| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943968
Identifier: 119943968
GI number: 119943968
Start: 230064
End: 230744
Strand: Reverse
Name: 119943968
Synonym: Ping_0181
Alternate gene names: NA
Gene position: 230744-230064 (Counterclockwise)
Preceding gene: 119943970
Following gene: 119943967
Centisome position: 5.06
GC content: 38.62
Gene sequence:
>681_bases ATGCCAATTAACTCGATATTTGGAGTTTTTGCCAAATCTCCAATTAAACCCATTCTGACGCATATTGATAAAGTTGCGGC TTGCAGTGAGTTATTAATCCCTTTTTTTAAAGCGAGTAATGAACAGGATTGGATAAAAGCGGAAGAGATAAGAAAAGAGC TGTCCATGCTTGAAAAAAAAGCGGATGCTTTAAAACGAAAGCTCCACTTGAGATTACCAAAAGGTTTATTTATGCCTATT GCACGTGGTGATTTAATTGAGCTTGCTATCCGTCAGGACAAAATAGCCAATACGGCAAAAGATATTGCGGGACGGATTTT AGGCCGAAAGCTACAAATACCTCATGAAATAGAAAAAAATTTCATGGTCTATCTACAACGTTGTTTAGATGCCGTACAGC AGGCCCAAAAAGCCATTAATGAACTGGATGAATTATTAGAAACCGGTTTTAAAGGTCGCGAAGTGGATATAGTCACTAAG ATGCTTGCTGAACTTGACGCGATTGAAGATGATACAGACTCTTTACAGATTAAACTTCGCGCAGATCTTTTTGCTGTCGA ACAGCATTACAATGCCGTTGATGTTATGTTTCTTTACCAAATTTTAGAATGGGTAGGCCGTCTTGCGGATCATTCTGAAT CAATCGGTGATCAACTCGAACTTATGATTGCGCGTTCATAA
Upstream 100 bases:
>100_bases ATTCAGATTCAATTATGTGCAAAAGAAAGTTACCATGCGCGAAATTTTATTGAATTTTAACATTCGTATGCTAAATACGG CCTAATAAATAGGATCACCT
Downstream 100 bases:
>100_bases CGCTTAAAGGATTTTTATGGATATTTTAACTTCATACGGAAGCATTCTTGTACTATTTGCGGGCGCTGTTGGTTTCCTTA TGGCTTGGGGTATAGGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MPINSIFGVFAKSPIKPILTHIDKVAACSELLIPFFKASNEQDWIKAEEIRKELSMLEKKADALKRKLHLRLPKGLFMPI ARGDLIELAIRQDKIANTAKDIAGRILGRKLQIPHEIEKNFMVYLQRCLDAVQQAQKAINELDELLETGFKGREVDIVTK MLAELDAIEDDTDSLQIKLRADLFAVEQHYNAVDVMFLYQILEWVGRLADHSESIGDQLELMIARS
Sequences:
>Translated_226_residues MPINSIFGVFAKSPIKPILTHIDKVAACSELLIPFFKASNEQDWIKAEEIRKELSMLEKKADALKRKLHLRLPKGLFMPI ARGDLIELAIRQDKIANTAKDIAGRILGRKLQIPHEIEKNFMVYLQRCLDAVQQAQKAINELDELLETGFKGREVDIVTK MLAELDAIEDDTDSLQIKLRADLFAVEQHYNAVDVMFLYQILEWVGRLADHSESIGDQLELMIARS >Mature_225_residues PINSIFGVFAKSPIKPILTHIDKVAACSELLIPFFKASNEQDWIKAEEIRKELSMLEKKADALKRKLHLRLPKGLFMPIA RGDLIELAIRQDKIANTAKDIAGRILGRKLQIPHEIEKNFMVYLQRCLDAVQQAQKAINELDELLETGFKGREVDIVTKM LAELDAIEDDTDSLQIKLRADLFAVEQHYNAVDVMFLYQILEWVGRLADHSESIGDQLELMIARS
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 25750; Mature: 25619
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPINSIFGVFAKSPIKPILTHIDKVAACSELLIPFFKASNEQDWIKAEEIRKELSMLEKK CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ADALKRKLHLRLPKGLFMPIARGDLIELAIRQDKIANTAKDIAGRILGRKLQIPHEIEKN HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH FMVYLQRCLDAVQQAQKAINELDELLETGFKGREVDIVTKMLAELDAIEDDTDSLQIKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEH ADLFAVEQHYNAVDVMFLYQILEWVGRLADHSESIGDQLELMIARS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PINSIFGVFAKSPIKPILTHIDKVAACSELLIPFFKASNEQDWIKAEEIRKELSMLEKK CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ADALKRKLHLRLPKGLFMPIARGDLIELAIRQDKIANTAKDIAGRILGRKLQIPHEIEKN HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH FMVYLQRCLDAVQQAQKAINELDELLETGFKGREVDIVTKMLAELDAIEDDTDSLQIKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEH ADLFAVEQHYNAVDVMFLYQILEWVGRLADHSESIGDQLELMIARS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]