| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944116
Identifier: 119944116
GI number: 119944116
Start: 430809
End: 431645
Strand: Reverse
Name: 119944116
Synonym: Ping_0331
Alternate gene names: NA
Gene position: 431645-430809 (Counterclockwise)
Preceding gene: 119944117
Following gene: 119944114
Centisome position: 9.47
GC content: 33.81
Gene sequence:
>837_bases ATGGCTAATAATCAACCTGAAAACTATAAGGCATCAATAATTATTGCTTTTTACAATAATATTGAGGCGTTAAAACTCGT TTTTAAAGCGCTAGAAAAGCAAACTGAAAATAATTTTGAAGTGATCATTGCTGACGACGGTTCAAAAAGTGAAATTGTAA AAGAGTTAAATACACTTAGCGAACAGAGCACTCTAACTATTCAGCATTTATGGCAAGAAGATATCGGCTTTAGAAAAAAT AGATGCTTAAATAAAGCGGTACAAGCCTCTCGAAGTAACTACTTAATCTTTATAGACGGAGATTGTATTCCTCAATGTTA TTTTATTGAAGACCATTTAAGCGAAGCTGAGCAAGGTGTTTGCCTTAATGGACGCCGAGCAGATCTTTCCCATAAAATGT CTCAGCTTTTGAGAGAGTGTGATAATCCGGCTTGCTTCATATCACAACATCGCACTAAACTGTTATTTGATTATTTGTTT GGTAATGGTAAAAATATTGAGAAAGGCTTTCGAATTACTAATACCCCATTAAGAAAGGCCATTCAAAAGAAGAATAAAGG GCTGGTTGGTTGTAATTTTTCTTTATTTAAACAAGATTTATTTAACATTAATGGATTTGATCAGCGCTATGAAGCGCCGG GGATCGGCGAAGACAGTGATATAGACTTTCGTCTAGGTATTGCAGGAATTATGATTAAGCCACTTTTTTATAAAGCGAAT CAGGTTCACCTTCAACATAAAGAATTGCCAAGATCTGATGTTAATTCTGCTTTATTTAAAAAAATTAGAAAAGAAAAAAA AGCGTGGACAAATTTTGGCATAGTGCAAAATAAGTAG
Upstream 100 bases:
>100_bases ATGCACAGATATATTTGCAGGCAACATTCAAACTATCTTTTTAACATCCGCCGTTGTTAGATATTATTTGAATACAAAGT GCAATGTAAAAAGGAAATAT
Downstream 100 bases:
>100_bases CTTACAACTCGTTAAGTGAACTGACGTTAAAAATCAACTTACAAGCTAATTTTGATAGCCAAAAATTAAAGAAAGCCAAT CCTGTTCAGACCAATTTAAG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase; Lipooligosaccharide Biosynthesis Glycosyltransferase; Two-Domain Glycosyltransferase; Lipooligosaccharide Glycosyltransferase; Two-Domain Glucosyltransferase; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Gt2F; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MANNQPENYKASIIIAFYNNIEALKLVFKALEKQTENNFEVIIADDGSKSEIVKELNTLSEQSTLTIQHLWQEDIGFRKN RCLNKAVQASRSNYLIFIDGDCIPQCYFIEDHLSEAEQGVCLNGRRADLSHKMSQLLRECDNPACFISQHRTKLLFDYLF GNGKNIEKGFRITNTPLRKAIQKKNKGLVGCNFSLFKQDLFNINGFDQRYEAPGIGEDSDIDFRLGIAGIMIKPLFYKAN QVHLQHKELPRSDVNSALFKKIRKEKKAWTNFGIVQNK
Sequences:
>Translated_278_residues MANNQPENYKASIIIAFYNNIEALKLVFKALEKQTENNFEVIIADDGSKSEIVKELNTLSEQSTLTIQHLWQEDIGFRKN RCLNKAVQASRSNYLIFIDGDCIPQCYFIEDHLSEAEQGVCLNGRRADLSHKMSQLLRECDNPACFISQHRTKLLFDYLF GNGKNIEKGFRITNTPLRKAIQKKNKGLVGCNFSLFKQDLFNINGFDQRYEAPGIGEDSDIDFRLGIAGIMIKPLFYKAN QVHLQHKELPRSDVNSALFKKIRKEKKAWTNFGIVQNK >Mature_277_residues ANNQPENYKASIIIAFYNNIEALKLVFKALEKQTENNFEVIIADDGSKSEIVKELNTLSEQSTLTIQHLWQEDIGFRKNR CLNKAVQASRSNYLIFIDGDCIPQCYFIEDHLSEAEQGVCLNGRRADLSHKMSQLLRECDNPACFISQHRTKLLFDYLFG NGKNIEKGFRITNTPLRKAIQKKNKGLVGCNFSLFKQDLFNINGFDQRYEAPGIGEDSDIDFRLGIAGIMIKPLFYKANQ VHLQHKELPRSDVNSALFKKIRKEKKAWTNFGIVQNK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31902; Mature: 31771
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNQPENYKASIIIAFYNNIEALKLVFKALEKQTENNFEVIIADDGSKSEIVKELNTLS CCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH EQSTLTIQHLWQEDIGFRKNRCLNKAVQASRSNYLIFIDGDCIPQCYFIEDHLSEAEQGV HCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHCCC CLNGRRADLSHKMSQLLRECDNPACFISQHRTKLLFDYLFGNGKNIEKGFRITNTPLRKA CCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHH IQKKNKGLVGCNFSLFKQDLFNINGFDQRYEAPGIGEDSDIDFRLGIAGIMIKPLFYKAN HHHHCCCEEECCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCEEEECHHHHHHHHHHHCCC QVHLQHKELPRSDVNSALFKKIRKEKKAWTNFGIVQNK CEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure ANNQPENYKASIIIAFYNNIEALKLVFKALEKQTENNFEVIIADDGSKSEIVKELNTLS CCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH EQSTLTIQHLWQEDIGFRKNRCLNKAVQASRSNYLIFIDGDCIPQCYFIEDHLSEAEQGV HCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHCCC CLNGRRADLSHKMSQLLRECDNPACFISQHRTKLLFDYLFGNGKNIEKGFRITNTPLRKA CCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHH IQKKNKGLVGCNFSLFKQDLFNINGFDQRYEAPGIGEDSDIDFRLGIAGIMIKPLFYKAN HHHHCCCEEECCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCEEEECHHHHHHHHHHHCCC QVHLQHKELPRSDVNSALFKKIRKEKKAWTNFGIVQNK CEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA