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The map label for this gene is rpfG [H]

Identifier: 119944091

GI number: 119944091

Start: 404048

End: 405133

Strand: Reverse

Name: rpfG [H]

Synonym: Ping_0306

Alternate gene names: 119944091

Gene position: 405133-404048 (Counterclockwise)

Preceding gene: 119944092

Following gene: 119944087

Centisome position: 8.89

GC content: 40.79

Gene sequence:

>1086_bases
ATGTTAATTAATATAAGTAAAAAAGAAAGTAATCTGCGCGTATTATTAGGCGTTTTATCGATCGCGGCCGGGTCGCATGT
TTTATGGTTTATATTGCTGCCATTAGGAATCATGTTAATCCATTCGGGGTTAACCTCAAAGTGCCCGATCAGCCACCTTT
TAGGCAGACAAACAGAAGCCGCTAAAAAGCATTTTTTTATTAACTATTTGCCTAAATATAACCCGCAGCCTGTTTTTATA
TTCAAGGCCGATAATCAGCTCGCTTTTGCAAACGACCCTGCTAAAAAGTTTTTTCCCGATGTGCATAGATATCAAGATTT
AATTAATACAAGCATTGACCAAGTTATTCAAAAAGAGCAGATTAATCACAACACCCTTACCCTTCCGGATAAAAAAGTTT
ATTCGTTGATCACGCGCGGATCGACTGAACTCAATGGTGTTGTTGTCTATGGAAATGATATCTCTGAAATTATGACCCTT
AATCAAGAGATACTCGACACCCAAAAAGAGATTGTTTACGCAATGGGAGAAATTGGCGAAACGCGATCTAAAGAAACAGG
CGATCATGTGCGCCGCGTGGCTAAATATTCACAATTGTTAGCCTCCCTTGCCGGCATCGACAAAACAGAAGCAGATCTTA
TTAAATTCGCTTCACCAATGCATGATATTGGTAAAATTGGGATCCCGGATGCCATCCTGAATAAACCGGGGAAATTAGAT
AAAGATGAATTTGAGATAATGAAAACACATGCCGAGATAGGTTTTAACTTACTTAATCACTCCACACGACCTGTCCTTAA
AGCCGCTTCATTAATCGCCTATCATCACCATGAAAAATGGAATGGTTCGGGTTACCCGCAGCAACTGAGCGGCGAAGACA
TCCATATTTACGGGCGCATTACGGCTGTAGCGGATGTGTTTGACGCATTAGGCAGTGCAAGGGTGTATAAAAAAGCATGG
CCATTAGAAGAGATACTGGCATTACTTAAAGAGCAACGCGGTATACACTTTGACCCGTCACTGGTGGATTTGCTGTTAGA
AAACTTGCCAATGTTTCTGGAAATACGTGAAAAGCATCCCAATTAG

Upstream 100 bases:

>100_bases
TTATCACTTTGCTGATTCCTGCATATTCAAGTGATCTTAGGTATATATCTGCTTTAAAATCATTTACATTAAACTACCAG
AAAAATTATCTGAGGCTCTG

Downstream 100 bases:

>100_bases
CCGGCGCTTGGCAAAACCACCGGGACCATTAGAAAATATAAAGCCATCAGTCATTTTCCATAATCTAGACAATATGCCCT
GTTGCTGGTAAATAACCAAT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MLINISKKESNLRVLLGVLSIAAGSHVLWFILLPLGIMLIHSGLTSKCPISHLLGRQTEAAKKHFFINYLPKYNPQPVFI
FKADNQLAFANDPAKKFFPDVHRYQDLINTSIDQVIQKEQINHNTLTLPDKKVYSLITRGSTELNGVVVYGNDISEIMTL
NQEILDTQKEIVYAMGEIGETRSKETGDHVRRVAKYSQLLASLAGIDKTEADLIKFASPMHDIGKIGIPDAILNKPGKLD
KDEFEIMKTHAEIGFNLLNHSTRPVLKAASLIAYHHHEKWNGSGYPQQLSGEDIHIYGRITAVADVFDALGSARVYKKAW
PLEEILALLKEQRGIHFDPSLVDLLLENLPMFLEIREKHPN

Sequences:

>Translated_361_residues
MLINISKKESNLRVLLGVLSIAAGSHVLWFILLPLGIMLIHSGLTSKCPISHLLGRQTEAAKKHFFINYLPKYNPQPVFI
FKADNQLAFANDPAKKFFPDVHRYQDLINTSIDQVIQKEQINHNTLTLPDKKVYSLITRGSTELNGVVVYGNDISEIMTL
NQEILDTQKEIVYAMGEIGETRSKETGDHVRRVAKYSQLLASLAGIDKTEADLIKFASPMHDIGKIGIPDAILNKPGKLD
KDEFEIMKTHAEIGFNLLNHSTRPVLKAASLIAYHHHEKWNGSGYPQQLSGEDIHIYGRITAVADVFDALGSARVYKKAW
PLEEILALLKEQRGIHFDPSLVDLLLENLPMFLEIREKHPN
>Mature_361_residues
MLINISKKESNLRVLLGVLSIAAGSHVLWFILLPLGIMLIHSGLTSKCPISHLLGRQTEAAKKHFFINYLPKYNPQPVFI
FKADNQLAFANDPAKKFFPDVHRYQDLINTSIDQVIQKEQINHNTLTLPDKKVYSLITRGSTELNGVVVYGNDISEIMTL
NQEILDTQKEIVYAMGEIGETRSKETGDHVRRVAKYSQLLASLAGIDKTEADLIKFASPMHDIGKIGIPDAILNKPGKLD
KDEFEIMKTHAEIGFNLLNHSTRPVLKAASLIAYHHHEKWNGSGYPQQLSGEDIHIYGRITAVADVFDALGSARVYKKAW
PLEEILALLKEQRGIHFDPSLVDLLLENLPMFLEIREKHPN

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 40612; Mature: 40612

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINISKKESNLRVLLGVLSIAAGSHVLWFILLPLGIMLIHSGLTSKCPISHLLGRQTEA
CEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH
AKKHFFINYLPKYNPQPVFIFKADNQLAFANDPAKKFFPDVHRYQDLINTSIDQVIQKEQ
HHHHEEEEECCCCCCCEEEEEECCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
INHNTLTLPDKKVYSLITRGSTELNGVVVYGNDISEIMTLNQEILDTQKEIVYAMGEIGE
CCCCEEECCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TRSKETGDHVRRVAKYSQLLASLAGIDKTEADLIKFASPMHDIGKIGIPDAILNKPGKLD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCHHHHCCCCCCC
KDEFEIMKTHAEIGFNLLNHSTRPVLKAASLIAYHHHEKWNGSGYPQQLSGEDIHIYGRI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHH
TAVADVFDALGSARVYKKAWPLEEILALLKEQRGIHFDPSLVDLLLENLPMFLEIREKHP
HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHCCCC
N
C
>Mature Secondary Structure
MLINISKKESNLRVLLGVLSIAAGSHVLWFILLPLGIMLIHSGLTSKCPISHLLGRQTEA
CEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH
AKKHFFINYLPKYNPQPVFIFKADNQLAFANDPAKKFFPDVHRYQDLINTSIDQVIQKEQ
HHHHEEEEECCCCCCCEEEEEECCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
INHNTLTLPDKKVYSLITRGSTELNGVVVYGNDISEIMTLNQEILDTQKEIVYAMGEIGE
CCCCEEECCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TRSKETGDHVRRVAKYSQLLASLAGIDKTEADLIKFASPMHDIGKIGIPDAILNKPGKLD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCHHHHCCCCCCC
KDEFEIMKTHAEIGFNLLNHSTRPVLKAASLIAYHHHEKWNGSGYPQQLSGEDIHIYGRI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHH
TAVADVFDALGSARVYKKAWPLEEILALLKEQRGIHFDPSLVDLLLENLPMFLEIREKHP
HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]