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The map label for this gene is dppB [H]

Identifier: 119944319

GI number: 119944319

Start: 697897

End: 698871

Strand: Direct

Name: dppB [H]

Synonym: Ping_0546

Alternate gene names: 119944319

Gene position: 697897-698871 (Clockwise)

Preceding gene: 119944318

Following gene: 119944320

Centisome position: 15.31

GC content: 43.49

Gene sequence:

>975_bases
ATGAGTTTTTTATTACGTCGACTTGGTTTTTATTTTACTGCTTTCTTGATAGCGATCTCCTTTAACTTCGCCCTGCCAAG
GATGATGCCAGGTGATCCTATTGATGCCTTATTTGCAGCAGCGCAAGGTCGAATGGATCCTGCTCAGATGGATGCAGTAA
GAGCAATGTACGGTTTTATGGACGGAACATTATTCGAACAATATATCTCCTACATTAAAAGTGTGTTTACTCTGGATCTG
GGTCCATCGGTATTAATGTTCCCGATTGACGTTATTGATGTTGTTGGAATGGCACTGCCGTGGACAATGTTTTTAGCACT
GGGATCATTGATTGTTGCTTTAATTCTAGGGGTCACTATCGGAACATATTCATCATATCATCGTGATGGATTGTTTGGGC
AAATTGTGCCGCCCGTTCTCGCCTTTGTCAGTAACTTTCCATACGTGGTAACCGCGCTACTACTATTCTTCTTTTTCGGT
TTGCAGCTTGAACTCTTACCCCTTGCTTATACCTATGACCCTTCTATAGAAAAAGCATTTACGCTGGAATTTATTAGCAG
CGTTGCCGAGCATGCCATTTTACCGATGGGCTCAATGATTTTAGTCGGTATCGCGACTTGGGTATTTAATATGCGTAATG
CGATGATCAATGTACTGGGTGAAGATTACGTCACCATGGCTGAAGCTAAAGGTTTAAGTGGTCCGCGTGTGATGTATCGT
TATGCCGGTCGAAATGCAATTTTGCCGGTTGCGACGGCGATTGCGATGGCAATTGGTTTTTCTTTTGCCGGTTCGATTAT
GACTGAGGTGGTCTTTAACTATCAGGGGTTGGGCAATATTCTCCTGAAGGGCATTGTTGCACGGGATTATCCGCTGATTC
AGGCCATTTTACTTATTCTTGTCTCTGCCGTCCTTACCGCAAATTTCATAGCCGATCTGCTTTATGTCTGGCTTGACCCT
CGGATTTCTAACTAA

Upstream 100 bases:

>100_bases
ACGGTGGTAAACGTAACTTAATTATCAATAATCTTCACCTTAAGTAATTTTTGTTTATAAAAAGAGCCACATTGTGGCTC
TTTAATTGTTGGAAAAGATT

Downstream 100 bases:

>100_bases
GGTTTACAACATGAACATCAACAAGACAATCAATACAGATGCGCCTGTTTCTGCTGCTCATACCAGTGAGTTTAGAAAAA
AATTTAAATCTATCATAAAA

Product: peptide ABC transporter, protein inner membrane binding component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSFLLRRLGFYFTAFLIAISFNFALPRMMPGDPIDALFAAAQGRMDPAQMDAVRAMYGFMDGTLFEQYISYIKSVFTLDL
GPSVLMFPIDVIDVVGMALPWTMFLALGSLIVALILGVTIGTYSSYHRDGLFGQIVPPVLAFVSNFPYVVTALLLFFFFG
LQLELLPLAYTYDPSIEKAFTLEFISSVAEHAILPMGSMILVGIATWVFNMRNAMINVLGEDYVTMAEAKGLSGPRVMYR
YAGRNAILPVATAIAMAIGFSFAGSIMTEVVFNYQGLGNILLKGIVARDYPLIQAILLILVSAVLTANFIADLLYVWLDP
RISN

Sequences:

>Translated_324_residues
MSFLLRRLGFYFTAFLIAISFNFALPRMMPGDPIDALFAAAQGRMDPAQMDAVRAMYGFMDGTLFEQYISYIKSVFTLDL
GPSVLMFPIDVIDVVGMALPWTMFLALGSLIVALILGVTIGTYSSYHRDGLFGQIVPPVLAFVSNFPYVVTALLLFFFFG
LQLELLPLAYTYDPSIEKAFTLEFISSVAEHAILPMGSMILVGIATWVFNMRNAMINVLGEDYVTMAEAKGLSGPRVMYR
YAGRNAILPVATAIAMAIGFSFAGSIMTEVVFNYQGLGNILLKGIVARDYPLIQAILLILVSAVLTANFIADLLYVWLDP
RISN
>Mature_323_residues
SFLLRRLGFYFTAFLIAISFNFALPRMMPGDPIDALFAAAQGRMDPAQMDAVRAMYGFMDGTLFEQYISYIKSVFTLDLG
PSVLMFPIDVIDVVGMALPWTMFLALGSLIVALILGVTIGTYSSYHRDGLFGQIVPPVLAFVSNFPYVVTALLLFFFFGL
QLELLPLAYTYDPSIEKAFTLEFISSVAEHAILPMGSMILVGIATWVFNMRNAMINVLGEDYVTMAEAKGLSGPRVMYRY
AGRNAILPVATAIAMAIGFSFAGSIMTEVVFNYQGLGNILLKGIVARDYPLIQAILLILVSAVLTANFIADLLYVWLDPR
ISN

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=341, Percent_Identity=30.4985337243402, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1787053, Length=326, Percent_Identity=28.5276073619632, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789888, Length=324, Percent_Identity=30.2469135802469, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787497, Length=322, Percent_Identity=28.2608695652174, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1788504, Length=360, Percent_Identity=25, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787761, Length=318, Percent_Identity=28.9308176100629, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=25.6505576208178, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35659; Mature: 35528

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLLRRLGFYFTAFLIAISFNFALPRMMPGDPIDALFAAAQGRMDPAQMDAVRAMYGFM
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DGTLFEQYISYIKSVFTLDLGPSVLMFPIDVIDVVGMALPWTMFLALGSLIVALILGVTI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTYSSYHRDGLFGQIVPPVLAFVSNFPYVVTALLLFFFFGLQLELLPLAYTYDPSIEKAF
HCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHEEEEECCCCHHHHH
TLEFISSVAEHAILPMGSMILVGIATWVFNMRNAMINVLGEDYVTMAEAKGLSGPRVMYR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHH
YAGRNAILPVATAIAMAIGFSFAGSIMTEVVFNYQGLGNILLKGIVARDYPLIQAILLIL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH
VSAVLTANFIADLLYVWLDPRISN
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SFLLRRLGFYFTAFLIAISFNFALPRMMPGDPIDALFAAAQGRMDPAQMDAVRAMYGFM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DGTLFEQYISYIKSVFTLDLGPSVLMFPIDVIDVVGMALPWTMFLALGSLIVALILGVTI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTYSSYHRDGLFGQIVPPVLAFVSNFPYVVTALLLFFFFGLQLELLPLAYTYDPSIEKAF
HCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHEEEEECCCCHHHHH
TLEFISSVAEHAILPMGSMILVGIATWVFNMRNAMINVLGEDYVTMAEAKGLSGPRVMYR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHH
YAGRNAILPVATAIAMAIGFSFAGSIMTEVVFNYQGLGNILLKGIVARDYPLIQAILLIL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH
VSAVLTANFIADLLYVWLDPRISN
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]