| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944053
Identifier: 119944053
GI number: 119944053
Start: 349324
End: 350451
Strand: Direct
Name: 119944053
Synonym: Ping_0268
Alternate gene names: NA
Gene position: 349324-350451 (Clockwise)
Preceding gene: 119944051
Following gene: 119944055
Centisome position: 7.66
GC content: 41.58
Gene sequence:
>1128_bases ATGCGTATCACCGCTAATTTTGATTCAGGTAATATCGACGTTATTAATTTGAAGGATAAAAAAGATATCCAATTGTCTAT TCGTCCGGACTTCGGGGGCGAATTTTTTCAGTGGTTTAACTTTCGACTGGAAGGTGAGGTTGGTCAGCAATATATCCTTA ATATCCTTAATGCGGGTGAAGCCTCCTATCTTGAAGGATGGGAAAATTATCAAGCCGTGGCTTCTTATGATCGTAAGCAT TGGTTCCGACTGCCAACATTTTATAAAGAGGGGAAATTAACTATCGTGGCGGATCTGGATTGTGAAACAATCCAAATTGC CTACTTTGCGCCTTATAGTTATGAACGCCATCAAGACTTACTTGCGGCTGTGCAAACACATCCGCTGGTGAGTTTAGAGC ACTTAGGTGAAACCCTTGATCAACGTGATTTAACTTTGGTTAAAATTGGCGATGGTGATACTAATAAACGCAATATTTGG ATCACGGCTCGCCAGCATCCCGGTGAAACGATGGCTGAATGGTTAGTGGATGGATTAATGGATAGTTTACTTGATAGTAA TAATCCTACGGGAAAATTATTATTGGATAAAGCTAACTTTTATATTGTGCCTAATATGAATCCCGATGGCAGTGCGCGCG GACATCTTCGCACTAATGCGGCAGGCGTTAATTTGAACCGTGAATGGTTGAATCCAAGTTTAGAAAAAAGCCCTGAAGTT TTTCATGTGATCAATAAAATGGAAGAGACGGGTGTTGATTTATTTTATGATGTGCATGGCGATGAGGCATTACCCTTTGT TTTTCTGGCGGGTTCAGAAGGTACGCCGAGTTATAACAATCGACTTGCGGGTTTACGTAAGCGCTTTTCAGAAGTACTTA TGTTAGCGAGTGCAGACTTTCAGTCTGAATTTGGTTATGACGTTGATGCGCCCGGTGAAGCGAATATGACTCTGGCAACA AATTGGGTTGCGGAACGATTTGATTGTCTTGCTAATACATTAGAGATGCCATTTAAAGACAACGATAATTTACCCGATCC TATGATGGGATGGTCACCGGAACGCTCGCTTAAGTTAGGTGAAGCATCATTAGTTGCTATGCTCGCTGTGGTTGATGATT TACGTTAG
Upstream 100 bases:
>100_bases TTTCTTTAATCAAGTTAGTTTTCCTATCCTGTTTGTTTACAATCCTTTATGCTCGACTTACTTTGTAAAAAATAAATAAC TAATTAAAAAAGGAAATGCT
Downstream 100 bases:
>100_bases TTTATAAAGCACTTAACCTTTAAAGAAAAACATTTAAATAAATGCCAATCAAAAAGCCTGACTTGTCAGGCTTTTTGATT TTGGCGCTATTTAAACTGTT
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGEASYLEGWENYQAVASYDRKH WFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDLLAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIW ITARQHPGETMAEWLVDGLMDSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADFQSEFGYDVDAPGEANMTLAT NWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLGEASLVAMLAVVDDLR
Sequences:
>Translated_375_residues MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGEASYLEGWENYQAVASYDRKH WFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDLLAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIW ITARQHPGETMAEWLVDGLMDSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADFQSEFGYDVDAPGEANMTLAT NWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLGEASLVAMLAVVDDLR >Mature_375_residues MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGEASYLEGWENYQAVASYDRKH WFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDLLAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIW ITARQHPGETMAEWLVDGLMDSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADFQSEFGYDVDAPGEANMTLAT NWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLGEASLVAMLAVVDDLR
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190194403, Length=295, Percent_Identity=30.5084745762712, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI222352158, Length=312, Percent_Identity=27.8846153846154, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI31657119, Length=329, Percent_Identity=27.6595744680851, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI170763513, Length=322, Percent_Identity=26.3975155279503, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI120444924, Length=322, Percent_Identity=26.3975155279503, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI78482633, Length=291, Percent_Identity=27.1477663230241, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI118421091, Length=292, Percent_Identity=27.0547945205479, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115533904, Length=399, Percent_Identity=25.8145363408521, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI193202888, Length=374, Percent_Identity=22.4598930481283, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24641847, Length=313, Percent_Identity=26.8370607028754, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI28571179, Length=313, Percent_Identity=26.8370607028754, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI161077807, Length=313, Percent_Identity=26.8370607028754, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24641845, Length=313, Percent_Identity=26.8370607028754, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24651466, Length=274, Percent_Identity=27.7372262773723, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 42385; Mature: 42385
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGE CEEEEECCCCCEEEEEECCCCCEEEEECCCCCHHHHHHCCEEEECCCCHHHHHHHHCCCC ASYLEGWENYQAVASYDRKHWFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDL HHHHHCHHHHHHHHHHCHHHEEECCCEECCCCEEEEEECCCCEEEEEEECCCCCHHHHHH LAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIWITARQHPGETMAEWLVDGLM HHHHHHCCCEEHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH DSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV HHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCHH FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADF HHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC QSEFGYDVDAPGEANMTLATNWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLG HHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC EASLVAMLAVVDDLR HHHHHHHHHHHHCCC >Mature Secondary Structure MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGE CEEEEECCCCCEEEEEECCCCCEEEEECCCCCHHHHHHCCEEEECCCCHHHHHHHHCCCC ASYLEGWENYQAVASYDRKHWFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDL HHHHHCHHHHHHHHHHCHHHEEECCCEECCCCEEEEEECCCCEEEEEEECCCCCHHHHHH LAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIWITARQHPGETMAEWLVDGLM HHHHHHCCCEEHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH DSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV HHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCHH FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADF HHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC QSEFGYDVDAPGEANMTLATNWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLG HHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC EASLVAMLAVVDDLR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]