| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943941
Identifier: 119943941
GI number: 119943941
Start: 201571
End: 203889
Strand: Reverse
Name: 119943941
Synonym: Ping_0154
Alternate gene names: NA
Gene position: 203889-201571 (Counterclockwise)
Preceding gene: 119943942
Following gene: 119943940
Centisome position: 4.47
GC content: 35.92
Gene sequence:
>2319_bases ATGGATGACACCACTAGGTCCGATGAAAACGATATAAAGTCCCAACAAATTATTACAGAGTGGAATAATAACCAAGGTGT CATTAGGCCTCTATTTATCCCAGAAAGCACACAATTCACTATCCCCGCGATGAGGAAAAACGTCGCAAAAACGGTTAGGT TAAGTGATATAAATTGTAAATATAAAAAACTTATTTTTTCGGCTCTTTATACTGCTTTTTATATTATATATTTCACAGAC AGAGAGGCTATATCAAATCGCGTTATATACCGTCGAACTGTAGTAAGTTTTATTGAATATCTCAATGAAAGAACTATCAC CAAAAATAACAGAACTAGAATATTTAAAGATTACGAAGAGTTTCGTGTAAAAAAAATGGGAGTAAAGCCTCAATCTACCG GTCTTAAAAGCATAAGAAAATTTATTTATTTTAGCATTGCCTACGAGCCATTCTCTAACCTATTAAGTGCAGAACAATAT AAATACCTTGGGGTGCTTAATAAAACAAAAGCAGCCCCCTCAGAGAAGCAAGAATCATATACCCTAACAGACTGGTTTTC TTTTCATAGTTGGCTGCGTAGAGATGATATAGGCATTGGTAATGAGCTATTTAATAGATTGGCATCGCCGAAAGCATTAA GTTTATCACTCCGTATTACTGCTGAAGTAGCACTTTACAGTATACAGCAGGCTAAATACGCACTAATCGAATTCTTTAAA GAGAATAATATAACTACTCATCAGATACTGATTCCAATGCCAGCCCCCAAAAAAGCAGATTTTTCAGCTGAAGAATTTAA AGATAAACGTAAGCGTTGGCTCTGTTATATCTACCCTCATATCACTGAGCAATTGGCTTACCTACAAAAAACTTACAAAA AAAGCCCCTGCCAGAATAAATATTTAGGCATAGCATTTGAAATTATTCTTCATTCATGGTGTAAAAGTAATTCTATTGGG GATTCCTTAGCTAGGTTTCATAAAGAACAATACGTTGAAAGGTTTATAGTAGATAAGGACAAACGAAACACGGATCGCTT TAGCATTACTGAATCGTGGCTGTTCTCACATCAATTTTTATATGCTATTTCAGAGTATGCTCATAGCGAGAAAAAAGGTA TTTTGCCTGTTTGTAAGGCAGAGCATCTGCTATTTCAATGGTTAATGGCCTACCAAAGTGTTCAACCTTCAGATATTGCA AAGCTAAAGTTAAGTGATTTTAACTTTTTGAAACGCAGGAATGGCATCATTACACATATATCTAGCAGTTATTTTAAAGG CCGATCGCAAGCTACGCATTACCTAAAAGATATCAAAGCCAATAGCACAATGGGGAAGGCTGTATTGAGTTTTATTAATG ACAATACAGCGAACAGGAAAATTGATTTAGGTGCTTTAACTACATCATATAATGATGGCGGTATGACAACATATCAACAG GGATTATTAGCACCTTTAATTTCGTTGCTTGCAACATCTACCATCAATTTAGACATAAACCATGCGCTACAAAAACATAA TACAACATCAGTCTTTATTGAAGCTTTTAATCTTATTATAAGGAGCGGTGTCGATTATGAAAAATACCGTGTTGACCAAA GTAGGAAATCTAGTACTACTACTGAGGCTAGCCGGGAGAAATGGCAGGAAAGGTGTGAGACCTACTGTAATAAAAATATA TTTGGTCTTTCAGCAATTAAAAATAGTGCTATTCACGCTCGATCAGATTCTTTCAGCCCCACAATGATGCAAAACTACAA TTCTCACTCTAATGAAACTGAGCAAAAAAATTATCGGACCGAGGCTAGCCTACAATGGCTCAATAGCTGCGGGCGGGTAA CACGGGCTGTAATGCAAGATATGTATATTAATGTGTTCAGCCCATCTAAAGCACAAATCCAGTCTTATAATAGTGAATTT ACGCAAGCTGCTGAGTTAATAAATTCACACAAAACCGATCTGTTAAATCGGATTAAAACAATAACAGGACAAAAGAGTGG GCGCGTAGATGAATTAGGGTTTATAGAATCAAATAAGGTCCATCATACAGAACTAGCTGATGTGATACTTTTAGTTGATG CCCCTGAAACAGTGATGAAGTTTTATCATTACGAGGCAGAAGTGAGTAAAAAATACAAGTCACTCGCATCGAAATCGCCT GAGTTCTTATTATTTACAGTACTACCTATGGCTGAATATGTTTCAACATTACTGCATGAAAAGAAATTTTCAATGGAATC CATGAAGAAGGGAAAGGCTCTTTATCTAAAATATGCCGCACATCTTCCTCCCCATTTCACTTCTCATTTAGGAATGTAA
Upstream 100 bases:
>100_bases GGGTCGAGTAAATCAGCCCCTACAACGACAAAAAACTATATTCGTAGCTGTCATATAAAAGAAAGCTTTGAAGCAAGCGA GGAAATAAATGACTACAGAT
Downstream 100 bases:
>100_bases TATGAGAGAAACTGATTTACATGCTAAGACTTCTGCCTATCAAAATTTTATGGACATGCTAGATGATCTATTGCAGCAAT TATCACCGATTAACAGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 772; Mature: 772
Protein sequence:
>772_residues MDDTTRSDENDIKSQQIITEWNNNQGVIRPLFIPESTQFTIPAMRKNVAKTVRLSDINCKYKKLIFSALYTAFYIIYFTD REAISNRVIYRRTVVSFIEYLNERTITKNNRTRIFKDYEEFRVKKMGVKPQSTGLKSIRKFIYFSIAYEPFSNLLSAEQY KYLGVLNKTKAAPSEKQESYTLTDWFSFHSWLRRDDIGIGNELFNRLASPKALSLSLRITAEVALYSIQQAKYALIEFFK ENNITTHQILIPMPAPKKADFSAEEFKDKRKRWLCYIYPHITEQLAYLQKTYKKSPCQNKYLGIAFEIILHSWCKSNSIG DSLARFHKEQYVERFIVDKDKRNTDRFSITESWLFSHQFLYAISEYAHSEKKGILPVCKAEHLLFQWLMAYQSVQPSDIA KLKLSDFNFLKRRNGIITHISSSYFKGRSQATHYLKDIKANSTMGKAVLSFINDNTANRKIDLGALTTSYNDGGMTTYQQ GLLAPLISLLATSTINLDINHALQKHNTTSVFIEAFNLIIRSGVDYEKYRVDQSRKSSTTTEASREKWQERCETYCNKNI FGLSAIKNSAIHARSDSFSPTMMQNYNSHSNETEQKNYRTEASLQWLNSCGRVTRAVMQDMYINVFSPSKAQIQSYNSEF TQAAELINSHKTDLLNRIKTITGQKSGRVDELGFIESNKVHHTELADVILLVDAPETVMKFYHYEAEVSKKYKSLASKSP EFLLFTVLPMAEYVSTLLHEKKFSMESMKKGKALYLKYAAHLPPHFTSHLGM
Sequences:
>Translated_772_residues MDDTTRSDENDIKSQQIITEWNNNQGVIRPLFIPESTQFTIPAMRKNVAKTVRLSDINCKYKKLIFSALYTAFYIIYFTD REAISNRVIYRRTVVSFIEYLNERTITKNNRTRIFKDYEEFRVKKMGVKPQSTGLKSIRKFIYFSIAYEPFSNLLSAEQY KYLGVLNKTKAAPSEKQESYTLTDWFSFHSWLRRDDIGIGNELFNRLASPKALSLSLRITAEVALYSIQQAKYALIEFFK ENNITTHQILIPMPAPKKADFSAEEFKDKRKRWLCYIYPHITEQLAYLQKTYKKSPCQNKYLGIAFEIILHSWCKSNSIG DSLARFHKEQYVERFIVDKDKRNTDRFSITESWLFSHQFLYAISEYAHSEKKGILPVCKAEHLLFQWLMAYQSVQPSDIA KLKLSDFNFLKRRNGIITHISSSYFKGRSQATHYLKDIKANSTMGKAVLSFINDNTANRKIDLGALTTSYNDGGMTTYQQ GLLAPLISLLATSTINLDINHALQKHNTTSVFIEAFNLIIRSGVDYEKYRVDQSRKSSTTTEASREKWQERCETYCNKNI