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The map label for this gene is yfcN [C]

Identifier: 119944774

GI number: 119944774

Start: 1278613

End: 1279149

Strand: Reverse

Name: yfcN [C]

Synonym: Ping_1016

Alternate gene names: 119944774

Gene position: 1279149-1278613 (Counterclockwise)

Preceding gene: 119944777

Following gene: 119944772

Centisome position: 28.05

GC content: 38.73

Gene sequence:

>537_bases
ATGACTAATAATAATAAAAATGATGATTTTTCACTGTTTAGTGCAGAGTTTTCAGGTATTAAAAAATTACCACAGGATAC
CATAATACTGCCGACTAAAAATATGAAGAAAAGGCAGATCCTTAAAAAAATCCGTGAAGAATCATTTGAAACAAGCCATT
TTTCCGATGGTTTTGAACCTCTTCTGGCAGAAGAGGGGCCAGTGCGTTATAAACGCGAGAATGCTGAAAAGTATTTGTTT
AAGCAATTACGACGCGGTGATTTTGCACCTGAAATTATTTTAGATTTACACGGCTTAACCCAAGACGAAGCTAAACGTGA
ATTAGGTGCCCTGATTACTTGCTGTAAAAAAGAGGGATTATATTGCTGCAGTGTGATGCACGGTGTTGGTAAAAATATTT
TGAAAAAAAAGGTGCCATTATGGTTAGCCCAACACCCGGGTATTTTAGCTTTCCATCAGGCACCGCTTGAGTTTGGCGGA
CACGGGGCTTTACTCGTCTTAATCGAACTTGAGGACTGGCAAAAACGCGAGTATTAA

Upstream 100 bases:

>100_bases
GTTAGCAGTTCATTTATTGCTTCTTCTTTAAAAATCGTGTCCAATTTATGCTCCAATTAAGGTAAACTTGTTCGGCATAC
AAAACAGCGCAGGAAAGACC

Downstream 100 bases:

>100_bases
AAAAAATTGCCACTGTATCGTAAATAACAGTTCAGTCTCGATTAAAACTAACCCGGCATCGCCAGATTAGCTAGCTAAAT
GACATGACCAAATTACATGT

Product: Smr protein/MutS2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTNNNKNDDFSLFSAEFSGIKKLPQDTIILPTKNMKKRQILKKIREESFETSHFSDGFEPLLAEEGPVRYKRENAEKYLF
KQLRRGDFAPEIILDLHGLTQDEAKRELGALITCCKKEGLYCCSVMHGVGKNILKKKVPLWLAQHPGILAFHQAPLEFGG
HGALLVLIELEDWQKREY

Sequences:

>Translated_178_residues
MTNNNKNDDFSLFSAEFSGIKKLPQDTIILPTKNMKKRQILKKIREESFETSHFSDGFEPLLAEEGPVRYKRENAEKYLF
KQLRRGDFAPEIILDLHGLTQDEAKRELGALITCCKKEGLYCCSVMHGVGKNILKKKVPLWLAQHPGILAFHQAPLEFGG
HGALLVLIELEDWQKREY
>Mature_177_residues
TNNNKNDDFSLFSAEFSGIKKLPQDTIILPTKNMKKRQILKKIREESFETSHFSDGFEPLLAEEGPVRYKRENAEKYLFK
QLRRGDFAPEIILDLHGLTQDEAKRELGALITCCKKEGLYCCSVMHGVGKNILKKKVPLWLAQHPGILAFHQAPLEFGGH
GALLVLIELEDWQKREY

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=169, Percent_Identity=52.6627218934911, Blast_Score=187, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 20429; Mature: 20298

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS50828 SMR ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNNKNDDFSLFSAEFSGIKKLPQDTIILPTKNMKKRQILKKIREESFETSHFSDGFEP
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
LLAEEGPVRYKRENAEKYLFKQLRRGDFAPEIILDLHGLTQDEAKRELGALITCCKKEGL
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
YCCSVMHGVGKNILKKKVPLWLAQHPGILAFHQAPLEFGGHGALLVLIELEDWQKREY
HHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
TNNNKNDDFSLFSAEFSGIKKLPQDTIILPTKNMKKRQILKKIREESFETSHFSDGFEP
CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
LLAEEGPVRYKRENAEKYLFKQLRRGDFAPEIILDLHGLTQDEAKRELGALITCCKKEGL
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
YCCSVMHGVGKNILKKKVPLWLAQHPGILAFHQAPLEFGGHGALLVLIELEDWQKREY
HHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA