| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is argG
Identifier: 119944017
GI number: 119944017
Start: 292252
End: 293460
Strand: Direct
Name: argG
Synonym: Ping_0231
Alternate gene names: 119944017
Gene position: 292252-293460 (Clockwise)
Preceding gene: 119944016
Following gene: 119944018
Centisome position: 6.41
GC content: 44.67
Gene sequence:
>1209_bases ATGAGTAAAGTTAAAAAAGTGGTACTCGCATATTCAGGTGGCCTGGATACTTCGGCAATCATTCCATGGTTAAAAGAGAC CTATGATGATTGTGAAATCATCGCTTTTTGTGCCGATGTTGGTCAGGGCGCTGAAGAGTTAGTGGGATTAGAGGAAAAAG CATTAGCATCGGGCGCTTCTGAGTGCCATATTGTTGATCTGAAAGAAGAGTTTGTTAAGGATTATATCTATCCGACTATG GCATCGGGTGCTGTTTATGAGGGTACTTACCTGTTAGGCACCGCAATGGCGCGCCCAATTATTGCTAAAGCGCAGGTTGA AGTGGCACTTAAAGTCGGTGCTGACGCGTTATGTCATGGTTGTACCGGTAAAGGTAATGACCAAATCCGTTTTGAAAGCT GTTTTGCCGCATTGGCCCCTGAGTTGCAGGTGATTGCTCCTTGGCGTGAATGGGAAATGGAATCGCGTGAAGATTTACTT GATTACCTTGCCGAGCGTAATATCGAAACAACAGCAAGTGCGACTAAAATCTATAGTCGTGACGCCAATGCATGGCATAT TTCTCACGAAGGTGGTGAGCTGGAAAATCCATGGAATGCACCAAGCAAAGGCGTTTGGACATTAACCGTTGATCCTGAAG ACGCACCTGATAAACCTGAATACTTAACTATTAAAGTTGAAAATGCCCGTGTTGTTGCCGTTGACGGTGTTGAGCTTTCT CCCTATGACGCACTGATGCTGTTAAATGAAAAAGCGGCAGCGCATGGTGTAGGTCGTGTTGATATCACTGAGAACCGTAC TGTTGGTATGAAGTCTCGTGGTTGTTACGAAACGCCTGGAGGTACCGTGATGGTAGCTGCGCTGCGCGGTATCGATGAAC TCGTTCATGACAAACCAGCCCGCAAATGGCGCGACCAAGTGGGTCAGGAATTCACTCACTTAGTCTATGACGGGCGTTGG TTTACACCACTTTGCGGCTCTTTATTAGCCGCTTCTGAAGCATTGGCAAAAGATGTTAATGGTGAAGTCGTTGTTAAAAT GTATAAAGGTCAAGTGACGGCAGAGCAAAAACGCTCTCCAAACAGCTTATATTCTGAAGAGTTTGCGACATTTGGTGATG ATAACGTTTATAATCAAAAACATGCAGAAGGTTTTATCCGTTTATATTCACTTTCAAGCCGTATCCGTACCTTGAACAGT AAAAAATAA
Upstream 100 bases:
>100_bases TTCGTTAATTTTTGACCAGGCAGAAAATAGAATGCACATTCAAAACGCTATTATGCTTACCTTAATTAACAAATAAATGC AGACGAAAGGAAAATAATCA
Downstream 100 bases:
>100_bases GCATTAAATCTGACATATTACAATTCCCGTCCTGTATTTTCACAGGGCGGGAATTTCTATTTTTATCTGTTTTTTTTTAA AGTATATAAAAATAGATTCT
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSKVKKVVLAYSGGLDTSAIIPWLKETYDDCEIIAFCADVGQGAEELVGLEEKALASGASECHIVDLKEEFVKDYIYPTM ASGAVYEGTYLLGTAMARPIIAKAQVEVALKVGADALCHGCTGKGNDQIRFESCFAALAPELQVIAPWREWEMESREDLL DYLAERNIETTASATKIYSRDANAWHISHEGGELENPWNAPSKGVWTLTVDPEDAPDKPEYLTIKVENARVVAVDGVELS PYDALMLLNEKAAAHGVGRVDITENRTVGMKSRGCYETPGGTVMVAALRGIDELVHDKPARKWRDQVGQEFTHLVYDGRW FTPLCGSLLAASEALAKDVNGEVVVKMYKGQVTAEQKRSPNSLYSEEFATFGDDNVYNQKHAEGFIRLYSLSSRIRTLNS KK
Sequences:
>Translated_402_residues MSKVKKVVLAYSGGLDTSAIIPWLKETYDDCEIIAFCADVGQGAEELVGLEEKALASGASECHIVDLKEEFVKDYIYPTM ASGAVYEGTYLLGTAMARPIIAKAQVEVALKVGADALCHGCTGKGNDQIRFESCFAALAPELQVIAPWREWEMESREDLL DYLAERNIETTASATKIYSRDANAWHISHEGGELENPWNAPSKGVWTLTVDPEDAPDKPEYLTIKVENARVVAVDGVELS PYDALMLLNEKAAAHGVGRVDITENRTVGMKSRGCYETPGGTVMVAALRGIDELVHDKPARKWRDQVGQEFTHLVYDGRW FTPLCGSLLAASEALAKDVNGEVVVKMYKGQVTAEQKRSPNSLYSEEFATFGDDNVYNQKHAEGFIRLYSLSSRIRTLNS KK >Mature_401_residues SKVKKVVLAYSGGLDTSAIIPWLKETYDDCEIIAFCADVGQGAEELVGLEEKALASGASECHIVDLKEEFVKDYIYPTMA SGAVYEGTYLLGTAMARPIIAKAQVEVALKVGADALCHGCTGKGNDQIRFESCFAALAPELQVIAPWREWEMESREDLLD YLAERNIETTASATKIYSRDANAWHISHEGGELENPWNAPSKGVWTLTVDPEDAPDKPEYLTIKVENARVVAVDGVELSP YDALMLLNEKAAAHGVGRVDITENRTVGMKSRGCYETPGGTVMVAALRGIDELVHDKPARKWRDQVGQEFTHLVYDGRWF TPLCGSLLAASEALAKDVNGEVVVKMYKGQVTAEQKRSPNSLYSEEFATFGDDNVYNQKHAEGFIRLYSLSSRIRTLNSK K
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI53759107, Length=402, Percent_Identity=44.0298507462687, Blast_Score=301, Evalue=6e-82, Organism=Homo sapiens, GI16950633, Length=402, Percent_Identity=44.0298507462687, Blast_Score=301, Evalue=6e-82, Organism=Escherichia coli, GI1789563, Length=363, Percent_Identity=26.9972451790634, Blast_Score=124, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6324514, Length=366, Percent_Identity=44.8087431693989, Blast_Score=292, Evalue=7e-80, Organism=Drosophila melanogaster, GI21358151, Length=401, Percent_Identity=39.4014962593516, Blast_Score=280, Evalue=1e-75,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ASSY_PSYIN (A1SRI3)
Other databases:
- EMBL: CP000510 - RefSeq: YP_941697.1 - ProteinModelPortal: A1SRI3 - SMR: A1SRI3 - STRING: A1SRI3 - GeneID: 4625791 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0231 - eggNOG: COG0137 - HOGENOM: HBG335267 - OMA: VAVDVGQ - PhylomeDB: A1SRI3 - ProtClustDB: PRK00509 - BioCyc: PING357804:PING_0231-MONOMER - GO: GO:0005737 - HAMAP: MF_00005 - InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11587 - TIGRFAMs: TIGR00032
Pfam domain/function: PF00764 Arginosuc_synth
EC number: =6.3.4.5
Molecular weight: Translated: 44241; Mature: 44110
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1; PS00565 ARGININOSUCCIN_SYN_2
Important sites: BINDING 38-38 BINDING 90-90 BINDING 120-120 BINDING 122-122 BINDING 126-126 BINDING 126-126 BINDING 127-127 BINDING 130-130 BINDING 179-179 BINDING 188-188 BINDING 264-264 BINDING 276-276
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVKKVVLAYSGGLDTSAIIPWLKETYDDCEIIAFCADVGQGAEELVGLEEKALASGAS CCCHHEEEEEECCCCCHHHHHHHHHHCCCCHHEEEEEHHHCCCHHHHHCCHHHHHHCCCC ECHIVDLKEEFVKDYIYPTMASGAVYEGTYLLGTAMARPIIAKAQVEVALKVGADALCHG CEEEECHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCHHHHHHEEEEEECCCHHHHCC CTGKGNDQIRFESCFAALAPELQVIAPWREWEMESREDLLDYLAERNIETTASATKIYSR CCCCCCCCEEHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCC DANAWHISHEGGELENPWNAPSKGVWTLTVDPEDAPDKPEYLTIKVENARVVAVDGVELS CCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCEEC PYDALMLLNEKAAAHGVGRVDITENRTVGMKSRGCYETPGGTVMVAALRGIDELVHDKPA CCCEEEEECCHHHHCCCCEEEECCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHH RKWRDQVGQEFTHLVYDGRWFTPLCGSLLAASEALAKDVNGEVVVKMYKGQVTAEQKRSP HHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCC NSLYSEEFATFGDDNVYNQKHAEGFIRLYSLSSRIRTLNSKK CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKVKKVVLAYSGGLDTSAIIPWLKETYDDCEIIAFCADVGQGAEELVGLEEKALASGAS CCHHEEEEEECCCCCHHHHHHHHHHCCCCHHEEEEEHHHCCCHHHHHCCHHHHHHCCCC ECHIVDLKEEFVKDYIYPTMASGAVYEGTYLLGTAMARPIIAKAQVEVALKVGADALCHG CEEEECHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCHHHHHHEEEEEECCCHHHHCC CTGKGNDQIRFESCFAALAPELQVIAPWREWEMESREDLLDYLAERNIETTASATKIYSR CCCCCCCCEEHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCC DANAWHISHEGGELENPWNAPSKGVWTLTVDPEDAPDKPEYLTIKVENARVVAVDGVELS CCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCEEC PYDALMLLNEKAAAHGVGRVDITENRTVGMKSRGCYETPGGTVMVAALRGIDELVHDKPA CCCEEEEECCHHHHCCCCEEEECCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHH RKWRDQVGQEFTHLVYDGRWFTPLCGSLLAASEALAKDVNGEVVVKMYKGQVTAEQKRSP HHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCC NSLYSEEFATFGDDNVYNQKHAEGFIRLYSLSSRIRTLNSKK CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA