| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is argHA [H]
Identifier: 119944018
GI number: 119944018
Start: 293604
End: 295484
Strand: Direct
Name: argHA [H]
Synonym: Ping_0232
Alternate gene names: 119944018
Gene position: 293604-295484 (Clockwise)
Preceding gene: 119944017
Following gene: 119944020
Centisome position: 6.44
GC content: 43.49
Gene sequence:
>1881_bases ATGGCATTATGGGGCGGACGTTTTAGCCACGCGGCAGACGTAAAATTTAAATTGTTTAATGATTCATTAAGATTCGATTA TCGTCTTGCGGAACAAGACATTATTGGTTCAATAGCTTGGTCAAAAGCGTTACAAACAGTTGATGTATTAACCAATGATG AACAAAAACGCTTAGAAGCTGCGTTAAATGAATTATTAGTATCAGTTAAAGATAATCCTGAGCTGGTATTACAATCCGAT GCCGAAGATATCCATTCTTGGACAGAAGGACAACTGATTAATAAAATCGGTGACTTAGGTAAAAAATTACATACGGGTCG TAGTCGTAATGATCAGGTTGCAACGGATTTAAAGCTTTGGTGTAAAAAAAGAGCACAGGAATTAGTTGTCCATCTGGATG CATTGGAAGCCAAGCTCATCGAACTGGCACGTATTCACCAGGGGGTTGTTCTACCGGGTTATACACATTTACAACGCGCA CAACCGGTGACATTTTCGCACTGGTGTTTAGCCTATTTAGAAATGTTAGAGCGTGACCATGATCGTTTGGAAGGCTGCCT TGAACGCCTTGATACTTGTCCTTTGGGCAGTGGCGCATTGGCAGGAACAGGCTATGCAATAGATCGCACCGCATTAGCAC ACTCTCTTGGATTTAAACGTGCGACGCGCAACAGCTTAGATGCTGTTTCCGACCGCGACCATGTTGTTGAGTTGATGAGC TGTGCAACGATGTCCATGATGCATATGTCGCGCATGGCAGAAGATCTGATCTTCTATAACAGTGGTGAGTCAGGATTTAT TGAGATGTCTGATTTAGTGACGTCCGGATCATCATTAATGCCGCAAAAGAAAAATCCTGATGCAATGGAATTGATTCGTG GCAGAACCGGCCGTGTATTTGGCTCATTAGCGGCTATGTTAATGACGCTTAAAGGTCTGCCGCTTGCTTATAACAAAGAT ATGCAGGAAGACAAAGAAGGTTTATTCGACTCTCTGGACACTTGGGGAGACTGTTTAGAAATGGCAGCAATGGCCTTAAC CGATCTTAAAGTGAACGAAGAACGCACCAAAGAAGCAGCCCAGGGCGGGTATTCAAACGCCACTGAACTTGCTGATTACC TGGTTGCTAAAGGCATTCCATTCCGTGAAGCACACCATATTGTAGGTGTTGCCGTTGTCGGGGCGATTGAGAAGGGCATA CCACTGGAAGATTTAACGGTCACCCAATTTAAAGAGTTTTCTTCTGTGATTGAAGATGACGTTTATCCGGTATTGACGCT CGAAGCAACACTTGCCGCACGTAAAGCACTCGGTGGTGTTTCACCTGAGCAGATTGAATATGCACTAACGGAAGCAGAAC AACGCTTAGCAGATCGTGATACATCGGGCATTGTGATAAGAGCGGCTCGTTTAACAGACATCGATCGTATTGAAGCAATG GTTAACCACTTGGCTGATACAGGCGAAAACCTTCGAAGAGATAAGACCGACTTAGCGGAGTCAGTGGCTGAATTTGCAGT AGCTGAAATAGATGGCAAAGTCACGGCCTGTGCTTCAGTGCATATCTATGATACCGGTTTAGCCGAAATTCGCTCATTAG GTGTAGAGCCTGGTTTTGAACGCCGTGGTCAAGGTAGCGCATTAGTGGATTTCTTAGTTAAACGTACAGAAAAACAAGCG ATCAAGCGTCTATTCGTATTAACACGCATGCCAGACTTCTTTATGAAGCTTGGTTTTAGTCCCGAAAGTAAGACTACGAT GCCGGAAAAAGTCTTAAAAGATTGTTCAATGTTTGTGAGTGAACATGCAAGTGATGAAAAGGCACTAGAGTTGAATTACA AAACAAGTATGTTGCTCCATAAAGGAATGAGCAAAATTTAA
Upstream 100 bases:
>100_bases AGGGCGGGAATTTCTATTTTTATCTGTTTTTTTTTAAAGTATATAAAAATAGATTCTAAAAAATAGCTACAACAAACCAA GAAAGTGATGGAGCATCAAA
Downstream 100 bases:
>100_bases AATAACCTATCTATTTGTTCCCACGTTTCTGCGTGGGAACAAATAATGTTAACCCTGAGCAATATACTCATTTTTTAGTG TGACATAATGCGCTGCAGAA
Product: bifunctional argininosuccinate lyase/N-acetylglutamate synthase
Products: NA
Alternate protein names: Argininosuccinate lyase; ASAL; Arginosuccinase; Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS; NAGS [H]
Number of amino acids: Translated: 626; Mature: 625
Protein sequence:
>626_residues MALWGGRFSHAADVKFKLFNDSLRFDYRLAEQDIIGSIAWSKALQTVDVLTNDEQKRLEAALNELLVSVKDNPELVLQSD AEDIHSWTEGQLINKIGDLGKKLHTGRSRNDQVATDLKLWCKKRAQELVVHLDALEAKLIELARIHQGVVLPGYTHLQRA QPVTFSHWCLAYLEMLERDHDRLEGCLERLDTCPLGSGALAGTGYAIDRTALAHSLGFKRATRNSLDAVSDRDHVVELMS CATMSMMHMSRMAEDLIFYNSGESGFIEMSDLVTSGSSLMPQKKNPDAMELIRGRTGRVFGSLAAMLMTLKGLPLAYNKD MQEDKEGLFDSLDTWGDCLEMAAMALTDLKVNEERTKEAAQGGYSNATELADYLVAKGIPFREAHHIVGVAVVGAIEKGI PLEDLTVTQFKEFSSVIEDDVYPVLTLEATLAARKALGGVSPEQIEYALTEAEQRLADRDTSGIVIRAARLTDIDRIEAM VNHLADTGENLRRDKTDLAESVAEFAVAEIDGKVTACASVHIYDTGLAEIRSLGVEPGFERRGQGSALVDFLVKRTEKQA IKRLFVLTRMPDFFMKLGFSPESKTTMPEKVLKDCSMFVSEHASDEKALELNYKTSMLLHKGMSKI
Sequences:
>Translated_626_residues MALWGGRFSHAADVKFKLFNDSLRFDYRLAEQDIIGSIAWSKALQTVDVLTNDEQKRLEAALNELLVSVKDNPELVLQSD AEDIHSWTEGQLINKIGDLGKKLHTGRSRNDQVATDLKLWCKKRAQELVVHLDALEAKLIELARIHQGVVLPGYTHLQRA QPVTFSHWCLAYLEMLERDHDRLEGCLERLDTCPLGSGALAGTGYAIDRTALAHSLGFKRATRNSLDAVSDRDHVVELMS CATMSMMHMSRMAEDLIFYNSGESGFIEMSDLVTSGSSLMPQKKNPDAMELIRGRTGRVFGSLAAMLMTLKGLPLAYNKD MQEDKEGLFDSLDTWGDCLEMAAMALTDLKVNEERTKEAAQGGYSNATELADYLVAKGIPFREAHHIVGVAVVGAIEKGI PLEDLTVTQFKEFSSVIEDDVYPVLTLEATLAARKALGGVSPEQIEYALTEAEQRLADRDTSGIVIRAARLTDIDRIEAM VNHLADTGENLRRDKTDLAESVAEFAVAEIDGKVTACASVHIYDTGLAEIRSLGVEPGFERRGQGSALVDFLVKRTEKQA IKRLFVLTRMPDFFMKLGFSPESKTTMPEKVLKDCSMFVSEHASDEKALELNYKTSMLLHKGMSKI >Mature_625_residues ALWGGRFSHAADVKFKLFNDSLRFDYRLAEQDIIGSIAWSKALQTVDVLTNDEQKRLEAALNELLVSVKDNPELVLQSDA EDIHSWTEGQLINKIGDLGKKLHTGRSRNDQVATDLKLWCKKRAQELVVHLDALEAKLIELARIHQGVVLPGYTHLQRAQ PVTFSHWCLAYLEMLERDHDRLEGCLERLDTCPLGSGALAGTGYAIDRTALAHSLGFKRATRNSLDAVSDRDHVVELMSC ATMSMMHMSRMAEDLIFYNSGESGFIEMSDLVTSGSSLMPQKKNPDAMELIRGRTGRVFGSLAAMLMTLKGLPLAYNKDM QEDKEGLFDSLDTWGDCLEMAAMALTDLKVNEERTKEAAQGGYSNATELADYLVAKGIPFREAHHIVGVAVVGAIEKGIP LEDLTVTQFKEFSSVIEDDVYPVLTLEATLAARKALGGVSPEQIEYALTEAEQRLADRDTSGIVIRAARLTDIDRIEAMV NHLADTGENLRRDKTDLAESVAEFAVAEIDGKVTACASVHIYDTGLAEIRSLGVEPGFERRGQGSALVDFLVKRTEKQAI KRLFVLTRMPDFFMKLGFSPESKTTMPEKVLKDCSMFVSEHASDEKALELNYKTSMLLHKGMSKI
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=458, Percent_Identity=43.0131004366812, Blast_Score=358, Evalue=9e-99, Organism=Homo sapiens, GI68303542, Length=458, Percent_Identity=43.0131004366812, Blast_Score=358, Evalue=9e-99, Organism=Homo sapiens, GI68303549, Length=458, Percent_Identity=41.0480349344978, Blast_Score=328, Evalue=1e-89, Organism=Homo sapiens, GI68303547, Length=458, Percent_Identity=39.9563318777293, Blast_Score=318, Evalue=1e-86, Organism=Escherichia coli, GI1790398, Length=456, Percent_Identity=68.4210526315789, Blast_Score=660, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6321806, Length=446, Percent_Identity=45.5156950672646, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI221473854, Length=443, Percent_Identity=42.2121896162528, Blast_Score=351, Evalue=1e-96, Organism=Drosophila melanogaster, GI78706858, Length=443, Percent_Identity=42.2121896162528, Blast_Score=351, Evalue=1e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR009049 - InterPro: IPR011244 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00206 Lyase_1 [H]
EC number: =4.3.2.1; =2.3.1.1 [H]
Molecular weight: Translated: 69394; Mature: 69263
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALWGGRFSHAADVKFKLFNDSLRFDYRLAEQDIIGSIAWSKALQTVDVLTNDEQKRLEA CCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ALNELLVSVKDNPELVLQSDAEDIHSWTEGQLINKIGDLGKKLHTGRSRNDQVATDLKLW HHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH CKKRAQELVVHLDALEAKLIELARIHQGVVLPGYTHLQRAQPVTFSHWCLAYLEMLERDH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCH DRLEGCLERLDTCPLGSGALAGTGYAIDRTALAHSLGFKRATRNSLDAVSDRDHVVELMS HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHH CATMSMMHMSRMAEDLIFYNSGESGFIEMSDLVTSGSSLMPQKKNPDAMELIRGRTGRVF HHHHHHHHHHHHHHHHEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHH GSLAAMLMTLKGLPLAYNKDMQEDKEGLFDSLDTWGDCLEMAAMALTDLKVNEERTKEAA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QGGYSNATELADYLVAKGIPFREAHHIVGVAVVGAIEKGIPLEDLTVTQFKEFSSVIEDD CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC VYPVLTLEATLAARKALGGVSPEQIEYALTEAEQRLADRDTSGIVIRAARLTDIDRIEAM CCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHH VNHLADTGENLRRDKTDLAESVAEFAVAEIDGKVTACASVHIYDTGLAEIRSLGVEPGFE HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHCCCCCCCC RRGQGSALVDFLVKRTEKQAIKRLFVLTRMPDFFMKLGFSPESKTTMPEKVLKDCSMFVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH EHASDEKALELNYKTSMLLHKGMSKI HCCCCCCEEEECHHHHHHHHHHHCCC >Mature Secondary Structure ALWGGRFSHAADVKFKLFNDSLRFDYRLAEQDIIGSIAWSKALQTVDVLTNDEQKRLEA CCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ALNELLVSVKDNPELVLQSDAEDIHSWTEGQLINKIGDLGKKLHTGRSRNDQVATDLKLW HHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH CKKRAQELVVHLDALEAKLIELARIHQGVVLPGYTHLQRAQPVTFSHWCLAYLEMLERDH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCH DRLEGCLERLDTCPLGSGALAGTGYAIDRTALAHSLGFKRATRNSLDAVSDRDHVVELMS HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHH CATMSMMHMSRMAEDLIFYNSGESGFIEMSDLVTSGSSLMPQKKNPDAMELIRGRTGRVF HHHHHHHHHHHHHHHHEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHH GSLAAMLMTLKGLPLAYNKDMQEDKEGLFDSLDTWGDCLEMAAMALTDLKVNEERTKEAA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QGGYSNATELADYLVAKGIPFREAHHIVGVAVVGAIEKGIPLEDLTVTQFKEFSSVIEDD CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC VYPVLTLEATLAARKALGGVSPEQIEYALTEAEQRLADRDTSGIVIRAARLTDIDRIEAM CCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHH VNHLADTGENLRRDKTDLAESVAEFAVAEIDGKVTACASVHIYDTGLAEIRSLGVEPGFE HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHCCCCCCCC RRGQGSALVDFLVKRTEKQAIKRLFVLTRMPDFFMKLGFSPESKTTMPEKVLKDCSMFVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH EHASDEKALELNYKTSMLLHKGMSKI HCCCCCCEEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10692366 [H]