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The map label for this gene is tapB [H]

Identifier: 119944256

GI number: 119944256

Start: 606886

End: 608574

Strand: Direct

Name: tapB [H]

Synonym: Ping_0480

Alternate gene names: 119944256

Gene position: 606886-608574 (Clockwise)

Preceding gene: 119944255

Following gene: 119944257

Centisome position: 13.31

GC content: 45.53

Gene sequence:

>1689_bases
ATGGCAACCAATAATATTAGTGGTCTGGCATCCAGTCTTGCCACACGTGGTTTACTCCCCTTTGATAAACTTCAGCAGAT
TACCAGCGCGGCACAGCAGGATAAAAAATCCCTGGTAAGTTATCTGGTCGACAACAAATTTATCGATAGCCTGACGCTGG
CGGAGTTCTTCGAAATAGAATATGGTCTTCCGTTATTAGATGCATCTATCCTTGATCTGGATGAAATACCGGAAAAATTT
CTGAATAACAAGTTGATAGAAAAACACCATGCACTGCCGGTTTATGTGCAGGACAAAACCCTGTATATCGCCATGTCTGA
CCCCACTAATATTGCTGCGCTTGAAGACTTTGCTTTCAGCTTTGCTATCCATACCGATGCCCTGCTAGTGGAAGAGCAAT
ACCTTGCTAAAGCCATTGAAACCGTATTGGAAGATGATGTTGCTTCTTTGGGTGAAATGTCCGATATTGAGGATATTGAG
GTTGATGATTCTGATTCGCGTCTGGATGAGGCGCAGGGTAACGGCAGTGATGATGCGCCTATTGTTAAATATATTAACAG
CATTTTATTGGATGCGGTGCGCAAAGGGGCATCGGATCTGCACTTTGAACCCTATGAAAAAACCTATCGTATTCGCTTTC
GTGTTGACGGAATTTTACATCAAGTGGCCACGCCACCGGTGAATCTGGCCAACCGTTTTTCAGCCCGCCTTAAGGTTATG
TCAAAACTGGATATCGCCGAGCGTCGTTTGCCGCAGGACGGGCGTATTAAACTTAAAATTACCAATAAACGCAGTGTGGA
TTTGCGTGTCAGTACACTGCCGACCATGTGGGGCGAAAAGGTGGTAATGCGTATTCTGGACTCATCGGGAGCGAACCTGA
ATATCGACAGTTTAGGCTACAATGATAAGCAGAAAGAAAGCTACCTTAGTGCTCTGGCAAAACCGCAGGGAATGATTTTA
ATCACTGGTCCGACTGGCAGTGGTAAAACTGTTTCTTTGTATAGCGGATTAAATATTCTTAATACCGTGCAGCGTAATAT
TTCTACGGCGGAAGATCCGGTAGAGATTAATTTATCCGGTATTAATCAGGTGCAGATCAATACCAAAGCGGGATTAACCT
TTGCCTCTGCATTGCGTTCTTTTCTACGTCAAGATCCCGATATTTTGATGGTTGGTGAAATTCGTGATTTAGAAACCGCT
GAAATTGCGATCAAAGCCGCGCAAACCGGACATATGGTTTTGTCTACCCTGCATACCAACTCCGCTGCGGAAACCTTAAC
GCGTTTACTTAATATGGGTGTGCCCGCATTTAATGTCGCTTCTTCGGTGTCGCTGATTATCGCGCAGCGTTTGGCGCGGC
GTTTATGCCCTGAGTGTAAAACCGAAGAGGTTTTTGAAACGCCGGAATTAAAAACCATTGGGTTTACAGAAACCCAGATA
GCTGCGGGTATCACGCTCTATAAACCCGTTGGTTGTTCAAAATGTACTGAAGGTTATAAAGGCCGAGTGGGTATCTACGA
AGTGATGCAGATGAGCGAGACGATTGGTCACCTTATTTTAAACAATGGTAATGCTCCGGAGATCGCCAAGCTGGCCGAGG
CCGAGGGGATGGATACACTGCGTCAGTCAGCACTGCAGCAGGTGTTAAAGGGGATCACCAGTTTAACGGAAGTGACCCGG
GTAACCTAA

Upstream 100 bases:

>100_bases
CGCTTAAAATTTTAACTGGCATCCAAAGACAAGTAAAAATGGTCACATTGTTACTGCTTAGGATGGTGTTTGTACCCCTA
CCACTATTTGTTAATACTTA

Downstream 100 bases:

>100_bases
ATTTTTAGGCTGTGAGTTAGAATCTGACCGACAGTCTTAATTTTTCACCCTGTAACTGCTTTTCTCTTTATAAAGATCCT
GCGCAATTTCAATAAACCAA

Product: type IV-A pilus assembly ATPase PilB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MATNNISGLASSLATRGLLPFDKLQQITSAAQQDKKSLVSYLVDNKFIDSLTLAEFFEIEYGLPLLDASILDLDEIPEKF
LNNKLIEKHHALPVYVQDKTLYIAMSDPTNIAALEDFAFSFAIHTDALLVEEQYLAKAIETVLEDDVASLGEMSDIEDIE
VDDSDSRLDEAQGNGSDDAPIVKYINSILLDAVRKGASDLHFEPYEKTYRIRFRVDGILHQVATPPVNLANRFSARLKVM
SKLDIAERRLPQDGRIKLKITNKRSVDLRVSTLPTMWGEKVVMRILDSSGANLNIDSLGYNDKQKESYLSALAKPQGMIL
ITGPTGSGKTVSLYSGLNILNTVQRNISTAEDPVEINLSGINQVQINTKAGLTFASALRSFLRQDPDILMVGEIRDLETA
EIAIKAAQTGHMVLSTLHTNSAAETLTRLLNMGVPAFNVASSVSLIIAQRLARRLCPECKTEEVFETPELKTIGFTETQI
AAGITLYKPVGCSKCTEGYKGRVGIYEVMQMSETIGHLILNNGNAPEIAKLAEAEGMDTLRQSALQQVLKGITSLTEVTR
VT

Sequences:

>Translated_562_residues
MATNNISGLASSLATRGLLPFDKLQQITSAAQQDKKSLVSYLVDNKFIDSLTLAEFFEIEYGLPLLDASILDLDEIPEKF
LNNKLIEKHHALPVYVQDKTLYIAMSDPTNIAALEDFAFSFAIHTDALLVEEQYLAKAIETVLEDDVASLGEMSDIEDIE
VDDSDSRLDEAQGNGSDDAPIVKYINSILLDAVRKGASDLHFEPYEKTYRIRFRVDGILHQVATPPVNLANRFSARLKVM
SKLDIAERRLPQDGRIKLKITNKRSVDLRVSTLPTMWGEKVVMRILDSSGANLNIDSLGYNDKQKESYLSALAKPQGMIL
ITGPTGSGKTVSLYSGLNILNTVQRNISTAEDPVEINLSGINQVQINTKAGLTFASALRSFLRQDPDILMVGEIRDLETA
EIAIKAAQTGHMVLSTLHTNSAAETLTRLLNMGVPAFNVASSVSLIIAQRLARRLCPECKTEEVFETPELKTIGFTETQI
AAGITLYKPVGCSKCTEGYKGRVGIYEVMQMSETIGHLILNNGNAPEIAKLAEAEGMDTLRQSALQQVLKGITSLTEVTR
VT
>Mature_561_residues
ATNNISGLASSLATRGLLPFDKLQQITSAAQQDKKSLVSYLVDNKFIDSLTLAEFFEIEYGLPLLDASILDLDEIPEKFL
NNKLIEKHHALPVYVQDKTLYIAMSDPTNIAALEDFAFSFAIHTDALLVEEQYLAKAIETVLEDDVASLGEMSDIEDIEV
DDSDSRLDEAQGNGSDDAPIVKYINSILLDAVRKGASDLHFEPYEKTYRIRFRVDGILHQVATPPVNLANRFSARLKVMS
KLDIAERRLPQDGRIKLKITNKRSVDLRVSTLPTMWGEKVVMRILDSSGANLNIDSLGYNDKQKESYLSALAKPQGMILI
TGPTGSGKTVSLYSGLNILNTVQRNISTAEDPVEINLSGINQVQINTKAGLTFASALRSFLRQDPDILMVGEIRDLETAE
IAIKAAQTGHMVLSTLHTNSAAETLTRLLNMGVPAFNVASSVSLIIAQRLARRLCPECKTEEVFETPELKTIGFTETQIA
AGITLYKPVGCSKCTEGYKGRVGIYEVMQMSETIGHLILNNGNAPEIAKLAEAEGMDTLRQSALQQVLKGITSLTEVTRV
T

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=389, Percent_Identity=46.5295629820051, Blast_Score=363, Evalue=1e-101,
Organism=Escherichia coli, GI1786296, Length=382, Percent_Identity=45.2879581151832, Blast_Score=349, Evalue=3e-97,
Organism=Escherichia coli, GI87082188, Length=377, Percent_Identity=29.1777188328912, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013374
- InterPro:   IPR007831
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 61682; Mature: 61551

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNNISGLASSLATRGLLPFDKLQQITSAAQQDKKSLVSYLVDNKFIDSLTLAEFFEIE
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLPLLDASILDLDEIPEKFLNNKLIEKHHALPVYVQDKTLYIAMSDPTNIAALEDFAFS
CCCCCCCHHHCCHHHHHHHHHCCHHHHHHCCCEEEEECCEEEEEECCCCCCHHHHHHHHH
FAIHTDALLVEEQYLAKAIETVLEDDVASLGEMSDIEDIEVDDSDSRLDEAQGNGSDDAP
HEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCH
IVKYINSILLDAVRKGASDLHFEPYEKTYRIRFRVDGILHQVATPPVNLANRFSARLKVM
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHH
SKLDIAERRLPQDGRIKLKITNKRSVDLRVSTLPTMWGEKVVMRILDSSGANLNIDSLGY
HHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCC
NDKQKESYLSALAKPQGMILITGPTGSGKTVSLYSGLNILNTVQRNISTAEDPVEINLSG
CCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEECC
INQVQINTKAGLTFASALRSFLRQDPDILMVGEIRDLETAEIAIKAAQTGHMVLSTLHTN
CCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHEEEECCCCHHHHHHHHCC
SAAETLTRLLNMGVPAFNVASSVSLIIAQRLARRLCPECKTEEVFETPELKTIGFTETQI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEECCCHHHH
AAGITLYKPVGCSKCTEGYKGRVGIYEVMQMSETIGHLILNNGNAPEIAKLAEAEGMDTL
HCCEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCHHHH
RQSALQQVLKGITSLTEVTRVT
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATNNISGLASSLATRGLLPFDKLQQITSAAQQDKKSLVSYLVDNKFIDSLTLAEFFEIE
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLPLLDASILDLDEIPEKFLNNKLIEKHHALPVYVQDKTLYIAMSDPTNIAALEDFAFS
CCCCCCCHHHCCHHHHHHHHHCCHHHHHHCCCEEEEECCEEEEEECCCCCCHHHHHHHHH
FAIHTDALLVEEQYLAKAIETVLEDDVASLGEMSDIEDIEVDDSDSRLDEAQGNGSDDAP
HEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCH
IVKYINSILLDAVRKGASDLHFEPYEKTYRIRFRVDGILHQVATPPVNLANRFSARLKVM
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHH
SKLDIAERRLPQDGRIKLKITNKRSVDLRVSTLPTMWGEKVVMRILDSSGANLNIDSLGY
HHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCC
NDKQKESYLSALAKPQGMILITGPTGSGKTVSLYSGLNILNTVQRNISTAEDPVEINLSG
CCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEECC
INQVQINTKAGLTFASALRSFLRQDPDILMVGEIRDLETAEIAIKAAQTGHMVLSTLHTN
CCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHEEEECCCCHHHHHHHHCC
SAAETLTRLLNMGVPAFNVASSVSLIIAQRLARRLCPECKTEEVFETPELKTIGFTETQI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEECCCHHHH
AAGITLYKPVGCSKCTEGYKGRVGIYEVMQMSETIGHLILNNGNAPEIAKLAEAEGMDTL
HCCEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCHHHH
RQSALQQVLKGITSLTEVTRVT
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]