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The map label for this gene is glcA [H]

Identifier: 119944327

GI number: 119944327

Start: 709989

End: 711587

Strand: Reverse

Name: glcA [H]

Synonym: Ping_0554

Alternate gene names: 119944327

Gene position: 711587-709989 (Counterclockwise)

Preceding gene: 119944330

Following gene: 119944325

Centisome position: 15.61

GC content: 44.9

Gene sequence:

>1599_bases
ATGAAGACAATACTGCACTTAGCCGCCAAAATGACCGCCATCGCATTAGCCGTTTCACTCGCCGGTTGCAGCTCAACAGC
AAAAGAGGCTAATGGCGATACCACTCTGGTACAAACCAAAAAACCAGTTGTTTTGACAGATGCGCCTATTACACCAAGTG
AAAAATGGAAATTGGTCTGGAGTGATGAATTCGATGGTGACAGCATTGACAAGAGAAAATGGGATTTTGAAGAAAACTGT
TGGGGTGGCGGTAATAATGAGCAGCAATGTTATACCAAGCGGGAAAGTAATTCCTTTGTAGAAGATGGAAAACTTAACAT
TGTTGCCAAAAAAGGCAGTTTTACTGGCCCGGACAATCCAGATGGCCGTACTGAGACGACCAAAACCTTACCCTATACTT
CGGCTCGATTACGTACCTTAAACAAAAAAGACTGGAAATACGGTCGTTTTGAAGTCCGGGCGAAACTGCCTCAAGGTCAA
GGAACCTGGCCCGCAATCTGGATGCTACCAACGGATTTTGTATATAGCGGCTGGGCAGCTTCAGGTGAAATAGACATTAT
GGAAGCGGTAAATTTGAAAGTCCAATCTGATGCGCCGAATGCCGCTGCAGGTGAAGAAGAATCACGTGTTTATGGCAGTC
TGCACTATGGGAAAGAATGGCCGGATAATGCCTACACAGGTCAAGGCGCAGCATTACCAAAGGGCATCAATCCCGCCGAT
GATTTTCATACCTATGCTATTGAGTGGGAAGAAGGTGAAATTCGCTGGTATGTCGATAATATTCACTTTGCCACGCAAAG
ACAAGACGGTTGGTACAGTCAGTATGAAAAAGATGGCACGCTGATCAATGCCGAAGAAAGTGCCCCTTTCAATCAAAAAT
TTCATCTGCTGCTAAATCTTGCGGTAGGAGGTTCATGGGCCGCAAATGCCAATAATAAGGGGATTGATGAATCAGTCTTC
CCGCAGACATTAGCGGTTGATTATGTGCGTGTTTATCGCTGTAGCGTGGATCGCTGGAAGGGTAAAGGTTGCGCCAGTAC
TTCAGAAACGGACAAACTGGTTAAAGGTCATGCAGTGCCCGCCATTCTTGCAGCCGATGACAGTTATGCAGAAGGTCCTC
TGTTAGATATTTATACAGATGCATTGAATACAAGCTTAGCGTTTGACAGTTACAACCCTGTTGATGTGGTCAGTTATCAA
GAAATTGAAGAAGCCGGTCGAGGTAAAGTCCTGCAAGTCACTAAGAAAAACGGTGCGGGGAACATTTATATCCGAGCGCC
AAAAACAGATTTGACCCACTGGCTTGATGGCGGACAGTTAGTGTTTGACATCAATGTTGAAAGCCAGGAAGAAGGTGCAG
AACTTTTAGTTAAACTTGATAGTGGCTGGCCTGCAAGCAGTGATTACACGGTGACAACACCTCCAGTGGGTACGTGGGGA
GAAGTTAAAATTGATATCGCCGACATCCTAGCTGGCGGTAACCGCTTCGAAAATGGTAAAGCCAACATAGCTGCGATTAC
AAATTTATTGGTTTTTGAACCCTTGGCATCAATGACCTTTAAACTGGATAACATTCGTTTTGAATATGCACCAAAATAA

Upstream 100 bases:

>100_bases
CCATTGCGGCCATAGTAAGGCTTATATGTAAACAGGTGTTTAATAGTGATATAAGAAAGCGCTTACAATTAATTTCACAC
AAACAAGGGAAGAATAAATA

Downstream 100 bases:

>100_bases
CGGCTCCATCTGCTCTAATAACAGCTGATATCAGTCGGTAATATTACTCTCTGTTGTTATCCTGACCGAGGTCAGACAGC
CTTTAAATAAGGCTATCTGA

Product: glucan endo-1,3-beta-D-glucosidase

Products: NA

Alternate protein names: (1->3)-beta-glucan endohydrolase; (1->3)-beta-glucanase A1 [H]

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKTILHLAAKMTAIALAVSLAGCSSTAKEANGDTTLVQTKKPVVLTDAPITPSEKWKLVWSDEFDGDSIDKRKWDFEENC
WGGGNNEQQCYTKRESNSFVEDGKLNIVAKKGSFTGPDNPDGRTETTKTLPYTSARLRTLNKKDWKYGRFEVRAKLPQGQ
GTWPAIWMLPTDFVYSGWAASGEIDIMEAVNLKVQSDAPNAAAGEEESRVYGSLHYGKEWPDNAYTGQGAALPKGINPAD
DFHTYAIEWEEGEIRWYVDNIHFATQRQDGWYSQYEKDGTLINAEESAPFNQKFHLLLNLAVGGSWAANANNKGIDESVF
PQTLAVDYVRVYRCSVDRWKGKGCASTSETDKLVKGHAVPAILAADDSYAEGPLLDIYTDALNTSLAFDSYNPVDVVSYQ
EIEEAGRGKVLQVTKKNGAGNIYIRAPKTDLTHWLDGGQLVFDINVESQEEGAELLVKLDSGWPASSDYTVTTPPVGTWG
EVKIDIADILAGGNRFENGKANIAAITNLLVFEPLASMTFKLDNIRFEYAPK

Sequences:

>Translated_532_residues
MKTILHLAAKMTAIALAVSLAGCSSTAKEANGDTTLVQTKKPVVLTDAPITPSEKWKLVWSDEFDGDSIDKRKWDFEENC
WGGGNNEQQCYTKRESNSFVEDGKLNIVAKKGSFTGPDNPDGRTETTKTLPYTSARLRTLNKKDWKYGRFEVRAKLPQGQ
GTWPAIWMLPTDFVYSGWAASGEIDIMEAVNLKVQSDAPNAAAGEEESRVYGSLHYGKEWPDNAYTGQGAALPKGINPAD
DFHTYAIEWEEGEIRWYVDNIHFATQRQDGWYSQYEKDGTLINAEESAPFNQKFHLLLNLAVGGSWAANANNKGIDESVF
PQTLAVDYVRVYRCSVDRWKGKGCASTSETDKLVKGHAVPAILAADDSYAEGPLLDIYTDALNTSLAFDSYNPVDVVSYQ
EIEEAGRGKVLQVTKKNGAGNIYIRAPKTDLTHWLDGGQLVFDINVESQEEGAELLVKLDSGWPASSDYTVTTPPVGTWG
EVKIDIADILAGGNRFENGKANIAAITNLLVFEPLASMTFKLDNIRFEYAPK
>Mature_532_residues
MKTILHLAAKMTAIALAVSLAGCSSTAKEANGDTTLVQTKKPVVLTDAPITPSEKWKLVWSDEFDGDSIDKRKWDFEENC
WGGGNNEQQCYTKRESNSFVEDGKLNIVAKKGSFTGPDNPDGRTETTKTLPYTSARLRTLNKKDWKYGRFEVRAKLPQGQ
GTWPAIWMLPTDFVYSGWAASGEIDIMEAVNLKVQSDAPNAAAGEEESRVYGSLHYGKEWPDNAYTGQGAALPKGINPAD
DFHTYAIEWEEGEIRWYVDNIHFATQRQDGWYSQYEKDGTLINAEESAPFNQKFHLLLNLAVGGSWAANANNKGIDESVF
PQTLAVDYVRVYRCSVDRWKGKGCASTSETDKLVKGHAVPAILAADDSYAEGPLLDIYTDALNTSLAFDSYNPVDVVSYQ
EIEEAGRGKVLQVTKKNGAGNIYIRAPKTDLTHWLDGGQLVFDINVESQEEGAELLVKLDSGWPASSDYTVTTPPVGTWG
EVKIDIADILAGGNRFENGKANIAAITNLLVFEPLASMTFKLDNIRFEYAPK

Specific function: Lysis of cellular walls containing beta-1,3-glucans. Implicated in the defense against fungal pathogens [H]

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR008263 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: =3.2.1.39 [H]

Molecular weight: Translated: 58676; Mature: 58676

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTILHLAAKMTAIALAVSLAGCSSTAKEANGDTTLVQTKKPVVLTDAPITPSEKWKLVW
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCEEEECCCCCCCCCEEEEE
SDEFDGDSIDKRKWDFEENCWGGGNNEQQCYTKRESNSFVEDGKLNIVAKKGSFTGPDNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCC
DGRTETTKTLPYTSARLRTLNKKDWKYGRFEVRAKLPQGQGTWPAIWMLPTDFVYSGWAA
CCCCCCCEECCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEECCCCC
SGEIDIMEAVNLKVQSDAPNAAAGEEESRVYGSLHYGKEWPDNAYTGQGAALPKGINPAD
CCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DFHTYAIEWEEGEIRWYVDNIHFATQRQDGWYSQYEKDGTLINAEESAPFNQKFHLLLNL
CCEEEEEEEECCEEEEEEEEEEEEEECCCCCHHHHCCCCCEEECCCCCCCCCEEEEEEEE
AVGGSWAANANNKGIDESVFPQTLAVDYVRVYRCSVDRWKGKGCASTSETDKLVKGHAVP
EECCCEECCCCCCCCCHHHCCHHHHHHEEEEEEECCHHHCCCCCCCCCHHHHHHHCCCCC
AILAADDSYAEGPLLDIYTDALNTSLAFDSYNPVDVVSYQEIEEAGRGKVLQVTKKNGAG
EEEECCCCCCCCCEEEEEHHHCCCEEEECCCCCEEEEEHHHHHHCCCCCEEEEEECCCCC
NIYIRAPKTDLTHWLDGGQLVFDINVESQEEGAELLVKLDSGWPASSDYTVTTPPVGTWG
EEEEECCCCCHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCC
EVKIDIADILAGGNRFENGKANIAAITNLLVFEPLASMTFKLDNIRFEYAPK
EEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHEEEEECEEEEECCC
>Mature Secondary Structure
MKTILHLAAKMTAIALAVSLAGCSSTAKEANGDTTLVQTKKPVVLTDAPITPSEKWKLVW
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCEEEECCCCCCCCCEEEEE
SDEFDGDSIDKRKWDFEENCWGGGNNEQQCYTKRESNSFVEDGKLNIVAKKGSFTGPDNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCC
DGRTETTKTLPYTSARLRTLNKKDWKYGRFEVRAKLPQGQGTWPAIWMLPTDFVYSGWAA
CCCCCCCEECCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEECCCCC
SGEIDIMEAVNLKVQSDAPNAAAGEEESRVYGSLHYGKEWPDNAYTGQGAALPKGINPAD
CCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DFHTYAIEWEEGEIRWYVDNIHFATQRQDGWYSQYEKDGTLINAEESAPFNQKFHLLLNL
CCEEEEEEEECCEEEEEEEEEEEEEECCCCCHHHHCCCCCEEECCCCCCCCCEEEEEEEE
AVGGSWAANANNKGIDESVFPQTLAVDYVRVYRCSVDRWKGKGCASTSETDKLVKGHAVP
EECCCEECCCCCCCCCHHHCCHHHHHHEEEEEEECCHHHCCCCCCCCCHHHHHHHCCCCC
AILAADDSYAEGPLLDIYTDALNTSLAFDSYNPVDVVSYQEIEEAGRGKVLQVTKKNGAG
EEEECCCCCCCCCEEEEEHHHCCCEEEECCCCCEEEEEHHHHHHCCCCCEEEEEECCCCC
NIYIRAPKTDLTHWLDGGQLVFDINVESQEEGAELLVKLDSGWPASSDYTVTTPPVGTWG
EEEEECCCCCHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCC
EVKIDIADILAGGNRFENGKANIAAITNLLVFEPLASMTFKLDNIRFEYAPK
EEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHEEEEECEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2311931 [H]