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The map label for this gene is asmA [H]

Identifier: 119944777

GI number: 119944777

Start: 1281556

End: 1283478

Strand: Reverse

Name: asmA [H]

Synonym: Ping_1019

Alternate gene names: 119944777

Gene position: 1283478-1281556 (Counterclockwise)

Preceding gene: 119944779

Following gene: 119944774

Centisome position: 28.15

GC content: 38.74

Gene sequence:

>1923_bases
ATGAAACTATTTCTTAAATTATTTGCGGGATTGGTGGTGCTATTGATAGTCGCCGTTGTACTGTTAATAACCACAATCGA
TCCCAATGATTATAAACAGCAAATTCAAACTCAAGTTAAAAAGTCCATTAACAGAGACTTGGCTATTAATGGCGATATTA
GCTGGGCGTTTTATCCGCAGTTAGGTTTTAGCAGTGGCGAAATTGAACTGCGTAACCTTGATGGATTTAATCGTCAAAAT
TTACTTAAAATTGATCAGGCTTCCCTTGGTATAGATCTTGTACCTCTGTTAAAAGGTCAAATTAAAATTGGTGAATTAAC
TGTCAATGGTTTGGTTGTTAACCTTATTACCAATAAAAATGGCCGTTCAAATCTGGATAATATGCAGGCCAGTGGCGCGC
CCGATCCGAAAGAAAAAGCACCCGAGAAAGACATAAGCAGCGAGACTGAAAAAGGCTTTTTTGCGCTGGAAAATTTGCAG
TTAGCCGGTATTAATATCAATGATGCGCAAATAGAGATTCAGGATCTTAAAGCCGCTACCACCCATAAAGCCAATATCAA
AAAAATTCAACTCGGTAAATTTTCACCCGGACAGGAAACGGATTTATCCGTGCAGGCCGATCTGATCCTCGATAATCTGC
AGGCGCAATTAGATTTGCAATCGAAATTACTGGTCGCTTCGGACTTTTCAGCGGTTGAGCTTAAGCAATTTTCTCTTACA
ACATTATTGACCGGAGAAACCTTACCCAACGGGAAAGTAGACGGCTCGATTAATACCGATATCAAATATGATCTTAACAA
TGCAAAAGCGGAATTAACTGATTTAATTATTAAGCTTGATAAAATCCAGTTATCTGGACAGCTTTCGGTACAAACCAAGC
AGTTAACCACAGTACGTTTCGCACTGAAAGGAAATCAATGGGATTTCGCGCCCTATTTACCTGAGCCTGCAGCAGCTTCC
ACTGAAGCAGCAAGTACTGAAAAAACCAGCATCGAAACAACCAATGCTAAAAAAAGTGAACAGGAGCCGGATCTTAGCAT
ATTAAACAGTCTGGATATCAACGGCACATTGTCTATCGAGGGCGTCAAAGCATCGGGTTTAACCATTGGCAAAATTAATT
CAAAAATTATTGTCAATAAAGGCAAAGCACAACTAACGCCATTAACCGCCGAGCTTTATCAGGGTCTATTAACTATGGAG
GCATCCATTGAAGAGCGTAAAGGATTAAACAGTTACCAGATTTCAAGCAATCTAAACAACGTACAAATACGTCCTCTGCT
GATTGATGCAGCTGAAATTGATTTTATTAGCGGCACAACTGACTTTAACTTTGCAGGTAAAGGACAAGGTTTAACCGCCT
CTAAAATAAAAAAAGGGTTAACGGGAAAGGGAGATTTTAAATTATTAGATGGTGAGTTATACGGTATTAACCTTTCTCAG
GAAGTGCGTATCCTAAAAGCGAAACTGACCGCGGCCCCGCAACCCACTGAAGCTAATATTAAAAAAACCGATTTTGCATC
ATTAACTGGAAATTTCACTATCGATAATGGCATTGTCGATAACCAAAAATTATTAATGCTTTCACCTGTGATGCGTCTTG
ATGGTAGTGGACTGGCTGACATTTTAAAAGAGACATTGGACTATCGTTTAAGTGTCACTCCTTTATCAAAAAGCACCGAA
AAAACCGAACTGGGCGATCTCAGTGGTTTAGTTATTCCACTGCTTATTAAAGGGCCTTTTTCTGATCCTAAATTTACTTT
AGACACCGAAGGCGCTATCAAAGAGCGGCTTACTCTGGAGAAAAAACGTCTAGAGGAGAAACTTAAAAAAGAATCTCAAC
AAAGAATAGAAGAGCAAAAAAATAAGCTGGAAGATAAAGTAAAAGATAAATTAGGAGATAAACTCAAAAATCTGTTTGGT
TAA

Upstream 100 bases:

>100_bases
ATGTTATAAAACTGACGCTAAGAGCTTAATCTCAATTTAACTCCTTTATCAAATTGTTATAAAGGGGTTAAATTTAAATA
ACACCGATAAGGAAAATTCA

Downstream 100 bases:

>100_bases
GCATTTTAGACTTATATCTCAGCGGATATATTGATGGTGTATAAAGCACTGAACGTGGAAACGCTCGGTGCTTTCTTTTT
AGGCCACATAAAAAAGAAAG

Product: outer membrane protein assembly protein AsmA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MKLFLKLFAGLVVLLIVAVVLLITTIDPNDYKQQIQTQVKKSINRDLAINGDISWAFYPQLGFSSGEIELRNLDGFNRQN
LLKIDQASLGIDLVPLLKGQIKIGELTVNGLVVNLITNKNGRSNLDNMQASGAPDPKEKAPEKDISSETEKGFFALENLQ
LAGININDAQIEIQDLKAATTHKANIKKIQLGKFSPGQETDLSVQADLILDNLQAQLDLQSKLLVASDFSAVELKQFSLT
TLLTGETLPNGKVDGSINTDIKYDLNNAKAELTDLIIKLDKIQLSGQLSVQTKQLTTVRFALKGNQWDFAPYLPEPAAAS
TEAASTEKTSIETTNAKKSEQEPDLSILNSLDINGTLSIEGVKASGLTIGKINSKIIVNKGKAQLTPLTAELYQGLLTME
ASIEERKGLNSYQISSNLNNVQIRPLLIDAAEIDFISGTTDFNFAGKGQGLTASKIKKGLTGKGDFKLLDGELYGINLSQ
EVRILKAKLTAAPQPTEANIKKTDFASLTGNFTIDNGIVDNQKLLMLSPVMRLDGSGLADILKETLDYRLSVTPLSKSTE
KTELGDLSGLVIPLLIKGPFSDPKFTLDTEGAIKERLTLEKKRLEEKLKKESQQRIEEQKNKLEDKVKDKLGDKLKNLFG

Sequences:

>Translated_640_residues
MKLFLKLFAGLVVLLIVAVVLLITTIDPNDYKQQIQTQVKKSINRDLAINGDISWAFYPQLGFSSGEIELRNLDGFNRQN
LLKIDQASLGIDLVPLLKGQIKIGELTVNGLVVNLITNKNGRSNLDNMQASGAPDPKEKAPEKDISSETEKGFFALENLQ
LAGININDAQIEIQDLKAATTHKANIKKIQLGKFSPGQETDLSVQADLILDNLQAQLDLQSKLLVASDFSAVELKQFSLT
TLLTGETLPNGKVDGSINTDIKYDLNNAKAELTDLIIKLDKIQLSGQLSVQTKQLTTVRFALKGNQWDFAPYLPEPAAAS
TEAASTEKTSIETTNAKKSEQEPDLSILNSLDINGTLSIEGVKASGLTIGKINSKIIVNKGKAQLTPLTAELYQGLLTME
ASIEERKGLNSYQISSNLNNVQIRPLLIDAAEIDFISGTTDFNFAGKGQGLTASKIKKGLTGKGDFKLLDGELYGINLSQ
EVRILKAKLTAAPQPTEANIKKTDFASLTGNFTIDNGIVDNQKLLMLSPVMRLDGSGLADILKETLDYRLSVTPLSKSTE
KTELGDLSGLVIPLLIKGPFSDPKFTLDTEGAIKERLTLEKKRLEEKLKKESQQRIEEQKNKLEDKVKDKLGDKLKNLFG
>Mature_640_residues
MKLFLKLFAGLVVLLIVAVVLLITTIDPNDYKQQIQTQVKKSINRDLAINGDISWAFYPQLGFSSGEIELRNLDGFNRQN
LLKIDQASLGIDLVPLLKGQIKIGELTVNGLVVNLITNKNGRSNLDNMQASGAPDPKEKAPEKDISSETEKGFFALENLQ
LAGININDAQIEIQDLKAATTHKANIKKIQLGKFSPGQETDLSVQADLILDNLQAQLDLQSKLLVASDFSAVELKQFSLT
TLLTGETLPNGKVDGSINTDIKYDLNNAKAELTDLIIKLDKIQLSGQLSVQTKQLTTVRFALKGNQWDFAPYLPEPAAAS
TEAASTEKTSIETTNAKKSEQEPDLSILNSLDINGTLSIEGVKASGLTIGKINSKIIVNKGKAQLTPLTAELYQGLLTME
ASIEERKGLNSYQISSNLNNVQIRPLLIDAAEIDFISGTTDFNFAGKGQGLTASKIKKGLTGKGDFKLLDGELYGINLSQ
EVRILKAKLTAAPQPTEANIKKTDFASLTGNFTIDNGIVDNQKLLMLSPVMRLDGSGLADILKETLDYRLSVTPLSKSTE
KTELGDLSGLVIPLLIKGPFSDPKFTLDTEGAIKERLTLEKKRLEEKLKKESQQRIEEQKNKLEDKVKDKLGDKLKNLFG

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=651, Percent_Identity=20.2764976958525, Blast_Score=97, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 69916; Mature: 69916

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFLKLFAGLVVLLIVAVVLLITTIDPNDYKQQIQTQVKKSINRDLAINGDISWAFYPQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEEEECC
LGFSSGEIELRNLDGFNRQNLLKIDQASLGIDLVPLLKGQIKIGELTVNGLVVNLITNKN
CCCCCCCEEEECCCCCCCCCEEEEEHHHCCEEEEECCCCCEEEEEEEECCEEEEEEECCC
GRSNLDNMQASGAPDPKEKAPEKDISSETEKGFFALENLQLAGININDAQIEIQDLKAAT
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECEEEEEEECCCCEEEEECCCHHH
THKANIKKIQLGKFSPGQETDLSVQADLILDNLQAQLDLQSKLLVASDFSAVELKQFSLT
CCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEE
TLLTGETLPNGKVDGSINTDIKYDLNNAKAELTDLIIKLDKIQLSGQLSVQTKQLTTVRF
EEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHEEEEEEECCEEEEEEEEEEEEEE
ALKGNQWDFAPYLPEPAAASTEAASTEKTSIETTNAKKSEQEPDLSILNSLDINGTLSIE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCEEEEE
GVKASGLTIGKINSKIIVNKGKAQLTPLTAELYQGLLTMEASIEERKGLNSYQISSNLNN
EEEECCEEEEECCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
VQIRPLLIDAAEIDFISGTTDFNFAGKGQGLTASKIKKGLTGKGDFKLLDGELYGINLSQ
EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCEEEEECCHH
EVRILKAKLTAAPQPTEANIKKTDFASLTGNFTIDNGIVDNQKLLMLSPVMRLDGSGLAD
HHHEEEEHHCCCCCCCCCCCCCCCHHEECCCEEECCCEECCCEEEEECHHHHCCCCCHHH
ILKETLDYRLSVTPLSKSTEKTELGDLSGLVIPLLIKGPFSDPKFTLDTEGAIKERLTLE
HHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHH
KKRLEEKLKKESQQRIEEQKNKLEDKVKDKLGDKLKNLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLFLKLFAGLVVLLIVAVVLLITTIDPNDYKQQIQTQVKKSINRDLAINGDISWAFYPQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEEEECC
LGFSSGEIELRNLDGFNRQNLLKIDQASLGIDLVPLLKGQIKIGELTVNGLVVNLITNKN
CCCCCCCEEEECCCCCCCCCEEEEEHHHCCEEEEECCCCCEEEEEEEECCEEEEEEECCC
GRSNLDNMQASGAPDPKEKAPEKDISSETEKGFFALENLQLAGININDAQIEIQDLKAAT
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECEEEEEEECCCCEEEEECCCHHH
THKANIKKIQLGKFSPGQETDLSVQADLILDNLQAQLDLQSKLLVASDFSAVELKQFSLT
CCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEE
TLLTGETLPNGKVDGSINTDIKYDLNNAKAELTDLIIKLDKIQLSGQLSVQTKQLTTVRF
EEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHEEEEEEECCEEEEEEEEEEEEEE
ALKGNQWDFAPYLPEPAAASTEAASTEKTSIETTNAKKSEQEPDLSILNSLDINGTLSIE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCEEEEE
GVKASGLTIGKINSKIIVNKGKAQLTPLTAELYQGLLTMEASIEERKGLNSYQISSNLNN
EEEECCEEEEECCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
VQIRPLLIDAAEIDFISGTTDFNFAGKGQGLTASKIKKGLTGKGDFKLLDGELYGINLSQ
EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCEEEEECCHH
EVRILKAKLTAAPQPTEANIKKTDFASLTGNFTIDNGIVDNQKLLMLSPVMRLDGSGLAD
HHHEEEEHHCCCCCCCCCCCCCCCHHEECCCEEECCCEECCCEEEEECHHHHCCCCCHHH
ILKETLDYRLSVTPLSKSTEKTELGDLSGLVIPLLIKGPFSDPKFTLDTEGAIKERLTLE
HHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHH
KKRLEEKLKKESQQRIEEQKNKLEDKVKDKLGDKLKNLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]