| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944048
Identifier: 119944048
GI number: 119944048
Start: 343179
End: 343451
Strand: Direct
Name: 119944048
Synonym: Ping_0262
Alternate gene names: NA
Gene position: 343179-343451 (Clockwise)
Preceding gene: 119944047
Following gene: 119944049
Centisome position: 7.53
GC content: 34.43
Gene sequence:
>273_bases ATGACAGTGAGTTTTGAAGACAAAAGTAAAGCAGATCAATATTGGCAGGAGAATATTAATTTAGTCATCAGACTATTAAT TATTTGGGCCGTCGTTTCCTTTGGCTTTGGTATTTTGCTCGTAGATGTACTAAATGAAGTCACCTTTATGGGATTCAAAT TAGGTTTCTGGTTTGCACAACAGGGCGCGATATATGTGTTTCTTTTCTTGATTTTTTATTATAGAGCAAAAGCAAACAAA CTCGATGAAAAATACGGTGTTCAAGAAGACTAA
Upstream 100 bases:
>100_bases TAAAAGTGAATGCTTATTCTTTGTTTAATGAATGTTTAAATTAAATACCAAAAGTAAGTGTTTACTTTAAATCTCTTCCT CATTAAGACCATTAAGGAGA
Downstream 100 bases:
>100_bases GGATTAGCATAATGGATGTTCAAACTTTAACTTATACAATTGTAGGCATGACGTTTGCCCTTTATATTGTTATTGCAATA TGGAGCCGAGCAGGCTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTVSFEDKSKADQYWQENINLVIRLLIIWAVVSFGFGILLVDVLNEVTFMGFKLGFWFAQQGAIYVFLFLIFYYRAKANK LDEKYGVQED
Sequences:
>Translated_90_residues MTVSFEDKSKADQYWQENINLVIRLLIIWAVVSFGFGILLVDVLNEVTFMGFKLGFWFAQQGAIYVFLFLIFYYRAKANK LDEKYGVQED >Mature_89_residues TVSFEDKSKADQYWQENINLVIRLLIIWAVVSFGFGILLVDVLNEVTFMGFKLGFWFAQQGAIYVFLFLIFYYRAKANKL DEKYGVQED
Specific function: Unknown
COG id: COG4327
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10574; Mature: 10443
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSFEDKSKADQYWQENINLVIRLLIIWAVVSFGFGILLVDVLNEVTFMGFKLGFWFAQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGAIYVFLFLIFYYRAKANKLDEKYGVQED CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TVSFEDKSKADQYWQENINLVIRLLIIWAVVSFGFGILLVDVLNEVTFMGFKLGFWFAQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGAIYVFLFLIFYYRAKANKLDEKYGVQED CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA