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The map label for this gene is cc4 [H]

Identifier: 119943996

GI number: 119943996

Start: 263126

End: 263728

Strand: Reverse

Name: cc4 [H]

Synonym: Ping_0210

Alternate gene names: 119943996

Gene position: 263728-263126 (Counterclockwise)

Preceding gene: 119943999

Following gene: 119943995

Centisome position: 5.78

GC content: 42.62

Gene sequence:

>603_bases
ATGAATAAATTATTAATAGCATTCGTTGCGGTACTGAGCTTCTCCAGCTTTGTACAAGCACAAGGAAATATTGAAGCAGG
TAAGGCAAAGTCTGCAACATGTGCCGCTTGCCATGGTGCTGATGGAAATAGCGCATCAAATCTATATCCCAAATTAGCGG
GGCAGCATGCACCTTATTTAGAAAAACAACTGCAACAGTTTAAAAATGGCGAAAGAGCAAATGCAATAATGATGGGCATG
GCCAGCGTGCTTTCAACGCAAGATATGCAAGACTTGGCAGCCTATTACGCAAGTAATACAATGACGCCTGAAATGGTTTC
ACCCGAGATAGTGACAGCGGGAGAAAAACTTTATATGGCTGGCAAAGCAGATCGGAAAATGGCTGCGTGCACTGCTTGTC
ACGGACCCCGTGGCAATGGTTTGGAGCTGGCTAATTTTCCTAAAATTTCCAGTCAACATCCCGCTTACATAAAAGCACAG
CTTGAAAAATTCCGCAGTAAAGAGCGTATGAATTCTCCAAACGGCATGATGAATGATGTAGCGGCTAAATTAAGTGACGC
TGATATCGAGTTACTTTCTAAGTACATTTCAGCATTACATTAA

Upstream 100 bases:

>100_bases
ACAATATTGACAGCTAAGGTTATCTCTAGGGTTGAGTGACGGATTCTGATTTGCAAATGGTTTTGGCCAATACATACTTT
TAATAAAAAAATGGACAGTT

Downstream 100 bases:

>100_bases
GCACAACATCTTAAATCGATAACGATACCCAATCTAGCTCAGGATGTTAATACATCTTGAGCTAGATTGGGTATGAAAGC
CTTTGTGTCTCTCTATAACC

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MNKLLIAFVAVLSFSSFVQAQGNIEAGKAKSATCAACHGADGNSASNLYPKLAGQHAPYLEKQLQQFKNGERANAIMMGM
ASVLSTQDMQDLAAYYASNTMTPEMVSPEIVTAGEKLYMAGKADRKMAACTACHGPRGNGLELANFPKISSQHPAYIKAQ
LEKFRSKERMNSPNGMMNDVAAKLSDADIELLSKYISALH

Sequences:

>Translated_200_residues
MNKLLIAFVAVLSFSSFVQAQGNIEAGKAKSATCAACHGADGNSASNLYPKLAGQHAPYLEKQLQQFKNGERANAIMMGM
ASVLSTQDMQDLAAYYASNTMTPEMVSPEIVTAGEKLYMAGKADRKMAACTACHGPRGNGLELANFPKISSQHPAYIKAQ
LEKFRSKERMNSPNGMMNDVAAKLSDADIELLSKYISALH
>Mature_200_residues
MNKLLIAFVAVLSFSSFVQAQGNIEAGKAKSATCAACHGADGNSASNLYPKLAGQHAPYLEKQLQQFKNGERANAIMMGM
ASVLSTQDMQDLAAYYASNTMTPEMVSPEIVTAGEKLYMAGKADRKMAACTACHGPRGNGLELANFPKISSQHPAYIKAQ
LEKFRSKERMNSPNGMMNDVAAKLSDADIELLSKYISALH

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21499; Mature: 21499

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLLIAFVAVLSFSSFVQAQGNIEAGKAKSATCAACHGADGNSASNLYPKLAGQHAPYL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHCCHHHCCCCCHHH
EKQLQQFKNGERANAIMMGMASVLSTQDMQDLAAYYASNTMTPEMVSPEIVTAGEKLYMA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCEEEEC
GKADRKMAACTACHGPRGNGLELANFPKISSQHPAYIKAQLEKFRSKERMNSPNGMMNDV
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
AAKLSDADIELLSKYISALH
HHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKLLIAFVAVLSFSSFVQAQGNIEAGKAKSATCAACHGADGNSASNLYPKLAGQHAPYL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHCCHHHCCCCCHHH
EKQLQQFKNGERANAIMMGMASVLSTQDMQDLAAYYASNTMTPEMVSPEIVTAGEKLYMA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCEEEEC
GKADRKMAACTACHGPRGNGLELANFPKISSQHPAYIKAQLEKFRSKERMNSPNGMMNDV
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
AAKLSDADIELLSKYISALH
HHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]