FGLSAIKNSAIHARSDSFSPTMMQNYNSHSNETEQKNYRTEASLQWLNSCGRVTRAVMQDMYINVFSPSKAQIQSYNSEF TQAAELINSHKTDLLNRIKTITGQKSGRVDELGFIESNKVHHTELADVILLVDAPETVMKFYHYEAEVSKKYKSLASKSP EFLLFTVLPMAEYVSTLLHEKKFSMESMKKGKALYLKYAAHLPPHFTSHLGM >Mature_772_residues MDDTTRSDENDIKSQQIITEWNNNQGVIRPLFIPESTQFTIPAMRKNVAKTVRLSDINCKYKKLIFSALYTAFYIIYFTD REAISNRVIYRRTVVSFIEYLNERTITKNNRTRIFKDYEEFRVKKMGVKPQSTGLKSIRKFIYFSIAYEPFSNLLSAEQY KYLGVLNKTKAAPSEKQESYTLTDWFSFHSWLRRDDIGIGNELFNRLASPKALSLSLRITAEVALYSIQQAKYALIEFFK ENNITTHQILIPMPAPKKADFSAEEFKDKRKRWLCYIYPHITEQLAYLQKTYKKSPCQNKYLGIAFEIILHSWCKSNSIG DSLARFHKEQYVERFIVDKDKRNTDRFSITESWLFSHQFLYAISEYAHSEKKGILPVCKAEHLLFQWLMAYQSVQPSDIA KLKLSDFNFLKRRNGIITHISSSYFKGRSQATHYLKDIKANSTMGKAVLSFINDNTANRKIDLGALTTSYNDGGMTTYQQ GLLAPLISLLATSTINLDINHALQKHNTTSVFIEAFNLIIRSGVDYEKYRVDQSRKSSTTTEASREKWQERCETYCNKNI FGLSAIKNSAIHARSDSFSPTMMQNYNSHSNETEQKNYRTEASLQWLNSCGRVTRAVMQDMYINVFSPSKAQIQSYNSEF TQAAELINSHKTDLLNRIKTITGQKSGRVDELGFIESNKVHHTELADVILLVDAPETVMKFYHYEAEVSKKYKSLASKSP EFLLFTVLPMAEYVSTLLHEKKFSMESMKKGKALYLKYAAHLPPHFTSHLGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89312; Mature: 89312
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDTTRSDENDIKSQQIITEWNNNQGVIRPLFIPESTQFTIPAMRKNVAKTVRLSDINCK CCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCCCCEECHHHHHHHHHHEEECCCCCH YKKLIFSALYTAFYIIYFTDREAISNRVIYRRTVVSFIEYLNERTITKNNRTRIFKDYEE HHHHHHHHHHHHHEEEEEECHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH FRVKKMGVKPQSTGLKSIRKFIYFSIAYEPFSNLLSAEQYKYLGVLNKTKAAPSEKQESY HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TLTDWFSFHSWLRRDDIGIGNELFNRLASPKALSLSLRITAEVALYSIQQAKYALIEFFK CHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHH ENNITTHQILIPMPAPKKADFSAEEFKDKRKRWLCYIYPHITEQLAYLQKTYKKSPCQNK CCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCCCCCC YLGIAFEIILHSWCKSNSIGDSLARFHKEQYVERFIVDKDKRNTDRFSITESWLFSHQFL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHH YAISEYAHSEKKGILPVCKAEHLLFQWLMAYQSVQPSDIAKLKLSDFNFLKRRNGIITHI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEECHHHHHHHCCCEEEEE SSSYFKGRSQATHYLKDIKANSTMGKAVLSFINDNTANRKIDLGALTTSYNDGGMTTYQQ CHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHH GLLAPLISLLATSTINLDINHALQKHNTTSVFIEAFNLIIRSGVDYEKYRVDQSRKSSTT HHHHHHHHHHHHHHEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCHHCCCCC TEASREKWQERCETYCNKNIFGLSAIKNSAIHARSDSFSPTMMQNYNSHSNETEQKNYRT HHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH EASLQWLNSCGRVTRAVMQDMYINVFSPSKAQIQSYNSEFTQAAELINSHKTDLLNRIKT HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITGQKSGRVDELGFIESNKVHHTELADVILLVDAPETVMKFYHYEAEVSKKYKSLASKSP HCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC EFLLFTVLPMAEYVSTLLHEKKFSMESMKKGKALYLKYAAHLPPHFTSHLGM CEEEEHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEHHCCCCHHHHHCCC >Mature Secondary Structure MDDTTRSDENDIKSQQIITEWNNNQGVIRPLFIPESTQFTIPAMRKNVAKTVRLSDINCK CCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCCCCEECHHHHHHHHHHEEECCCCCH YKKLIFSALYTAFYIIYFTDREAISNRVIYRRTVVSFIEYLNERTITKNNRTRIFKDYEE HHHHHHHHHHHHHEEEEEECHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH FRVKKMGVKPQSTGLKSIRKFIYFSIAYEPFSNLLSAEQYKYLGVLNKTKAAPSEKQESY HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TLTDWFSFHSWLRRDDIGIGNELFNRLASPKALSLSLRITAEVALYSIQQAKYALIEFFK CHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHH ENNITTHQILIPMPAPKKADFSAEEFKDKRKRWLCYIYPHITEQLAYLQKTYKKSPCQNK CCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCCCCCC YLGIAFEIILHSWCKSNSIGDSLARFHKEQYVERFIVDKDKRNTDRFSITESWLFSHQFL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHH YAISEYAHSEKKGILPVCKAEHLLFQWLMAYQSVQPSDIAKLKLSDFNFLKRRNGIITHI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEECHHHHHHHCCCEEEEE SSSYFKGRSQATHYLKDIKANSTMGKAVLSFINDNTANRKIDLGALTTSYNDGGMTTYQQ CHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHH GLLAPLISLLATSTINLDINHALQKHNTTSVFIEAFNLIIRSGVDYEKYRVDQSRKSSTT HHHHHHHHHHHHHHEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCHHCCCCC TEASREKWQERCETYCNKNIFGLSAIKNSAIHARSDSFSPTMMQNYNSHSNETEQKNYRT HHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH EASLQWLNSCGRVTRAVMQDMYINVFSPSKAQIQSYNSEFTQAAELINSHKTDLLNRIKT HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITGQKSGRVDELGFIESNKVHHTELADVILLVDAPETVMKFYHYEAEVSKKYKSLASKSP HCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC EFLLFTVLPMAEYVSTLLHEKKFSMESMKKGKALYLKYAAHLPPHFTSHLGM CEEEEHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA