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The map label for this gene is yliI [C]

Identifier: 119944092

GI number: 119944092

Start: 405342

End: 406508

Strand: Reverse

Name: yliI [C]

Synonym: Ping_0307

Alternate gene names: 119944092

Gene position: 406508-405342 (Counterclockwise)

Preceding gene: 119944093

Following gene: 119944091

Centisome position: 8.92

GC content: 45.59

Gene sequence:

>1167_bases
ATGGATATTATTATGCACTTACTATTTAAATCCAAGTTACTTTTAACAAGCGACTTTCTTCTCTTATTGTCTCTTCTTTC
CTGTAATGCCTTTGCCGAGCCTGCTGCTCAAAAGATTGAAGGTAATGCAGGCTCAATACTTCTGGCCGAAAGTTTTGCAA
CATTCAATGAACCCTGGGCTATGACATTTCTACCCAGCGGTGAGCTCCTGATAACTGAAAAAAAAGGTACTTTGCTTCTG
GTTGACCCGAATGACAGTTCTAAGATAGTTGTTAAGGGCGTACCCAAGGTAGCCTATGGTGGTCAGGGTGGTTTAGGTGA
TATCATTCTCCATCCTCAGTACAAAGAAAACCACTGGATATACTTGTCCTATGCCGAAAAAGACAGGTCAGGAAACACCG
GAGCCGTCGTTGCCCGAGCTAAACTTATTCATGCATCGGCAAAGCCTCAACTGGAAAACCTTGAAGTCATCTGGCGGCAA
ATACCTAAAGTATCAGGCAGCGGACATTATTCACACCGATTGGCATTTAGCCCCAATGGAAAGCTGTTTATTACTTCCGG
CGAACGGCAAAAACAGGCACCAGCACAGAGCTGGATGCAAAATCTGGGCAAGGTCATCAGACTAAACGCGGACGGTTCAG
TCCCATCAGACAATCCATTTCAGGATAAAGGAGAACTTGCAAAAACCTTCTGGTCTCTCGGGCATCGCAATTTACTCGGT
ATGGCCTTTGATAAAAAGGGCCAACTGTGGACACACGAAATGGGCCCGAGGCACGGTGACGAATTCAACCTGACCATTGG
TGGTGATAATTATGGTTGGCCCATTGTGTCCTGGGGTGATCAATATTCTGGTATTCCCATTCCCGATCATGATTCGCGTC
CTGAGTTCAATCCACCTGAAGTATATTGGGTACCAACGGTTGCACCATCAGGTCTGATTATATATTCCGGTGTTATGTTC
CCGAAATGGCAGGGTAATGCTTTTATCGGTGGGCTCAAGTCAAAATCACTGCTGCGTATTAAAATTGAAGGCTTTCAAGC
CGAGGAAGTCGAACGTTTCACAATGGAAAAACGGATACGAGAGGTTGAGCAAGGACCAAACGGAGCAATATGGGTTCTTG
AGGATCAAAAAGGGGGTCGTCTTCTGCGGCTCAGTGCATATGAATGA

Upstream 100 bases:

>100_bases
ATCTTGACTGCGCTTTTATTCTTCTTATACTCAAGCCGGTGCAGAGGGCTTTAAATGCATATATTTCTCAAATCGAATGC
GTGTCACCTAACAGTATAAA

Downstream 100 bases:

>100_bases
GCGATTATTAGCTAAGGGAAAAAATCCCGAGAAATTTATATAAGAGTACTTAAAATACTTGGCTTTAAAATGACCAGATG
ATCAGCCTTTTACCTGCAAT

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MDIIMHLLFKSKLLLTSDFLLLLSLLSCNAFAEPAAQKIEGNAGSILLAESFATFNEPWAMTFLPSGELLITEKKGTLLL
VDPNDSSKIVVKGVPKVAYGGQGGLGDIILHPQYKENHWIYLSYAEKDRSGNTGAVVARAKLIHASAKPQLENLEVIWRQ
IPKVSGSGHYSHRLAFSPNGKLFITSGERQKQAPAQSWMQNLGKVIRLNADGSVPSDNPFQDKGELAKTFWSLGHRNLLG
MAFDKKGQLWTHEMGPRHGDEFNLTIGGDNYGWPIVSWGDQYSGIPIPDHDSRPEFNPPEVYWVPTVAPSGLIIYSGVMF
PKWQGNAFIGGLKSKSLLRIKIEGFQAEEVERFTMEKRIREVEQGPNGAIWVLEDQKGGRLLRLSAYE

Sequences:

>Translated_388_residues
MDIIMHLLFKSKLLLTSDFLLLLSLLSCNAFAEPAAQKIEGNAGSILLAESFATFNEPWAMTFLPSGELLITEKKGTLLL
VDPNDSSKIVVKGVPKVAYGGQGGLGDIILHPQYKENHWIYLSYAEKDRSGNTGAVVARAKLIHASAKPQLENLEVIWRQ
IPKVSGSGHYSHRLAFSPNGKLFITSGERQKQAPAQSWMQNLGKVIRLNADGSVPSDNPFQDKGELAKTFWSLGHRNLLG
MAFDKKGQLWTHEMGPRHGDEFNLTIGGDNYGWPIVSWGDQYSGIPIPDHDSRPEFNPPEVYWVPTVAPSGLIIYSGVMF
PKWQGNAFIGGLKSKSLLRIKIEGFQAEEVERFTMEKRIREVEQGPNGAIWVLEDQKGGRLLRLSAYE
>Mature_388_residues
MDIIMHLLFKSKLLLTSDFLLLLSLLSCNAFAEPAAQKIEGNAGSILLAESFATFNEPWAMTFLPSGELLITEKKGTLLL
VDPNDSSKIVVKGVPKVAYGGQGGLGDIILHPQYKENHWIYLSYAEKDRSGNTGAVVARAKLIHASAKPQLENLEVIWRQ
IPKVSGSGHYSHRLAFSPNGKLFITSGERQKQAPAQSWMQNLGKVIRLNADGSVPSDNPFQDKGELAKTFWSLGHRNLLG
MAFDKKGQLWTHEMGPRHGDEFNLTIGGDNYGWPIVSWGDQYSGIPIPDHDSRPEFNPPEVYWVPTVAPSGLIIYSGVMF
PKWQGNAFIGGLKSKSLLRIKIEGFQAEEVERFTMEKRIREVEQGPNGAIWVLEDQKGGRLLRLSAYE

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=373, Percent_Identity=36.1930294906166, Blast_Score=224, Evalue=7e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 43083; Mature: 43083

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIMHLLFKSKLLLTSDFLLLLSLLSCNAFAEPAAQKIEGNAGSILLAESFATFNEPWA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCEE
MTFLPSGELLITEKKGTLLLVDPNDSSKIVVKGVPKVAYGGQGGLGDIILHPQYKENHWI
EEEECCCCEEEEECCCEEEEECCCCCCEEEEECCCCEEECCCCCCCCEEECCCCCCCCEE
YLSYAEKDRSGNTGAVVARAKLIHASAKPQLENLEVIWRQIPKVSGSGHYSHRLAFSPNG
EEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
KLFITSGERQKQAPAQSWMQNLGKVIRLNADGSVPSDNPFQDKGELAKTFWSLGHRNLLG
CEEEECCCHHHCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEE
MAFDKKGQLWTHEMGPRHGDEFNLTIGGDNYGWPIVSWGDQYSGIPIPDHDSRPEFNPPE
EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCE
VYWVPTVAPSGLIIYSGVMFPKWQGNAFIGGLKSKSLLRIKIEGFQAEEVERFTMEKRIR
EEEEECCCCCCEEEEECEECCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHH
EVEQGPNGAIWVLEDQKGGRLLRLSAYE
HHHCCCCCEEEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MDIIMHLLFKSKLLLTSDFLLLLSLLSCNAFAEPAAQKIEGNAGSILLAESFATFNEPWA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCEE
MTFLPSGELLITEKKGTLLLVDPNDSSKIVVKGVPKVAYGGQGGLGDIILHPQYKENHWI
EEEECCCCEEEEECCCEEEEECCCCCCEEEEECCCCEEECCCCCCCCEEECCCCCCCCEE
YLSYAEKDRSGNTGAVVARAKLIHASAKPQLENLEVIWRQIPKVSGSGHYSHRLAFSPNG
EEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
KLFITSGERQKQAPAQSWMQNLGKVIRLNADGSVPSDNPFQDKGELAKTFWSLGHRNLLG
CEEEECCCHHHCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEE
MAFDKKGQLWTHEMGPRHGDEFNLTIGGDNYGWPIVSWGDQYSGIPIPDHDSRPEFNPPE
EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCE
VYWVPTVAPSGLIIYSGVMFPKWQGNAFIGGLKSKSLLRIKIEGFQAEEVERFTMEKRIR
EEEEECCCCCCEEEEECEECCCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHH
EVEQGPNGAIWVLEDQKGGRLLRLSAYE
HHHCCCCCEEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]