| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is ubiG [H]
Identifier: 119944870
GI number: 119944870
Start: 1394396
End: 1395121
Strand: Reverse
Name: ubiG [H]
Synonym: Ping_1113
Alternate gene names: 119944870
Gene position: 1395121-1394396 (Counterclockwise)
Preceding gene: 119944887
Following gene: 119944869
Centisome position: 30.6
GC content: 39.94
Gene sequence:
>726_bases ATGTCAGTCAATAACAGTACAACTGCAAACAATGTTGATCCAAAAGAAATTGAAAAGTTCTCAGCAATGGCCGAACAATG GTGGGATTTAGAAGGTGACTTCAAACCATTACATATGCTTAATCCAACTCGGTTACGTTATATAGAGCAGGGCGCCGAGG GATTATTTGCCAAGTCAATTGCAGATATTGGCTGTGGTGGCGGTATTCTCAGCGAAAGCATGGCAAAAAAAGGAGCGAAT GTAATAGGCATCGATATGGCGCATGCTGCGTTACAAATTGCTAAGCTGCACGCATTAGAGACGCAAACAAAAGTACAGTA TCAAAAAATAACCGCAGAGGATTTTGCATCACAACATGCAGGTCAATTTGATCTAGTGACTTGCATGGAGATGTTAGAGC ATGTACCGGATCCTGCCTCTATTGTGCAAGCTTGTTGCGATTTGCTCAAACCGGGTGGTACGGTTTATTTTTCTACTATT AATAAAACCTTCAAGGCTTATTTAATGATGATTGTGGGTGCCGAGAATTTATTGAAATGGGTACCTAAAGGCACCCATGA ATATGAAAAATTTATCCGCCCTTCGCAGTTATTAACGGCTATTGATAGCACCACATTAAACTGTGAAGATTTATGCGGTG TAGAATTTAATCCGCTGCAGAGCGAGTTTGTTATTACTAAAAATGTCAATGTTAATTACATGCTAAGGTGTACAAAAGCT CTGTAA
Upstream 100 bases:
>100_bases CCTTTAAAATATTTTCGAAAATCTATGGGCGGCTTAGGTTAATTGTTTTATCTTTTTTACTCGTTATAATGTCTTATCTA CAAAAACCGGGTAAAGATTA
Downstream 100 bases:
>100_bases TTATTATCAACAGGGTCAGATCTGCAGGGACGTAGTGACAGAGAAGCATACATCCCCTGCTTCTTTGTCACTATGCTTAT TAAGCAAGCATCTTGCCGAA
Product: bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSVNNSTTANNVDPKEIEKFSAMAEQWWDLEGDFKPLHMLNPTRLRYIEQGAEGLFAKSIADIGCGGGILSESMAKKGAN VIGIDMAHAALQIAKLHALETQTKVQYQKITAEDFASQHAGQFDLVTCMEMLEHVPDPASIVQACCDLLKPGGTVYFSTI NKTFKAYLMMIVGAENLLKWVPKGTHEYEKFIRPSQLLTAIDSTTLNCEDLCGVEFNPLQSEFVITKNVNVNYMLRCTKA L
Sequences:
>Translated_241_residues MSVNNSTTANNVDPKEIEKFSAMAEQWWDLEGDFKPLHMLNPTRLRYIEQGAEGLFAKSIADIGCGGGILSESMAKKGAN VIGIDMAHAALQIAKLHALETQTKVQYQKITAEDFASQHAGQFDLVTCMEMLEHVPDPASIVQACCDLLKPGGTVYFSTI NKTFKAYLMMIVGAENLLKWVPKGTHEYEKFIRPSQLLTAIDSTTLNCEDLCGVEFNPLQSEFVITKNVNVNYMLRCTKA L >Mature_240_residues SVNNSTTANNVDPKEIEKFSAMAEQWWDLEGDFKPLHMLNPTRLRYIEQGAEGLFAKSIADIGCGGGILSESMAKKGANV IGIDMAHAALQIAKLHALETQTKVQYQKITAEDFASQHAGQFDLVTCMEMLEHVPDPASIVQACCDLLKPGGTVYFSTIN KTFKAYLMMIVGAENLLKWVPKGTHEYEKFIRPSQLLTAIDSTTLNCEDLCGVEFNPLQSEFVITKNVNVNYMLRCTKAL
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=248, Percent_Identity=34.6774193548387, Blast_Score=172, Evalue=2e-43, Organism=Escherichia coli, GI1788564, Length=236, Percent_Identity=55.0847457627119, Blast_Score=292, Evalue=2e-80, Organism=Caenorhabditis elegans, GI115533050, Length=240, Percent_Identity=30.4166666666667, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324476, Length=256, Percent_Identity=32.8125, Blast_Score=129, Evalue=3e-31, Organism=Drosophila melanogaster, GI281365311, Length=261, Percent_Identity=29.8850574712644, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI24585589, Length=255, Percent_Identity=30.1960784313725, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 26686; Mature: 26555
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNNSTTANNVDPKEIEKFSAMAEQWWDLEGDFKPLHMLNPTRLRYIEQGAEGLFAKSI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH ADIGCGGGILSESMAKKGANVIGIDMAHAALQIAKLHALETQTKVQYQKITAEDFASQHA HHCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GQFDLVTCMEMLEHVPDPASIVQACCDLLKPGGTVYFSTINKTFKAYLMMIVGAENLLKW CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH VPKGTHEYEKFIRPSQLLTAIDSTTLNCEDLCGVEFNPLQSEFVITKNVNVNYMLRCTKA CCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEECCCEEEEEEEECC L C >Mature Secondary Structure SVNNSTTANNVDPKEIEKFSAMAEQWWDLEGDFKPLHMLNPTRLRYIEQGAEGLFAKSI CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH ADIGCGGGILSESMAKKGANVIGIDMAHAALQIAKLHALETQTKVQYQKITAEDFASQHA HHCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GQFDLVTCMEMLEHVPDPASIVQACCDLLKPGGTVYFSTINKTFKAYLMMIVGAENLLKW CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH VPKGTHEYEKFIRPSQLLTAIDSTTLNCEDLCGVEFNPLQSEFVITKNVNVNYMLRCTKA CCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEECCCEEEEEEEECC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA