCCCCEEEEEEECCCCC GARALTVEAASRAGLVNILLLEEPQAVCYDWYARQGARVQRELAKIKLLMVCDVGGGTTD CCCEEEEEHHCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCCC LSLIKVAQGKDNSLALTRIGVGNHLMLGGDNVDLALAHIAEGLINGGTSANKKLSAANLS EEEEEEECCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH QLIQQTRKAKELLMGDDAPGSARVTVLGSGAKLIGGAKSCELTKQAVRDIALDGFFPNIS HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCC FDQRPLKRRSAVVEFGLPYAADPAVSKHVAEFIADHQIACKDALGIDSTQSGHAIPDAVL CCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEE FNGGVFNSAVLSERTIELLSEWRGSAVNRLENHHPNLAVAQGAVAYARARRGAQLKIGGG ECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEECCC SARTVFLVLEQQDAGKQAICLMPKGTEEEQELTLSERKFSLQLGLPVQFHLFSTTADQGY CCEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHCEEEEEECCCEEEEEEECCCCCCC KIGEIITLDEQTLASGRFISLPPLVVVLEKTTLDSVIVSLATRFTEVGTLKIDCVAENQQ EECEEEEECHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEEEECCCC RWHLEFQIRQPLSQRTATDKTDALPDCFDQVREKVDLVFGESKKQITPKAVKSLRADIEK EEEEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LLGKREHWELPLLRALFDQLLEGKNHRRRSAAHERIWFNLAGYCLRPGFGYLIDDWRVEQ HHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHH IWGLYEQGLQHHQETQVWIDWWTFWRRASGGLSALQQARVFEDIEKFINPAALTNRKLKE HHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EAKQKSYQDMVKLVATLELLPIEHKTKISEWLLKRLQKSSETSSSWWALGRLASRIPFHG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SAHNVIDKKEIQSWLPQLLSIDWKKNPQAAFAVVLMSRMSGDRSRDLDADWRAKIIQQLT CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LVKAAESWIEMVDSIKELNEAETKRVFGEGLPIGLKLIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure MNNLVVKYLIGIDLGTTNTVVAYTDMLKPLTSDNCHIFEIEQLVAPGEVAKRPLLPSFRY CCCEEEEEEEEEECCCCCEEEEEHHHHCCCCCCCEEEEEHHHHHCCCHHHCCCCCCCCCC HPAGGEINPIDLQLPWSDVAVDKLEGELPLVVIGEWARELGAKVDGRQVVSAKSWLSHPH CCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHCCCC VDRNADILPWAGAEGVAKVSPVLASASYLLHVRHAWNFAHPDALMEDQEVVITIPASFDE CCCCCCEECCCCCCCCHHHHHHHHHHHHHEEEHHHCCCCCCCHHCCCCEEEEEEECCCCC GARALTVEAASRAGLVNILLLEEPQAVCYDWYARQGARVQRELAKIKLLMVCDVGGGTTD CCCEEEEEHHCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCCC LSLIKVAQGKDNSLALTRIGVGNHLMLGGDNVDLALAHIAEGLINGGTSANKKLSAANLS EEEEEEECCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH QLIQQTRKAKELLMGDDAPGSARVTVLGSGAKLIGGAKSCELTKQAVRDIALDGFFPNIS HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCC FDQRPLKRRSAVVEFGLPYAADPAVSKHVAEFIADHQIACKDALGIDSTQSGHAIPDAVL CCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEE FNGGVFNSAVLSERTIELLSEWRGSAVNRLENHHPNLAVAQGAVAYARARRGAQLKIGGG ECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEECCC SARTVFLVLEQQDAGKQAICLMPKGTEEEQELTLSERKFSLQLGLPVQFHLFSTTADQGY CCEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHCEEEEEECCCEEEEEEECCCCCCC KIGEIITLDEQTLASGRFISLPPLVVVLEKTTLDSVIVSLATRFTEVGTLKIDCVAENQQ EECEEEEECHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEEEECCCC RWHLEFQIRQPLSQRTATDKTDALPDCFDQVREKVDLVFGESKKQITPKAVKSLRADIEK EEEEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LLGKREHWELPLLRALFDQLLEGKNHRRRSAAHERIWFNLAGYCLRPGFGYLIDDWRVEQ HHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHH IWGLYEQGLQHHQETQVWIDWWTFWRRASGGLSALQQARVFEDIEKFINPAALTNRKLKE HHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EAKQKSYQDMVKLVATLELLPIEHKTKISEWLLKRLQKSSETSSSWWALGRLASRIPFHG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SAHNVIDKKEIQSWLPQLLSIDWKKNPQAAFAVVLMSRMSGDRSRDLDADWRAKIIQQLT CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LVKAAESWIEMVDSIKELNEAETKRVFGEGLPIGLKLIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA