Click here to switch to the map view.

The map label for this gene is yihI [H]

Identifier: 119943995

GI number: 119943995

Start: 262345

End: 262911

Strand: Reverse

Name: yihI [H]

Synonym: Ping_0209

Alternate gene names: 119943995

Gene position: 262911-262345 (Counterclockwise)

Preceding gene: 119943996

Following gene: 119943994

Centisome position: 5.77

GC content: 40.56

Gene sequence:

>567_bases
ATGTCACGTACTAAAAAAACCCGCACCGCAGGCAATTCAGACGCAAAATTTGATGGTCAACGAAAAGAATCCTCTGCACA
ATCGCAGGTATCTCGTGAAAATAAACGTCAGTCTAAATTAAAAGGTAATAAAGCCGGCGCCCGTAATGCGATAGAGTCAA
AACAACAACAAAATACCAAAAAAGGGATAAATGATCACCGTATCGGCAGCCAAAAAGCGGTACCTTTAACTGTGGCTAAA
GAAGTACCTGCTGATATTGCTAAAGTGGCTCCTCAGCCAAAAACCAAAGTGGTAAAAATCCCGGCTGAAGTAAAACCATC
ACCTGAAGCAAAACAAGCGCCTGAACAGGAGATCGTTGAAATTGAGAATGATCAACGCCTGAATGAACTGCTTGAACAAC
TTGATAATGGTGAAAAGATTTCGAAAACGGATCAATCCTGGATTGATAAACAGATGCTGCGTCATCAACAGTTGATGAAA
GAGCTGGGTTGGTTAGACGATGAAGGTGAAGAAGATCTTCTTCAACAATTTGAAGATGCAGGCTCTGCATTAAATGAATT
TAAATAA

Upstream 100 bases:

>100_bases
TCTATCTGCTTTTTAAACACGATCATATCTGTTATTCTGCGTATATATTAATTCCCTATTTAAACACCCTGTAAAAAATA
ACAGCTAAAGGTAAATTGTC

Downstream 100 bases:

>100_bases
AAACGGGAAATTATAATGCAATTAAATGTTTTATTAGCAATATTTTTGGTTGTGATCATTATTGGCTTAGCTTTTTACGT
AGTCATTTTGCTTTACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSRTKKTRTAGNSDAKFDGQRKESSAQSQVSRENKRQSKLKGNKAGARNAIESKQQQNTKKGINDHRIGSQKAVPLTVAK
EVPADIAKVAPQPKTKVVKIPAEVKPSPEAKQAPEQEIVEIENDQRLNELLEQLDNGEKISKTDQSWIDKQMLRHQQLMK
ELGWLDDEGEEDLLQQFEDAGSALNEFK

Sequences:

>Translated_188_residues
MSRTKKTRTAGNSDAKFDGQRKESSAQSQVSRENKRQSKLKGNKAGARNAIESKQQQNTKKGINDHRIGSQKAVPLTVAK
EVPADIAKVAPQPKTKVVKIPAEVKPSPEAKQAPEQEIVEIENDQRLNELLEQLDNGEKISKTDQSWIDKQMLRHQQLMK
ELGWLDDEGEEDLLQQFEDAGSALNEFK
>Mature_187_residues
SRTKKTRTAGNSDAKFDGQRKESSAQSQVSRENKRQSKLKGNKAGARNAIESKQQQNTKKGINDHRIGSQKAVPLTVAKE
VPADIAKVAPQPKTKVVKIPAEVKPSPEAKQAPEQEIVEIENDQRLNELLEQLDNGEKISKTDQSWIDKQMLRHQQLMKE
LGWLDDEGEEDLLQQFEDAGSALNEFK

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis [H]

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family [H]

Homologues:

Organism=Escherichia coli, GI1790297, Length=122, Percent_Identity=35.2459016393443, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007336 [H]

Pfam domain/function: PF04220 DUF414 [H]

EC number: NA

Molecular weight: Translated: 21098; Mature: 20967

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTKKTRTAGNSDAKFDGQRKESSAQSQVSRENKRQSKLKGNKAGARNAIESKQQQNTK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KGINDHRIGSQKAVPLTVAKEVPADIAKVAPQPKTKVVKIPAEVKPSPEAKQAPEQEIVE
CCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHCCCHHHHHH
IENDQRLNELLEQLDNGEKISKTDQSWIDKQMLRHQQLMKELGWLDDEGEEDLLQQFEDA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GSALNEFK
HHHHHHCC
>Mature Secondary Structure 
SRTKKTRTAGNSDAKFDGQRKESSAQSQVSRENKRQSKLKGNKAGARNAIESKQQQNTK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KGINDHRIGSQKAVPLTVAKEVPADIAKVAPQPKTKVVKIPAEVKPSPEAKQAPEQEIVE
CCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHCCCHHHHHH
IENDQRLNELLEQLDNGEKISKTDQSWIDKQMLRHQQLMKELGWLDDEGEEDLLQQFEDA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GSALNEFK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA