| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is hscA [H]
Identifier: 119944981
GI number: 119944981
Start: 1533965
End: 1535896
Strand: Direct
Name: hscA [H]
Synonym: Ping_1232
Alternate gene names: 119944981
Gene position: 1533965-1535896 (Clockwise)
Preceding gene: 119944980
Following gene: 119944982
Centisome position: 33.64
GC content: 46.33
Gene sequence:
>1932_bases ATGAACGAAACTATGCCAAACAACACACAATCTCGTTATTCCATTGGAATCGACTTAGGCACAACACACTGCGTATTATC TTATATGGATCTCTCGAAGATAGCGGAAGATCCTGCATTAGTGCCGGAATTGATTATTATGCCTATTCCACAATTAACGC AGGCAGGTATTATTGAAGAAAAAAAACAATTACCCTCTTTTATCTACATGGCCCATGAATCAGAGTTAAATGATGCTGAT ATTGCCTTGCCTTGGAACGCTCAGCCGAATGCTATTGTTGGTAGTATTGCGCGTGAACTGGGCAGTAAAACAGCTATTCG TTTAGTGTCAAGTGCAAAAAGCTGGTTGTGCCACAGTGGTGTTGATCGCCATGCGGCATTTTTACCTGCTGCCAGCCCCG AAGAGGTCCGCAAAATATCACCCTTAGATGCCACCTTTGAATATTTAAATCATATGCGTGCTGCTTGGGATGATAAATTT CCCGATTTTCCATTAGCGAAACAAGATGTGACTATCACTATTCCGGCTTCATTTGATCCCGCGGCAAGAGAGCTGACCGC AGAAGCTGCCAAGCGAGTTGGTTTTGATAACCTGACCTTGTTAGAAGAGCCGCAGGCGGCTGTTTACAACTGGATCCACG CCTGTGGAGAAGCTTGGCGTGAGCAGGTTCAGGTGGGTGATATTATTTTAGTGGTTGACGTTGGTGGTGGTACAACTGAT CTATCATTAATTGCGGTAACCGAAGAAGAGGGTAACTTAACACTGAATCGTATTGCTGTCGGGGAACATATATTACTCGG TGGCGATAATATGGATTTAGCCCTGGCTTACCGGGTTAAAGCTAAATTAAGCGCAGAGGGAAAAGAGTTACAGGCATGGC AAATTCAAGCGATTAGTCAAGCCTGTCGGGATGCAAAAGAGCAACTTTTACTGGATAACGATATCAGCAGTGTGCCTATT ACGGTACCGAGTCGTGGCTCAAAACTACTGGGTAAAACCCTGCGCACGGAGTTAACCCGCAATGAAGTTCGTGAGACATT ACTGGAAGGTTTCTTCCCCGTTGTTAATATCAATGATCATCCCAAAGCAGCTCGCCGCAGTGGTTTAACACAAAAAGGCT TGCCTTATGCGCAAGACCCGGCTGTTTCGCGTCATCTGGCGGCTTTTTTAAGCAAGCAGGTGAGTGCCGCTGATGATGTT TTAGGCAGTACAAGTTTGCAAAGTAATAATGAGGATTTTGCAGATCCATTAGCAGGTAATTTTGATAAGGCTGATAGCGT CGATTTTATTAAACCCTCGGCTATTTTATTTAATGGTGGTGTACTGAAATCGCCTCTGTTAGCAGAGCGGACTATGGCGA CTATCAATCAGTGGCTGGAGGATGCGGGTGCTGAAAAAGCGCGATTATTAGCTGACTCTGACCTGGATCTTGCTGTTGCC AGTGGTGCAAGTTATTACGGTTATGTTAAACGCGGGCAGGGTGTACGAATTCGCGGAGGCTTAGCTAATACTTATTATGT CGGCATTGAAAGCTCGATGCCCGCTATTCCAGGTATGGAGCCTCCATTAGAAGCCTTGTGTATTGCACCTTTTGGGATGG AAGAAGGCACTGAAACAGTGCCAAGTGAAGCTGAATTTGGGTTGGTTGTCGGCGAACCCGTGCGCTTCCGTTTTTTTGGA TCAAACATCCGTCGTCATGATCAAGCAGGTCTGCAGCTCGAGCATTGGATCGATGATGAGTTACAAGAGCTGCCCGAATT ACAAGCAACCTTATCGGTGGAAGGGCGCCGAGTGGGTGATGTTGTTCCGGTTCGTTTGCAGGCGAAAGTCACCGAAGTCG GGACACTTCAACTTGAAGCTATCGCGGTTAACAGTCGCGAGACTAACGGCTCCCCAGAGCGCTGGCATATTGAACTGGAT GTACGAGATTAA
Upstream 100 bases:
>100_bases GCACGTTGATCCATAAAGGTTGGAAAGTGAGTGAGGTTAAGTTACCTAAATTAGCGGCGGGACACGATGCTTCAATCATT GCACCTGCGGAGGTGGAATT
Downstream 100 bases:
>100_bases TGAATAATCTTGTTGTTAAATATCTGATTGGTATCGATTTAGGCACCACCAATACCGTGGTTGCCTATACTGATATGCTT AAGCCGTTAACCTCAGATAA
Product: chaperone DnaK-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MNETMPNNTQSRYSIGIDLGTTHCVLSYMDLSKIAEDPALVPELIIMPIPQLTQAGIIEEKKQLPSFIYMAHESELNDAD IALPWNAQPNAIVGSIARELGSKTAIRLVSSAKSWLCHSGVDRHAAFLPAASPEEVRKISPLDATFEYLNHMRAAWDDKF PDFPLAKQDVTITIPASFDPAARELTAEAAKRVGFDNLTLLEEPQAAVYNWIHACGEAWREQVQVGDIILVVDVGGGTTD LSLIAVTEEEGNLTLNRIAVGEHILLGGDNMDLALAYRVKAKLSAEGKELQAWQIQAISQACRDAKEQLLLDNDISSVPI TVPSRGSKLLGKTLRTELTRNEVRETLLEGFFPVVNINDHPKAARRSGLTQKGLPYAQDPAVSRHLAAFLSKQVSAADDV LGSTSLQSNNEDFADPLAGNFDKADSVDFIKPSAILFNGGVLKSPLLAERTMATINQWLEDAGAEKARLLADSDLDLAVA SGASYYGYVKRGQGVRIRGGLANTYYVGIESSMPAIPGMEPPLEALCIAPFGMEEGTETVPSEAEFGLVVGEPVRFRFFG SNIRRHDQAGLQLEHWIDDELQELPELQATLSVEGRRVGDVVPVRLQAKVTEVGTLQLEAIAVNSRETNGSPERWHIELD VRD
Sequences:
>Translated_643_residues MNETMPNNTQSRYSIGIDLGTTHCVLSYMDLSKIAEDPALVPELIIMPIPQLTQAGIIEEKKQLPSFIYMAHESELNDAD IALPWNAQPNAIVGSIARELGSKTAIRLVSSAKSWLCHSGVDRHAAFLPAASPEEVRKISPLDATFEYLNHMRAAWDDKF PDFPLAKQDVTITIPASFDPAARELTAEAAKRVGFDNLTLLEEPQAAVYNWIHACGEAWREQVQVGDIILVVDVGGGTTD LSLIAVTEEEGNLTLNRIAVGEHILLGGDNMDLALAYRVKAKLSAEGKELQAWQIQAISQACRDAKEQLLLDNDISSVPI TVPSRGSKLLGKTLRTELTRNEVRETLLEGFFPVVNINDHPKAARRSGLTQKGLPYAQDPAVSRHLAAFLSKQVSAADDV LGSTSLQSNNEDFADPLAGNFDKADSVDFIKPSAILFNGGVLKSPLLAERTMATINQWLEDAGAEKARLLADSDLDLAVA SGASYYGYVKRGQGVRIRGGLANTYYVGIESSMPAIPGMEPPLEALCIAPFGMEEGTETVPSEAEFGLVVGEPVRFRFFG SNIRRHDQAGLQLEHWIDDELQELPELQATLSVEGRRVGDVVPVRLQAKVTEVGTLQLEAIAVNSRETNGSPERWHIELD VRD >Mature_643_residues MNETMPNNTQSRYSIGIDLGTTHCVLSYMDLSKIAEDPALVPELIIMPIPQLTQAGIIEEKKQLPSFIYMAHESELNDAD IALPWNAQPNAIVGSIARELGSKTAIRLVSSAKSWLCHSGVDRHAAFLPAASPEEVRKISPLDATFEYLNHMRAAWDDKF PDFPLAKQDVTITIPASFDPAARELTAEAAKRVGFDNLTLLEEPQAAVYNWIHACGEAWREQVQVGDIILVVDVGGGTTD LSLIAVTEEEGNLTLNRIAVGEHILLGGDNMDLALAYRVKAKLSAEGKELQAWQIQAISQACRDAKEQLLLDNDISSVPI TVPSRGSKLLGKTLRTELTRNEVRETLLEGFFPVVNINDHPKAARRSGLTQKGLPYAQDPAVSRHLAAFLSKQVSAADDV LGSTSLQSNNEDFADPLAGNFDKADSVDFIKPSAILFNGGVLKSPLLAERTMATINQWLEDAGAEKARLLADSDLDLAVA SGASYYGYVKRGQGVRIRGGLANTYYVGIESSMPAIPGMEPPLEALCIAPFGMEEGTETVPSEAEFGLVVGEPVRFRFFG SNIRRHDQAGLQLEHWIDDELQELPELQATLSVEGRRVGDVVPVRLQAKVTEVGTLQLEAIAVNSRETNGSPERWHIELD VRD
Specific function: Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by hscB [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Escherichia coli, GI1786196, Length=336, Percent_Identity=25.297619047619, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI87082035, Length=305, Percent_Identity=23.9344262295082, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 - InterPro: IPR010236 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 70129; Mature: 70129
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00297 HSP70_1 ; PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETMPNNTQSRYSIGIDLGTTHCVLSYMDLSKIAEDPALVPELIIMPIPQLTQAGIIEE CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHCCHHHH KKQLPSFIYMAHESELNDADIALPWNAQPNAIVGSIARELGSKTAIRLVSSAKSWLCHSG HHHCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC VDRHAAFLPAASPEEVRKISPLDATFEYLNHMRAAWDDKFPDFPLAKQDVTITIPASFDP CCHHHEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCH AARELTAEAAKRVGFDNLTLLEEPQAAVYNWIHACGEAWREQVQVGDIILVVDVGGGTTD HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC LSLIAVTEEEGNLTLNRIAVGEHILLGGDNMDLALAYRVKAKLSAEGKELQAWQIQAISQ EEEEEEEECCCCEEEEEEEECCEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHH ACRDAKEQLLLDNDISSVPITVPSRGSKLLGKTLRTELTRNEVRETLLEGFFPVVNINDH HHHHHHHHEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC PKAARRSGLTQKGLPYAQDPAVSRHLAAFLSKQVSAADDVLGSTSLQSNNEDFADPLAGN CCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCC FDKADSVDFIKPSAILFNGGVLKSPLLAERTMATINQWLEDAGAEKARLLADSDLDLAVA CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEE SGASYYGYVKRGQGVRIRGGLANTYYVGIESSMPAIPGMEPPLEALCIAPFGMEEGTETV CCCCEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCCHHHEEECCCCCCCCCCCC PSEAEFGLVVGEPVRFRFFGSNIRRHDQAGLQLEHWIDDELQELPELQATLSVEGRRVGD CCCCCCEEEECCCEEEEEECCCCCHHHHCCCCHHHHCCHHHHHHHHHHEEEEECCCCCCC VVPVRLQAKVTEVGTLQLEAIAVNSRETNGSPERWHIELDVRD EEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCEEEEEEEECC >Mature Secondary Structure MNETMPNNTQSRYSIGIDLGTTHCVLSYMDLSKIAEDPALVPELIIMPIPQLTQAGIIEE CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHCCHHHH KKQLPSFIYMAHESELNDADIALPWNAQPNAIVGSIARELGSKTAIRLVSSAKSWLCHSG HHHCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC VDRHAAFLPAASPEEVRKISPLDATFEYLNHMRAAWDDKFPDFPLAKQDVTITIPASFDP CCHHHEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCH AARELTAEAAKRVGFDNLTLLEEPQAAVYNWIHACGEAWREQVQVGDIILVVDVGGGTTD HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC LSLIAVTEEEGNLTLNRIAVGEHILLGGDNMDLALAYRVKAKLSAEGKELQAWQIQAISQ EEEEEEEECCCCEEEEEEEECCEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHH ACRDAKEQLLLDNDISSVPITVPSRGSKLLGKTLRTELTRNEVRETLLEGFFPVVNINDH HHHHHHHHEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC PKAARRSGLTQKGLPYAQDPAVSRHLAAFLSKQVSAADDVLGSTSLQSNNEDFADPLAGN CCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCC FDKADSVDFIKPSAILFNGGVLKSPLLAERTMATINQWLEDAGAEKARLLADSDLDLAVA CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEE SGASYYGYVKRGQGVRIRGGLANTYYVGIESSMPAIPGMEPPLEALCIAPFGMEEGTETV CCCCEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCCHHHEEECCCCCCCCCCCC PSEAEFGLVVGEPVRFRFFGSNIRRHDQAGLQLEHWIDDELQELPELQATLSVEGRRVGD CCCCCCEEEECCCEEEEEECCCCCHHHHCCCCHHHHCCHHHHHHHHHHEEEEECCCCCCC VVPVRLQAKVTEVGTLQLEAIAVNSRETNGSPERWHIELDVRD EEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA