| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119943970
Identifier: 119943970
GI number: 119943970
Start: 232541
End: 232882
Strand: Reverse
Name: 119943970
Synonym: Ping_0183
Alternate gene names: NA
Gene position: 232882-232541 (Counterclockwise)
Preceding gene: 119943971
Following gene: 119943968
Centisome position: 5.11
GC content: 42.4
Gene sequence:
>342_bases ATGGTAAAGGGCGAGTTACCTAAAAAATGGCAGCAATCAGCCAATGTGGCAAAAGCAGTACAAATTGCCTTCGACATGGA TACGCAACTGCAATACAGTATTCGTCGTAGTGCACTGGATAAGGGTATTAGCCCTTCGGAGCAAATTCGCTATTTGCTTG CTTTACCAACAAACAAAAAACCTAAACGCCCGCGTTTAACCGTCAGTTTAAGTGATCAAGATTACCAGCAGCTGGGTGAA CGTTACCAGATACCCGCTGATCAGCAATTAGAGATAAAAAAATCAGTTATTGAAGAGTTAACCCACTTTGCACAGCAGAG TGAATACGACAAACCTAAGTGA
Upstream 100 bases:
>100_bases TTGAGATCTTTATTTTTGAAAATGGCGATACCGATGTCTACCTGTCTTTTTTAAGACCTGCCAATGAAATTACAGAGTTA TGGATTAAAGGAGAATAACC
Downstream 100 bases:
>100_bases TTATTGCAAAAAGATCTCGCCCTGCACAGTAAAAGAGCAGCACAGCAGGGTAAGAGGAATAGCTATTAGCACTGATTAAA GTGCTAATGATTTATTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MVKGELPKKWQQSANVAKAVQIAFDMDTQLQYSIRRSALDKGISPSEQIRYLLALPTNKKPKRPRLTVSLSDQDYQQLGE RYQIPADQQLEIKKSVIEELTHFAQQSEYDKPK
Sequences:
>Translated_113_residues MVKGELPKKWQQSANVAKAVQIAFDMDTQLQYSIRRSALDKGISPSEQIRYLLALPTNKKPKRPRLTVSLSDQDYQQLGE RYQIPADQQLEIKKSVIEELTHFAQQSEYDKPK >Mature_113_residues MVKGELPKKWQQSANVAKAVQIAFDMDTQLQYSIRRSALDKGISPSEQIRYLLALPTNKKPKRPRLTVSLSDQDYQQLGE RYQIPADQQLEIKKSVIEELTHFAQQSEYDKPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13061; Mature: 13061
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKGELPKKWQQSANVAKAVQIAFDMDTQLQYSIRRSALDKGISPSEQIRYLLALPTNKK CCCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCC PKRPRLTVSLSDQDYQQLGERYQIPADQQLEIKKSVIEELTHFAQQSEYDKPK CCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVKGELPKKWQQSANVAKAVQIAFDMDTQLQYSIRRSALDKGISPSEQIRYLLALPTNKK CCCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCC PKRPRLTVSLSDQDYQQLGERYQIPADQQLEIKKSVIEELTHFAQQSEYDKPK CCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA