| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is menC [H]
Identifier: 119943977
GI number: 119943977
Start: 240754
End: 241767
Strand: Reverse
Name: menC [H]
Synonym: Ping_0190
Alternate gene names: 119943977
Gene position: 241767-240754 (Counterclockwise)
Preceding gene: 119943978
Following gene: 119943976
Centisome position: 5.3
GC content: 39.35
Gene sequence:
>1014_bases ATGCAACAAGGGATTAATAAACCCATATTTCAACAGGCTAAACTATTTCGCTATCAACTTCCCTTTAAAATACCGATTGT CTTTAAAGGGATTAAGCTCACCGCTCGCGAGGGAGTGATCCTGCAGGTACAAAATGATAAGGGTGAGTTTAATTTTGCTG AAATCGCACCTTTACCCGGTTTTAGCAAGGAGACTCTGCAACAGGCGACAGCACAAATAATAGCGCTGCTAAACACCCCT CCGTTAAACAGCCAAAGCGATATCCTGTTATACCCCAGTGTGGCATTTGCACTTGACTGTATTTTACACAACATACCCAT CTCAGAATTATTTAAAACAGCGGAAAGCATCCCGCTATTGCAGGGTGATAACCACAGTGTGCTTAAACAGTATCTGCAAT TAAATAAGCCCAATAGCGTCAAATTAAAAATAGGCAGGCAATCCGTTGCGAAGGATATAACCCTATTTTCAGCATTAAGT GCCCTCAATAATAATTTATTGATACGTTGTGATGCAAATCAGAGCTGGACTTTTGCGCAAGCAGATCTGTTTTTTGCCAA TATTAATACTCAATTGATTGATTATATTGAGGAGCCAACAGCAAGCTTAAGCGATAATATCAACCTGGCTGAGCGTTACG AGGTGCAGCTTGCTTTGGATGAAACCCTACAGCAAAAGCAGTTCCAGTATCAGCACCATCGATGTTTCAAGGCTCTGATT TTAAAACCGACACTGATCGGCTCCTTTGAGCGCCTAAATTATTTTATAAAAACAGCCAAAAAATTTCATCTAAGTGTCAG TATCAGCTCCTCATTTGAATCGCCGCTGGGTTTAAGTCAATTAGCTTTTCTTGCCAGCCAATGGTCAAAAGAGGTCGATA TTTCCTGCGGATTGGATACGCTAAAATTTTTTGAAAGTGCCATCTTAAATAAAAATTCAGATAAAAAGTTAGATAATAAA ACACCTATTAATCAACAAGTTAAACATTTGGAGTGTCTATGGACAAGCAACTGA
Upstream 100 bases:
>100_bases AAATTGTCGCACAAAAGATAGGCACTATCGCTTATGAACTGGTGACCAAGTTAACCTCTCGTGTCACCCTGCATTACCAA GAGTGATTAACAGGCCGCAG
Downstream 100 bases:
>100_bases GTTTTTGCCCTGTCCGTCATCAGGCGATTATCAATGCGAATGCGCTAGCCATCGAGTCTGACGGGGTCTCGCTCACCTAC CAGCAGTTAGACAATAGACT
Product: O-succinylbenzoate-CoA synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MQQGINKPIFQQAKLFRYQLPFKIPIVFKGIKLTAREGVILQVQNDKGEFNFAEIAPLPGFSKETLQQATAQIIALLNTP PLNSQSDILLYPSVAFALDCILHNIPISELFKTAESIPLLQGDNHSVLKQYLQLNKPNSVKLKIGRQSVAKDITLFSALS ALNNNLLIRCDANQSWTFAQADLFFANINTQLIDYIEEPTASLSDNINLAERYEVQLALDETLQQKQFQYQHHRCFKALI LKPTLIGSFERLNYFIKTAKKFHLSVSISSSFESPLGLSQLAFLASQWSKEVDISCGLDTLKFFESAILNKNSDKKLDNK TPINQQVKHLECLWTSN
Sequences:
>Translated_337_residues MQQGINKPIFQQAKLFRYQLPFKIPIVFKGIKLTAREGVILQVQNDKGEFNFAEIAPLPGFSKETLQQATAQIIALLNTP PLNSQSDILLYPSVAFALDCILHNIPISELFKTAESIPLLQGDNHSVLKQYLQLNKPNSVKLKIGRQSVAKDITLFSALS ALNNNLLIRCDANQSWTFAQADLFFANINTQLIDYIEEPTASLSDNINLAERYEVQLALDETLQQKQFQYQHHRCFKALI LKPTLIGSFERLNYFIKTAKKFHLSVSISSSFESPLGLSQLAFLASQWSKEVDISCGLDTLKFFESAILNKNSDKKLDNK TPINQQVKHLECLWTSN >Mature_337_residues MQQGINKPIFQQAKLFRYQLPFKIPIVFKGIKLTAREGVILQVQNDKGEFNFAEIAPLPGFSKETLQQATAQIIALLNTP PLNSQSDILLYPSVAFALDCILHNIPISELFKTAESIPLLQGDNHSVLKQYLQLNKPNSVKLKIGRQSVAKDITLFSALS ALNNNLLIRCDANQSWTFAQADLFFANINTQLIDYIEEPTASLSDNINLAERYEVQLALDETLQQKQFQYQHHRCFKALI LKPTLIGSFERLNYFIKTAKKFHLSVSISSSFESPLGLSQLAFLASQWSKEVDISCGLDTLKFFESAILNKNSDKKLDNK TPINQQVKHLECLWTSN
Specific function: Converts SHCHC to OSB [H]
COG id: COG1441
COG function: function code H; O-succinylbenzoate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788596, Length=304, Percent_Identity=29.6052631578947, Blast_Score=150, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 38078; Mature: 38078
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00909 MR_MLE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQGINKPIFQQAKLFRYQLPFKIPIVFKGIKLTAREGVILQVQNDKGEFNFAEIAPLPG CCCCCCCHHHHHHHHHHEECCEEEEEEEECEEEEECCCEEEEEECCCCCCCCEEECCCCC FSKETLQQATAQIIALLNTPPLNSQSDILLYPSVAFALDCILHNIPISELFKTAESIPLL CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHCCCE QGDNHSVLKQYLQLNKPNSVKLKIGRQSVAKDITLFSALSALNNNLLIRCDANQSWTFAQ ECCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEE ADLFFANINTQLIDYIEEPTASLSDNINLAERYEVQLALDETLQQKQFQYQHHRCFKALI EEEEEEECCHHHHHHHHCCCHHHCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHH LKPTLIGSFERLNYFIKTAKKFHLSVSISSSFESPLGLSQLAFLASQWSKEVDISCGLDT HCCHHHCCHHHHHHHHHHCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCHHH LKFFESAILNKNSDKKLDNKTPINQQVKHLECLWTSN HHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEEECCC >Mature Secondary Structure MQQGINKPIFQQAKLFRYQLPFKIPIVFKGIKLTAREGVILQVQNDKGEFNFAEIAPLPG CCCCCCCHHHHHHHHHHEECCEEEEEEEECEEEEECCCEEEEEECCCCCCCCEEECCCCC FSKETLQQATAQIIALLNTPPLNSQSDILLYPSVAFALDCILHNIPISELFKTAESIPLL CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHCCCE QGDNHSVLKQYLQLNKPNSVKLKIGRQSVAKDITLFSALSALNNNLLIRCDANQSWTFAQ ECCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEE ADLFFANINTQLIDYIEEPTASLSDNINLAERYEVQLALDETLQQKQFQYQHHRCFKALI EEEEEEECCHHHHHHHHCCCHHHCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHH LKPTLIGSFERLNYFIKTAKKFHLSVSISSSFESPLGLSQLAFLASQWSKEVDISCGLDT HCCHHHCCHHHHHHHHHHCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCHHH LKFFESAILNKNSDKKLDNKTPINQQVKHLECLWTSN HHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA