| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yigP [H]
Identifier: 119944107
GI number: 119944107
Start: 421720
End: 422352
Strand: Reverse
Name: yigP [H]
Synonym: Ping_0322
Alternate gene names: 119944107
Gene position: 422352-421720 (Counterclockwise)
Preceding gene: 119944108
Following gene: 119944106
Centisome position: 9.26
GC content: 38.86
Gene sequence:
>633_bases ATGCCATTAGATAAGCTAGTTTGCGGTTTTCTTGAAACCACTGTAAATAAATTACAGCAACTTGATTCAAGCGCATTACA AAGACGTAAACAACTTAATGGCACTATTATTGGCGTCGCCCTAAAAGAGATTAATAAACCGCTCTATTTTGTGATCAGTA CACAACAAATTGATATTTTGTCTCATTATGAAGGGCAGGCAGACTGTTTTATTCGCTTAAACATTTCAGCACTAAAAGAG TTACAAAATAATCATCAACTCACGCATTTAATTAAAACGGAACAACTCGAGGTAGAGGGTGACATTAAAATAGTACAGCG CTTCGCACGTTTACTCACCGAGATGGATATTGACTGGGAGGAACACTTGTCAGCTATTATTGGCGATATCCTCGCCCATA AACTTTGTTATCAATTCAAACAATGCCGGCAAAACGCCTCTTCACAAATAAAAAAAATTCAAAAACAGAGTGGCGAATAT CTCACTGAAGAGCTAAAAATCGCTCCGGGGCCGCTGGAGGTTGCCTATTTTTGTGAACAGGTAAATGATATCAAGAAGCA GACAGATACCTTAGAAAAACGTCTTCAGCTATGCTTTGCCAGCAGCAACAAGTTAACGCGGAATATCCGATGA
Upstream 100 bases:
>100_bases ACCGTGGTTACAAATATTAACCAATATGCACTTCTAGAGCTTCGGTACTAGGCTATCCCAGCTCCTACTTGCTAACATCA ACGCTAAAATAGAGGATATT
Downstream 100 bases:
>100_bases TAAAAATAAAAGAACTCACCCGCCTTTATCAAATCAATAAAACAGTAATTGAATATGGTTTAATAGAACTGCTCCCTAAA GAGCATGTGCCATTAGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MPLDKLVCGFLETTVNKLQQLDSSALQRRKQLNGTIIGVALKEINKPLYFVISTQQIDILSHYEGQADCFIRLNISALKE LQNNHQLTHLIKTEQLEVEGDIKIVQRFARLLTEMDIDWEEHLSAIIGDILAHKLCYQFKQCRQNASSQIKKIQKQSGEY LTEELKIAPGPLEVAYFCEQVNDIKKQTDTLEKRLQLCFASSNKLTRNIR
Sequences:
>Translated_210_residues MPLDKLVCGFLETTVNKLQQLDSSALQRRKQLNGTIIGVALKEINKPLYFVISTQQIDILSHYEGQADCFIRLNISALKE LQNNHQLTHLIKTEQLEVEGDIKIVQRFARLLTEMDIDWEEHLSAIIGDILAHKLCYQFKQCRQNASSQIKKIQKQSGEY LTEELKIAPGPLEVAYFCEQVNDIKKQTDTLEKRLQLCFASSNKLTRNIR >Mature_209_residues PLDKLVCGFLETTVNKLQQLDSSALQRRKQLNGTIIGVALKEINKPLYFVISTQQIDILSHYEGQADCFIRLNISALKEL QNNHQLTHLIKTEQLEVEGDIKIVQRFARLLTEMDIDWEEHLSAIIGDILAHKLCYQFKQCRQNASSQIKKIQKQSGEYL TEELKIAPGPLEVAYFCEQVNDIKKQTDTLEKRLQLCFASSNKLTRNIR
Specific function: Unknown
COG id: COG3165
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367308, Length=196, Percent_Identity=34.6938775510204, Blast_Score=129, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003033 [H]
Pfam domain/function: PF02036 SCP2 [H]
EC number: NA
Molecular weight: Translated: 24172; Mature: 24041
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDKLVCGFLETTVNKLQQLDSSALQRRKQLNGTIIGVALKEINKPLYFVISTQQIDIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHH SHYEGQADCFIRLNISALKELQNNHQLTHLIKTEQLEVEGDIKIVQRFARLLTEMDIDWE HHCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHH EHLSAIIGDILAHKLCYQFKQCRQNASSQIKKIQKQSGEYLTEELKIAPGPLEVAYFCEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VNDIKKQTDTLEKRLQLCFASSNKLTRNIR HHHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure PLDKLVCGFLETTVNKLQQLDSSALQRRKQLNGTIIGVALKEINKPLYFVISTQQIDIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHH SHYEGQADCFIRLNISALKELQNNHQLTHLIKTEQLEVEGDIKIVQRFARLLTEMDIDWE HHCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHH EHLSAIIGDILAHKLCYQFKQCRQNASSQIKKIQKQSGEYLTEELKIAPGPLEVAYFCEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VNDIKKQTDTLEKRLQLCFASSNKLTRNIR HHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]