Click here to switch to the map view.

The map label for this gene is opsX [H]

Identifier: 119944114

GI number: 119944114

Start: 428896

End: 429942

Strand: Reverse

Name: opsX [H]

Synonym: Ping_0329

Alternate gene names: 119944114

Gene position: 429942-428896 (Counterclockwise)

Preceding gene: 119944116

Following gene: 119944113

Centisome position: 9.43

GC content: 45.75

Gene sequence:

>1047_bases
ATGCCCCTGTTCACCAGCGCCCCTAACTCAATCTGTATTCTACGCCTCAGTGCGATTGGCGATGTCTGCCATGCCATTGC
ATGCCTACAGGCCATACAAAGACAATGGCCTAGCACCAAAATAACTTGGGTAACAGGGAAATTAGAGGCGCAACTGCTGC
AGCATATTAGTGGCATTGAGGTGATAATTTTTGATAAAAAACAGGGGTGGAAAGCTTACAAGCAGTTACGCTGTCGGTTA
AAAGATCGCAAATTTGATGTCCTGCTGCATATGCAGGCGGCACTGCGGGCAAGTATTGCAAGCTTAATGATCAAAGCTGA
TATCAAACTGGGTTTTGACAGGCCGCGCGCAAAAGACGGACAGTGGCTATTTACCAACTGTAAAATAGAGCAGGGAAAAT
CGGTCCATGTGTTAGATGGATTTATGGCCTTTGCCAAAAAACTTGGCATCTCTGACCTTTCGGTTAAGTGGAATATTAAC
ATTCCGATTGCAAGCGAGGAAAAAGCCACCACCCTGATTGATAATAAACCCACTTTTATTATCTGCCCGGCGGCCAGCAA
GGCTTATAAAAACTGGACTATTGAAGGTTACAGTGCACTTGCGAACCATGCTATTAAACAAGGTTTTCAAGTGCTTATTT
GTGGTGCCCCGACAGAGATTGAAAAAGCACTGGCAAAAAAAATTGTCGCCAGCAGCAATCAACAAGCCAAAAACTTAATC
GGGCAAACCTCTCTGATTGACCTGCTGGCCTTAATCAAGCAAGCCTCGATTGTGCTGGCCCCTGACACGGGGCCGACGCA
TATGGCCACCATGGTTAATACACCGGTTATCGGTTTATATGCTCACCACAACCCTAAACGTACCGGCCCGTACGCGCAGC
TTAGTCATGTTGTCAGCGTTTATGATACGTTAATAACAGAACAAAGCGGCAAAACGGCCGAGGAATTACCCTGGCGGGCA
CGCGTAAAAGATGAAAATGCGATGCAGAAAATAGCCATAAAAGTGGTGATCACTATGTTTGATAACCTTTGCCAAAAACA
GGAATAA

Upstream 100 bases:

>100_bases
AAGGTCTGTTATTTTACATTAGCGGCGCCCCTTTGCATAATGTATCGATTATCATTTAATTTTTTTGCTCACCTTTGTGT
TTTTTCTAAATAGGTAAATT

Downstream 100 bases:

>100_bases
ATCAATGTCAAAAAATAGTATCAGCGCCATTATCATCACCAAAAATGAGCAAAATAACCTACCAGCTTGTTTAGACTCGC
TACGCTGGGTTGATGAACTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MPLFTSAPNSICILRLSAIGDVCHAIACLQAIQRQWPSTKITWVTGKLEAQLLQHISGIEVIIFDKKQGWKAYKQLRCRL
KDRKFDVLLHMQAALRASIASLMIKADIKLGFDRPRAKDGQWLFTNCKIEQGKSVHVLDGFMAFAKKLGISDLSVKWNIN
IPIASEEKATTLIDNKPTFIICPAASKAYKNWTIEGYSALANHAIKQGFQVLICGAPTEIEKALAKKIVASSNQQAKNLI
GQTSLIDLLALIKQASIVLAPDTGPTHMATMVNTPVIGLYAHHNPKRTGPYAQLSHVVSVYDTLITEQSGKTAEELPWRA
RVKDENAMQKIAIKVVITMFDNLCQKQE

Sequences:

>Translated_348_residues
MPLFTSAPNSICILRLSAIGDVCHAIACLQAIQRQWPSTKITWVTGKLEAQLLQHISGIEVIIFDKKQGWKAYKQLRCRL
KDRKFDVLLHMQAALRASIASLMIKADIKLGFDRPRAKDGQWLFTNCKIEQGKSVHVLDGFMAFAKKLGISDLSVKWNIN
IPIASEEKATTLIDNKPTFIICPAASKAYKNWTIEGYSALANHAIKQGFQVLICGAPTEIEKALAKKIVASSNQQAKNLI
GQTSLIDLLALIKQASIVLAPDTGPTHMATMVNTPVIGLYAHHNPKRTGPYAQLSHVVSVYDTLITEQSGKTAEELPWRA
RVKDENAMQKIAIKVVITMFDNLCQKQE
>Mature_347_residues
PLFTSAPNSICILRLSAIGDVCHAIACLQAIQRQWPSTKITWVTGKLEAQLLQHISGIEVIIFDKKQGWKAYKQLRCRLK
DRKFDVLLHMQAALRASIASLMIKADIKLGFDRPRAKDGQWLFTNCKIEQGKSVHVLDGFMAFAKKLGISDLSVKWNINI
PIASEEKATTLIDNKPTFIICPAASKAYKNWTIEGYSALANHAIKQGFQVLICGAPTEIEKALAKKIVASSNQQAKNLIG
QTSLIDLLALIKQASIVLAPDTGPTHMATMVNTPVIGLYAHHNPKRTGPYAQLSHVVSVYDTLITEQSGKTAEELPWRAR
VKDENAMQKIAIKVVITMFDNLCQKQE

Specific function: Heptose Transfer To The Lipopolysaccharide Core. It Transfers The Innnermost Heptose To [4'-P](3-Deoxy-D-Manno- Octulosonic Acid)2-IVa. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=301, Percent_Identity=23.9202657807309, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1790050, Length=149, Percent_Identity=29.5302013422819, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38554; Mature: 38422

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFTSAPNSICILRLSAIGDVCHAIACLQAIQRQWPSTKITWVTGKLEAQLLQHISGIE
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCE
VIIFDKKQGWKAYKQLRCRLKDRKFDVLLHMQAALRASIASLMIKADIKLGFDRPRAKDG
EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC
QWLFTNCKIEQGKSVHVLDGFMAFAKKLGISDLSVKWNINIPIASEEKATTLIDNKPTFI
CEEEEEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEECCCCCEE
ICPAASKAYKNWTIEGYSALANHAIKQGFQVLICGAPTEIEKALAKKIVASSNQQAKNLI
EECCCCHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHH
GQTSLIDLLALIKQASIVLAPDTGPTHMATMVNTPVIGLYAHHNPKRTGPYAQLSHVVSV
CHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHH
YDTLITEQSGKTAEELPWRARVKDENAMQKIAIKVVITMFDNLCQKQE
HHHHHHCCCCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLFTSAPNSICILRLSAIGDVCHAIACLQAIQRQWPSTKITWVTGKLEAQLLQHISGIE
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCE
VIIFDKKQGWKAYKQLRCRLKDRKFDVLLHMQAALRASIASLMIKADIKLGFDRPRAKDG
EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC
QWLFTNCKIEQGKSVHVLDGFMAFAKKLGISDLSVKWNINIPIASEEKATTLIDNKPTFI
CEEEEEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEECCCCCEE
ICPAASKAYKNWTIEGYSALANHAIKQGFQVLICGAPTEIEKALAKKIVASSNQQAKNLI
EECCCCHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHH
GQTSLIDLLALIKQASIVLAPDTGPTHMATMVNTPVIGLYAHHNPKRTGPYAQLSHVVSV
CHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHH
YDTLITEQSGKTAEELPWRARVKDENAMQKIAIKVVITMFDNLCQKQE
HHHHHHCCCCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]