| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943971
Identifier: 119943971
GI number: 119943971
Start: 232885
End: 233532
Strand: Reverse
Name: 119943971
Synonym: Ping_0184
Alternate gene names: NA
Gene position: 233532-232885 (Counterclockwise)
Preceding gene: 119943972
Following gene: 119943970
Centisome position: 5.12
GC content: 40.12
Gene sequence:
>648_bases ATGAGTTTCTTTAAATCACTGTTTGCTAAAAAGCAACCGCTGCCAACGCGCAGTTTAAACCATCCAAGCGAACTGCAAGC GGGTGACATATTCAGCTTTGGTGATAGTTTTGCACTTCCAAAAGCCATGCGTAAACAGCAGCTTGAAGTTAGCGAAATCA ATACAATCGAATTTAAACATGAACATTATATTCAGGTTGTAGGCCGGGGTATGCATCCTCAACCTGTCTATATCAGTTTT CCTAAAAACCCGCAAAAATTGATAAAGTACAGTTTATTACTGACCCGCAAGGATGTCGGGGAGTTATTTGATTTAGAAGA TTTTTCTAATATTTTTGAAGCCCCTGGCAATGCATGTTTAAAGCCAGTCACCTTCGAACATCCCTATGCAGAGTTGGTTG CGGCGCAGTATATTCAGCAGGATTTTATGACTACGGGTTATTTTCATCAGGAAGATTACCGTGACAGTACTCCTCCTCAG TTTAATGAAGAAAGGCATGGCCGTGAGTTTGAGTTTTACTCATTAGCAGGGGATCAGGAGCAGCGCTTTATTGAGATCTT TATTTTTGAAAATGGCGATACCGATGTCTACCTGTCTTTTTTAAGACCTGCCAATGAAATTACAGAGTTATGGATTAAAG GAGAATAA
Upstream 100 bases:
>100_bases ATTCTAGCGCGTTTAGAAACCAAATAAATGCCAATAAAATAGACAGCCAAACGACTCAGTGAACCTGATGCGTTTTTTTC TTTTTAAATAGGGAAAAATA
Downstream 100 bases:
>100_bases CCATGGTAAAGGGCGAGTTACCTAAAAAATGGCAGCAATCAGCCAATGTGGCAAAAGCAGTACAAATTGCCTTCGACATG GATACGCAACTGCAATACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSFFKSLFAKKQPLPTRSLNHPSELQAGDIFSFGDSFALPKAMRKQQLEVSEINTIEFKHEHYIQVVGRGMHPQPVYISF PKNPQKLIKYSLLLTRKDVGELFDLEDFSNIFEAPGNACLKPVTFEHPYAELVAAQYIQQDFMTTGYFHQEDYRDSTPPQ FNEERHGREFEFYSLAGDQEQRFIEIFIFENGDTDVYLSFLRPANEITELWIKGE
Sequences:
>Translated_215_residues MSFFKSLFAKKQPLPTRSLNHPSELQAGDIFSFGDSFALPKAMRKQQLEVSEINTIEFKHEHYIQVVGRGMHPQPVYISF PKNPQKLIKYSLLLTRKDVGELFDLEDFSNIFEAPGNACLKPVTFEHPYAELVAAQYIQQDFMTTGYFHQEDYRDSTPPQ FNEERHGREFEFYSLAGDQEQRFIEIFIFENGDTDVYLSFLRPANEITELWIKGE >Mature_214_residues SFFKSLFAKKQPLPTRSLNHPSELQAGDIFSFGDSFALPKAMRKQQLEVSEINTIEFKHEHYIQVVGRGMHPQPVYISFP KNPQKLIKYSLLLTRKDVGELFDLEDFSNIFEAPGNACLKPVTFEHPYAELVAAQYIQQDFMTTGYFHQEDYRDSTPPQF NEERHGREFEFYSLAGDQEQRFIEIFIFENGDTDVYLSFLRPANEITELWIKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25092; Mature: 24960
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFKSLFAKKQPLPTRSLNHPSELQAGDIFSFGDSFALPKAMRKQQLEVSEINTIEFKH CHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCHHHCEEEEECH EHYIQVVGRGMHPQPVYISFPKNPQKLIKYSLLLTRKDVGELFDLEDFSNIFEAPGNACL HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC KPVTFEHPYAELVAAQYIQQDFMTTGYFHQEDYRDSTPPQFNEERHGREFEFYSLAGDQE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCC QRFIEIFIFENGDTDVYLSFLRPANEITELWIKGE CEEEEEEEEECCCCEEEEEECCCHHHHHHEEECCC >Mature Secondary Structure SFFKSLFAKKQPLPTRSLNHPSELQAGDIFSFGDSFALPKAMRKQQLEVSEINTIEFKH HHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCHHHCEEEEECH EHYIQVVGRGMHPQPVYISFPKNPQKLIKYSLLLTRKDVGELFDLEDFSNIFEAPGNACL HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC KPVTFEHPYAELVAAQYIQQDFMTTGYFHQEDYRDSTPPQFNEERHGREFEFYSLAGDQE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCC QRFIEIFIFENGDTDVYLSFLRPANEITELWIKGE CEEEEEEEEECCCCEEEEEECCCHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA