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The map label for this gene is yjfJ [H]

Identifier: 119943972

GI number: 119943972

Start: 233944

End: 234627

Strand: Reverse

Name: yjfJ [H]

Synonym: Ping_0185

Alternate gene names: 119943972

Gene position: 234627-233944 (Counterclockwise)

Preceding gene: 119943973

Following gene: 119943971

Centisome position: 5.15

GC content: 39.18

Gene sequence:

>684_bases
ATGAGTATATTTAAAAAAATTATTACCGCTTTACGTGGCGGTGTACGCGAAACGGGTGAAGCTATTGTTGATGCAAATTC
AACCCGTATTTTTGAACAGGAAATTCGTGATTCAGAAAAACACGTTACCATCGCTAAACGTGATTTAACAGAAGTCATGG
CCAAACAGATGCAAGCAGCAAGAGAGCTGGCACAATTACAGGAAAGTATTAAAGAGCATGAGGGTTATGCTATGCAGGCG
CTTAACCAGGGCAATGAAGCATTAGCCATTGAGGTTGCTGAAAAAATTGCCGAACTTGAAAACAGTGCGGCGGATCAGCA
GCAGACAAATGAAAGTTACTTAAAAAGTGCAGATCGTTTAAAAGTATTAATTAAAAAAAGTGAACGCCAACTAACAGACT
ATAAACGTCAGTTAAGCATGGTTAAAACAACACAAAGCGTGCAAAAAGCAACATCAGCCATCACCGATAATTTTGTTGCC
AGTAACTCAAAACTGTTAAGTGCAAAAGATTCATTGGAGCGTATTAAACAAAAACAGACCCTATTCGATGATAAATTAAA
AGCCGCGGAGCAGCTTGAATCAGAAAACAGCGATACTTCATTAAAAAGTAAGCTGCAAGGGGCTGGCATTGGCGCACAGC
AATCAAATGCTCAATCGATTCTGGCACGTTTAAAAACCAAATAA

Upstream 100 bases:

>100_bases
GCTTGATGACATTGAATTGGAGATTGTGACATTAAGTGATAACAGTCTTGAAGTGATTAATGAAATGAGCAGCTACTTAA
ATTAATTAGGAGTATTAAAG

Downstream 100 bases:

>100_bases
ATGAGAAAGAATAGACAGCAGTGCTTCATTAAAAAGTAAGCTGCAAGGGGCTGGCATTGGCGTACAGCAATTAAATGCGA
AATCGATTCTGGCACGTTTA

Product: phage shock protein A, PspA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSIFKKIITALRGGVRETGEAIVDANSTRIFEQEIRDSEKHVTIAKRDLTEVMAKQMQAARELAQLQESIKEHEGYAMQA
LNQGNEALAIEVAEKIAELENSAADQQQTNESYLKSADRLKVLIKKSERQLTDYKRQLSMVKTTQSVQKATSAITDNFVA
SNSKLLSAKDSLERIKQKQTLFDDKLKAAEQLESENSDTSLKSKLQGAGIGAQQSNAQSILARLKTK

Sequences:

>Translated_227_residues
MSIFKKIITALRGGVRETGEAIVDANSTRIFEQEIRDSEKHVTIAKRDLTEVMAKQMQAARELAQLQESIKEHEGYAMQA
LNQGNEALAIEVAEKIAELENSAADQQQTNESYLKSADRLKVLIKKSERQLTDYKRQLSMVKTTQSVQKATSAITDNFVA
SNSKLLSAKDSLERIKQKQTLFDDKLKAAEQLESENSDTSLKSKLQGAGIGAQQSNAQSILARLKTK
>Mature_226_residues
SIFKKIITALRGGVRETGEAIVDANSTRIFEQEIRDSEKHVTIAKRDLTEVMAKQMQAARELAQLQESIKEHEGYAMQAL
NQGNEALAIEVAEKIAELENSAADQQQTNESYLKSADRLKVLIKKSERQLTDYKRQLSMVKTTQSVQKATSAITDNFVAS
NSKLLSAKDSLERIKQKQTLFDDKLKAAEQLESENSDTSLKSKLQGAGIGAQQSNAQSILARLKTK

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI1790625, Length=227, Percent_Identity=30.8370044052863, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 25215; Mature: 25084

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFKKIITALRGGVRETGEAIVDANSTRIFEQEIRDSEKHVTIAKRDLTEVMAKQMQAA
CHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RELAQLQESIKEHEGYAMQALNQGNEALAIEVAEKIAELENSAADQQQTNESYLKSADRL
HHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVLIKKSERQLTDYKRQLSMVKTTQSVQKATSAITDNFVASNSKLLSAKDSLERIKQKQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LFDDKLKAAEQLESENSDTSLKSKLQGAGIGAQQSNAQSILARLKTK
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIFKKIITALRGGVRETGEAIVDANSTRIFEQEIRDSEKHVTIAKRDLTEVMAKQMQAA
HHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RELAQLQESIKEHEGYAMQALNQGNEALAIEVAEKIAELENSAADQQQTNESYLKSADRL
HHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVLIKKSERQLTDYKRQLSMVKTTQSVQKATSAITDNFVASNSKLLSAKDSLERIKQKQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LFDDKLKAAEQLESENSDTSLKSKLQGAGIGAQQSNAQSILARLKTK
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]