| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944223
Identifier: 119944223
GI number: 119944223
Start: 567551
End: 568975
Strand: Reverse
Name: 119944223
Synonym: Ping_0446
Alternate gene names: NA
Gene position: 568975-567551 (Counterclockwise)
Preceding gene: 119944224
Following gene: 119944222
Centisome position: 12.48
GC content: 29.12
Gene sequence:
>1425_bases ATGTTAAATAGAGCAAACCTAGAACATAAGACATTTCAATTAATGATAATACCTTGTTTGCTCCTCCTTTTTTCTTTTCT CTCTTATCAAGAAAATTTATTTAGAGTGATATCTGACCCTTCTTTTAATCGGTTTCAATATGCTTCTGAAATTTTGGTTA TTGATGGTCTTAATTACACGAAAAATACGGGGAAAGATTTATCATTAGGTCATTATGAGCGACTAAAAAAAACTATTTAT CCTGATTCATATTTACTTGCAAAAAAATCATTTAATGGAAAATTGAATGAAAAAGAAACTAAGTTTGATCCCTATACTTC ACAGATAGGATTACAATTATATTTTTATTCATTTTTATCAAATAATATCAATATGAGTATACAAAATTTAAAACAAATCA CTTCATTACTAATGAGTTTTGTTGTTTTACTTTTTTATTTTCCTATTAAAAAAGAATTTGGATTTTTATCTGCAATTGGC TTTTCCGTCATTTTCATTTTTAGCCCATGGGTTGTTACCTTTTCAAACAACCTGTACTGGGCGATGTTTACTTGGTTTAT CCCTATATTAATTACATTTTATCTATCTCATTCGGCATTTAAATCCAGTAAAAGGTTGTTGATAATGTCCTGCCTGTTGA TAATTTCATTTTTAATTAAATTTTTATGTGGATATGAATATATAACAACAATTGCAATAACATCATGCCTCCCCATATTT TATTGGGGTTTTAAGACAAAGGTTACAAATGTAAAAATAATATATGTACTATCCTCAGTTATATTTTCCTTTTTGGCTGC CTTTATCATTTCACTTGTTTTGTATTCCTCAGTATACGGTAGTAGCAACTTAGAAAAAATAGTTACCAAAAGGGTTTTAT ATTCAGATATTCAAAAACAAATAAATGATTATTGCAAAGACAATAAGACACAAGATTGTAAGGATGAATTCATTAAAGAC TATGCGCCATCCTTAAATGCAAACCCAATCAAAGTCGTTGCTACCTACTTTAAGTTTAGGTCATTTCTCCCTTGGTCCGG CCCACAAGATGGGGAGGTAATAAGCGCTGACAAAATAAAAATCAAAAAATGGATCAAGCAACCTTATTTGTATGAAAATA TTATTAATTTAGAAAAACAGAGTTATAAGTACATGCTAGAAACCGTTTTAAATATGATTTTATTCTTAATTTTTAATATA TTGATTTGTAGAAAGGCAATGAAATCACAAGATAAAAAAGATATTATTTTAATTGCAACTGCTTTTTTAGCCCCCATATC TTGGTATGCTTTAGCCAAAGGGCACTCATATCTCCATACACATATAAATTACATATTGTGGTATATATTGTACGTGCCGT TAGGAATGGCTTATTTACTAAAGAACGATAGCCCATGTGTTAATCGCACAGTAAACCAAGCTTAA
Upstream 100 bases:
>100_bases AGAACATACCCGAAAGGGAAAGTACCTACAAAAATATCGCCTATCAAAGGTAATTTAAATATAATTAAAACGCTAATATT TACTAGTATGGGCGGTTATA
Downstream 100 bases:
>100_bases GGCATGCTTTGGAATTTATTTTGAAGCTAAGTCATATCCTCGTTAAGCACAATCGGTGTCCTGACTTTATAATTGTTTAT AACTGGGCTTAACCAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MLNRANLEHKTFQLMIIPCLLLLFSFLSYQENLFRVISDPSFNRFQYASEILVIDGLNYTKNTGKDLSLGHYERLKKTIY PDSYLLAKKSFNGKLNEKETKFDPYTSQIGLQLYFYSFLSNNINMSIQNLKQITSLLMSFVVLLFYFPIKKEFGFLSAIG FSVIFIFSPWVVTFSNNLYWAMFTWFIPILITFYLSHSAFKSSKRLLIMSCLLIISFLIKFLCGYEYITTIAITSCLPIF YWGFKTKVTNVKIIYVLSSVIFSFLAAFIISLVLYSSVYGSSNLEKIVTKRVLYSDIQKQINDYCKDNKTQDCKDEFIKD YAPSLNANPIKVVATYFKFRSFLPWSGPQDGEVISADKIKIKKWIKQPYLYENIINLEKQSYKYMLETVLNMILFLIFNI LICRKAMKSQDKKDIILIATAFLAPISWYALAKGHSYLHTHINYILWYILYVPLGMAYLLKNDSPCVNRTVNQA
Sequences:
>Translated_474_residues MLNRANLEHKTFQLMIIPCLLLLFSFLSYQENLFRVISDPSFNRFQYASEILVIDGLNYTKNTGKDLSLGHYERLKKTIY PDSYLLAKKSFNGKLNEKETKFDPYTSQIGLQLYFYSFLSNNINMSIQNLKQITSLLMSFVVLLFYFPIKKEFGFLSAIG FSVIFIFSPWVVTFSNNLYWAMFTWFIPILITFYLSHSAFKSSKRLLIMSCLLIISFLIKFLCGYEYITTIAITSCLPIF YWGFKTKVTNVKIIYVLSSVIFSFLAAFIISLVLYSSVYGSSNLEKIVTKRVLYSDIQKQINDYCKDNKTQDCKDEFIKD YAPSLNANPIKVVATYFKFRSFLPWSGPQDGEVISADKIKIKKWIKQPYLYENIINLEKQSYKYMLETVLNMILFLIFNI LICRKAMKSQDKKDIILIATAFLAPISWYALAKGHSYLHTHINYILWYILYVPLGMAYLLKNDSPCVNRTVNQA >Mature_474_residues MLNRANLEHKTFQLMIIPCLLLLFSFLSYQENLFRVISDPSFNRFQYASEILVIDGLNYTKNTGKDLSLGHYERLKKTIY PDSYLLAKKSFNGKLNEKETKFDPYTSQIGLQLYFYSFLSNNINMSIQNLKQITSLLMSFVVLLFYFPIKKEFGFLSAIG FSVIFIFSPWVVTFSNNLYWAMFTWFIPILITFYLSHSAFKSSKRLLIMSCLLIISFLIKFLCGYEYITTIAITSCLPIF YWGFKTKVTNVKIIYVLSSVIFSFLAAFIISLVLYSSVYGSSNLEKIVTKRVLYSDIQKQINDYCKDNKTQDCKDEFIKD YAPSLNANPIKVVATYFKFRSFLPWSGPQDGEVISADKIKIKKWIKQPYLYENIINLEKQSYKYMLETVLNMILFLIFNI LICRKAMKSQDKKDIILIATAFLAPISWYALAKGHSYLHTHINYILWYILYVPLGMAYLLKNDSPCVNRTVNQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55231; Mature: 55231
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRANLEHKTFQLMIIPCLLLLFSFLSYQENLFRVISDPSFNRFQYASEILVIDGLNYT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCCC KNTGKDLSLGHYERLKKTIYPDSYLLAKKSFNGKLNEKETKFDPYTSQIGLQLYFYSFLS CCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC NNINMSIQNLKQITSLLMSFVVLLFYFPIKKEFGFLSAIGFSVIFIFSPWVVTFSNNLYW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCCHH AMFTWFIPILITFYLSHSAFKSSKRLLIMSCLLIISFLIKFLCGYEYITTIAITSCLPIF HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH YWGFKTKVTNVKIIYVLSSVIFSFLAAFIISLVLYSSVYGSSNLEKIVTKRVLYSDIQKQ HHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH INDYCKDNKTQDCKDEFIKDYAPSLNANPIKVVATYFKFRSFLPWSGPQDGEVISADKIK HHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHH IKKWIKQPYLYENIINLEKQSYKYMLETVLNMILFLIFNILICRKAMKSQDKKDIILIAT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHH AFLAPISWYALAKGHSYLHTHINYILWYILYVPLGMAYLLKNDSPCVNRTVNQA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC >Mature Secondary Structure MLNRANLEHKTFQLMIIPCLLLLFSFLSYQENLFRVISDPSFNRFQYASEILVIDGLNYT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCCC KNTGKDLSLGHYERLKKTIYPDSYLLAKKSFNGKLNEKETKFDPYTSQIGLQLYFYSFLS CCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC NNINMSIQNLKQITSLLMSFVVLLFYFPIKKEFGFLSAIGFSVIFIFSPWVVTFSNNLYW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCCHH AMFTWFIPILITFYLSHSAFKSSKRLLIMSCLLIISFLIKFLCGYEYITTIAITSCLPIF HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH YWGFKTKVTNVKIIYVLSSVIFSFLAAFIISLVLYSSVYGSSNLEKIVTKRVLYSDIQKQ HHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH INDYCKDNKTQDCKDEFIKDYAPSLNANPIKVVATYFKFRSFLPWSGPQDGEVISADKIK HHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHH IKKWIKQPYLYENIINLEKQSYKYMLETVLNMILFLIFNILICRKAMKSQDKKDIILIAT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHH AFLAPISWYALAKGHSYLHTHINYILWYILYVPLGMAYLLKNDSPCVNRTVNQA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA