| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yjgA [C]
Identifier: 119944887
GI number: 119944887
Start: 1418820
End: 1419326
Strand: Reverse
Name: yjgA [C]
Synonym: Ping_1131
Alternate gene names: 119944887
Gene position: 1419326-1418820 (Counterclockwise)
Preceding gene: 119944889
Following gene: 119944870
Centisome position: 31.13
GC content: 37.08
Gene sequence:
>507_bases ATGAATAAAAAAGTTGTAGAAGTTGTTGAGGATGAAATCAGTAAATCGCAAATTAAACGTGATGCTGAAGCCCTGAAATT GGTTGGTCGTGAACTAGTTGCATTAAATAAAAAACAACTTGCTCAGATACCCGCAAGTGAATCACTTTTTCATGCTATTT CTGTTGCCCATAAAATTAGCGGCAAGCACGAAGCACTGCGCCGTCAAATACAATATATAGGTAAAGTACTCAGAACCGAA GACATTGACGTGATTCAAACTGCCCTTGATAAATTGAACAATAAACATCAGCAGTTAACCCATGCGACACAAAACTTAGA ATTGTTGAGGGATCAGTTAATCGAGCTTGGGGATAATAAAGTAGAGCAGTTATTAGTAGAATATCCGCAGCTTGATCGTC AAAAATTGCGTCAACTTGTGCGTCAGGCAAATAAGGAAAAAAAATTAGAAAAACCCGCCAAGGCTGCCAAGGATTTATTT ACTTACCTAAAACCTATTTGTTTATAA
Upstream 100 bases:
>100_bases CGTTCGCGTATAATAGAATAACATGCTTTAAAGCAAGCTTCTTGTGATGATGTTATCATGTAAGTAATTATTCCATTTAA CTGTGATAGAAAATAAATTT
Downstream 100 bases:
>100_bases CTTTCGGCCCATCAAAAAAAAGAGAAATGCTCAACTCATTTCTCTTTTTAGATTTACAACTCTTCCGCCATGCGAGTACT GCTTCAATATCGTGTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNKKVVEVVEDEISKSQIKRDAEALKLVGRELVALNKKQLAQIPASESLFHAISVAHKISGKHEALRRQIQYIGKVLRTE DIDVIQTALDKLNNKHQQLTHATQNLELLRDQLIELGDNKVEQLLVEYPQLDRQKLRQLVRQANKEKKLEKPAKAAKDLF TYLKPICL
Sequences:
>Translated_168_residues MNKKVVEVVEDEISKSQIKRDAEALKLVGRELVALNKKQLAQIPASESLFHAISVAHKISGKHEALRRQIQYIGKVLRTE DIDVIQTALDKLNNKHQQLTHATQNLELLRDQLIELGDNKVEQLLVEYPQLDRQKLRQLVRQANKEKKLEKPAKAAKDLF TYLKPICL >Mature_168_residues MNKKVVEVVEDEISKSQIKRDAEALKLVGRELVALNKKQLAQIPASESLFHAISVAHKISGKHEALRRQIQYIGKVLRTE DIDVIQTALDKLNNKHQQLTHATQNLELLRDQLIELGDNKVEQLLVEYPQLDRQKLRQLVRQANKEKKLEKPAKAAKDLF TYLKPICL
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=155, Percent_Identity=47.741935483871, Blast_Score=133, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 19287; Mature: 19287
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKVVEVVEDEISKSQIKRDAEALKLVGRELVALNKKQLAQIPASESLFHAISVAHKIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GKHEALRRQIQYIGKVLRTEDIDVIQTALDKLNNKHQQLTHATQNLELLRDQLIELGDNK CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VEQLLVEYPQLDRQKLRQLVRQANKEKKLEKPAKAAKDLFTYLKPICL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKKVVEVVEDEISKSQIKRDAEALKLVGRELVALNKKQLAQIPASESLFHAISVAHKIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GKHEALRRQIQYIGKVLRTEDIDVIQTALDKLNNKHQQLTHATQNLELLRDQLIELGDNK CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VEQLLVEYPQLDRQKLRQLVRQANKEKKLEKPAKAAKDLFTYLKPICL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA