| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is lgt
Identifier: 119944279
GI number: 119944279
Start: 641466
End: 642329
Strand: Direct
Name: lgt
Synonym: Ping_0505
Alternate gene names: 119944279
Gene position: 641466-642329 (Clockwise)
Preceding gene: 119944277
Following gene: 119944280
Centisome position: 14.07
GC content: 41.09
Gene sequence:
>864_bases ATGTCAGTTTCAAATTTTGTTTTACCCAAAATAGACCCCGTCGCAGTTAGTATTGGTCCTGTGGATATTCACTGGTATGG TTTGATGTATTTGCTTGGTTTTACTTTTGCTTTGTGGATGGCAAATCGTCAATGCGATAAATCAAATGGCATCTGGACAC GTGAACAAGCGAGCGATTTGCTTTTTTATGGTTTTATGGGCGTTATTTTAGGCGGCCGTATTGGATATGTTTTGTTTTAT CAATTTCCGCTGTTTTTAGATAGCCCACTTTATCTGTTTAAAATATGGGAAGGCGGGATGTCATTTCATGGTGGTGTGCT GGGTGTTACCACTGCGATTATTTTTTATGCTAAAAAGAATAAACGTTCAATTTTATCTGTCGGGGATTTTATCGTACCAC TTTTACCCGTTGGACTCGGAGCCGGGCGTATCGGTAACTTTATTAACTCTGAATTGTGGGGAAGAGTGACTGATTCTCCC TTTGGCATTATTTTCCAAAATGCAGGTCCGTTGCCCCGTCACCCATCGCAACTGTACGAATTTGCGCTGGAAGGTGTTGT CTTATTTATTATTCTCATCCTCTATATTCGTAAAGCCCGACCAGCCGGTTCAGTGGCTGGATTATTTTTACTTGCCTACG GCGTGTTTCGATTCATCGTTGAGTTTGCAAGAGAGCCAGATGCACATCTTGGATTATTAAGCTTAGGGCTAAGCATGGGG CAGTTATTATCATTGCCTATGATTTTTGCTGGAATGGCATTTATAGCTTATGCCTACAGAGCCAAAGCACAAGCACCGTC TCAAGCAGATAATGTTAAACCGCCTAAAGCAAAAACAAATAAGGCCAAAAAAAAACATGGCTAA
Upstream 100 bases:
>100_bases CCAGGTCGGTCTATAGCTTTCTGTGACGCTATTATTGGTATCATCAGATGATTAGGTTATGATACCACCCCGTTTAAAAT ACTGCTAAATGAGTCGCTAA
Downstream 100 bases:
>100_bases AAAATCATAACTCACCCGTTTAGGTAACAGAAAATGAAACAATATTTAGGATTATGTCAGCGCATTGTCGACAAGGGTAT CTGGATTGAAAACCAGCGAA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSVSNFVLPKIDPVAVSIGPVDIHWYGLMYLLGFTFALWMANRQCDKSNGIWTREQASDLLFYGFMGVILGGRIGYVLFY QFPLFLDSPLYLFKIWEGGMSFHGGVLGVTTAIIFYAKKNKRSILSVGDFIVPLLPVGLGAGRIGNFINSELWGRVTDSP FGIIFQNAGPLPRHPSQLYEFALEGVVLFIILILYIRKARPAGSVAGLFLLAYGVFRFIVEFAREPDAHLGLLSLGLSMG QLLSLPMIFAGMAFIAYAYRAKAQAPSQADNVKPPKAKTNKAKKKHG
Sequences:
>Translated_287_residues MSVSNFVLPKIDPVAVSIGPVDIHWYGLMYLLGFTFALWMANRQCDKSNGIWTREQASDLLFYGFMGVILGGRIGYVLFY QFPLFLDSPLYLFKIWEGGMSFHGGVLGVTTAIIFYAKKNKRSILSVGDFIVPLLPVGLGAGRIGNFINSELWGRVTDSP FGIIFQNAGPLPRHPSQLYEFALEGVVLFIILILYIRKARPAGSVAGLFLLAYGVFRFIVEFAREPDAHLGLLSLGLSMG QLLSLPMIFAGMAFIAYAYRAKAQAPSQADNVKPPKAKTNKAKKKHG >Mature_286_residues SVSNFVLPKIDPVAVSIGPVDIHWYGLMYLLGFTFALWMANRQCDKSNGIWTREQASDLLFYGFMGVILGGRIGYVLFYQ FPLFLDSPLYLFKIWEGGMSFHGGVLGVTTAIIFYAKKNKRSILSVGDFIVPLLPVGLGAGRIGNFINSELWGRVTDSPF GIIFQNAGPLPRHPSQLYEFALEGVVLFIILILYIRKARPAGSVAGLFLLAYGVFRFIVEFAREPDAHLGLLSLGLSMGQ LLSLPMIFAGMAFIAYAYRAKAQAPSQADNVKPPKAKTNKAKKKHG
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=287, Percent_Identity=55.4006968641115, Blast_Score=313, Evalue=8e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_PSYIN (A1SS95)
Other databases:
- EMBL: CP000510 - RefSeq: YP_941959.1 - STRING: A1SS95 - GeneID: 4623411 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0505 - eggNOG: COG0682 - HOGENOM: HBG450278 - OMA: NPIAFSL - PhylomeDB: A1SS95 - BioCyc: PING357804:PING_0505-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 31650; Mature: 31519
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x14b882e8)-; HASH(0x15fa1ad8)-; HASH(0x14fad8e0)-; HASH(0x14583118)-; HASH(0x15544cb0)-; HASH(0x15fa0980)-; HASH(0x164a5ecc)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSNFVLPKIDPVAVSIGPVDIHWYGLMYLLGFTFALWMANRQCDKSNGIWTREQASDL CCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LFYGFMGVILGGRIGYVLFYQFPLFLDSPLYLFKIWEGGMSFHGGVLGVTTAIIFYAKKN HHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHEECCC KRSILSVGDFIVPLLPVGLGAGRIGNFINSELWGRVTDSPFGIIFQNAGPLPRHPSQLYE CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH FALEGVVLFIILILYIRKARPAGSVAGLFLLAYGVFRFIVEFAREPDAHLGLLSLGLSMG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QLLSLPMIFAGMAFIAYAYRAKAQAPSQADNVKPPKAKTNKAKKKHG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure SVSNFVLPKIDPVAVSIGPVDIHWYGLMYLLGFTFALWMANRQCDKSNGIWTREQASDL CCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LFYGFMGVILGGRIGYVLFYQFPLFLDSPLYLFKIWEGGMSFHGGVLGVTTAIIFYAKKN HHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHEECCC KRSILSVGDFIVPLLPVGLGAGRIGNFINSELWGRVTDSPFGIIFQNAGPLPRHPSQLYE CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH FALEGVVLFIILILYIRKARPAGSVAGLFLLAYGVFRFIVEFAREPDAHLGLLSLGLSMG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QLLSLPMIFAGMAFIAYAYRAKAQAPSQADNVKPPKAKTNKAKKKHG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA