| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944227
Identifier: 119944227
GI number: 119944227
Start: 572757
End: 573893
Strand: Reverse
Name: 119944227
Synonym: Ping_0450
Alternate gene names: NA
Gene position: 573893-572757 (Counterclockwise)
Preceding gene: 119944228
Following gene: 119944226
Centisome position: 12.59
GC content: 35.18
Gene sequence:
>1137_bases ATGGATATAAATGTAGATATAAATGTAGATATCACCATTATTGGTGGTGGTTTTTTTGGATTATACCTTGCTGAGTATTT CTCTCGTCTGAATAAAAAAGTGCTTGTTATTGAAAAAGAGAACGATGCGATGCAAAGAGCCTCATATAACAATCAAGCTC GAGTGCATAACGGCTATCATTATCCACGAAGTGTGCTGACAGCTTTACGGTCACGTATTTCATTTCCACGTTTTGTAGAT GAATTTAAACCCTGTATTGATAACGATTTCGATAAATATTATATGATTTCAAATCGATTAGGTAAAATCACACCAAATCA GTTCCAAAAATTTTGCGATCGCATCGGTGCAACACATGAATCTGCACCACCTGAAATTCAACGTTTAATTCAACCTAATA TGATTGATGGCATATTCAAAGTTAAGGAATTTGCTTTTGATTCTGTTTTATTAAAAAAAACAATGCTTGATCGTATTCAA AATAGTGGTGTCGATATACTATTTAACCACAACGTGAAGACTATCAAGCAGCATCAATCAACTTCACGACTTGAATTAAA AATTGATTCTGACACTGAAACTATCAACATATCAAGCAAACAGGTTTACAACTGCACCTATTCATTACTTAATTCAGTAC TCAATGGTTCAAACATTGAGCTTATCCCTCTTCGACATGAAATGACTGAAATGTGTGTCGTTGATGTGCCCGATGAGTTA AAAAAAGTCGGGATCACCGTTATGTGTGGTCCCTTTTTTTCAGTTATGCCATTCCCTTCCAAACAAGCTCATTCTTTTAG CCATGTACGCTATACCCCGCATTATGAATGGGATGATAATAATCAATCTCCCTACGTAGATGCTCATAAGCTTTATAGTG AAAGCTTTAAACGCAGTGCATGGAAGAAAATGAAATTAGATGCGCAACGATATATCCCTATTTTGGCAGACGTAAAATAC AAAGAGTCTCTCTGGGAAGTCAAAACAATATTACCAAGAAGTGAAACGGATGATTCTAGACCTATCTTATTTAAAGCTAA CTATGGCTTACCAGGCTTACACTGTGTAATGGGTGGAAAAATCGATAATATTTACGATGTCATACAAACCATTAATAATT TAGGGTTGGATGTATAA
Upstream 100 bases:
>100_bases TGCCTCTGTTTTATTGTTTGGAGAAAACCTCTCAATAATTAATGTAGCTGGGATATTTTTTATTATTATTGGTGTTTGGG CATTAACGGTGAATTAATAT
Downstream 100 bases:
>100_bases TGAAAAGTGAAATATTTGTATCTGTCGTTTTGATTGTAAAAAACCAGACAGATAAACTAATAAACTATTTAGATAAACTT TCCCCCTATTTGAATGAGCA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: D Amino Acid Oxidase Family Protein
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYHYPRSVLTALRSRISFPRFVD EFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHESAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQ NSGVDILFNHNVKTIKQHQSTSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSAWKKMKLDAQRYIPILADVKY KESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGKIDNIYDVIQTINNLGLDV
Sequences:
>Translated_378_residues MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYHYPRSVLTALRSRISFPRFVD EFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHESAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQ NSGVDILFNHNVKTIKQHQSTSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSAWKKMKLDAQRYIPILADVKY KESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGKIDNIYDVIQTINNLGLDV >Mature_378_residues MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYHYPRSVLTALRSRISFPRFVD EFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHESAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQ NSGVDILFNHNVKTIKQHQSTSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSAWKKMKLDAQRYIPILADVKY KESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGKIDNIYDVIQTINNLGLDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43558; Mature: 43558
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYH CCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEECCCCC YPRSVLTALRSRISFPRFVDEFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHE CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC SAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQNSGVDILFNHNVKTIKQHQS CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCC TSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL CCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHEEECCCHHH KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSA HHCCEEEEECCCHHHCCCCCHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH WKKMKLDAQRYIPILADVKYKESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGK HHHHHCCHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCC IDNIYDVIQTINNLGLDV HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYH CCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEECCCCC YPRSVLTALRSRISFPRFVDEFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHE CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC SAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQNSGVDILFNHNVKTIKQHQS CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCC TSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL CCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHEEECCCHHH KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSA HHCCEEEEECCCHHHCCCCCHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH WKKMKLDAQRYIPILADVKYKESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGK HHHHHCCHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCC IDNIYDVIQTINNLGLDV HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA