| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943940
Identifier: 119943940
GI number: 119943940
Start: 198816
End: 201569
Strand: Reverse
Name: 119943940
Synonym: Ping_0153
Alternate gene names: NA
Gene position: 201569-198816 (Counterclockwise)
Preceding gene: 119943941
Following gene: 119943939
Centisome position: 4.42
GC content: 35.8
Gene sequence:
>2754_bases ATGAGAGAAACTGATTTACATGCTAAGACTTCTGCCTATCAAAATTTTATGGACATGCTAGATGATCTATTGCAGCAATT ATCACCGATTAACAGTGTGACTATTACCGATGATCTATGGATTTTCACCGACCGAGAGAAAAAAATATCAATCAATTTCA ACCATTTCAACCTCCCTTACACGGAGTTTGTACGGGAAGTTTCACTTTCTTCTAAAAGTGATTTAATACGTGTAACTACA AAAGAGTTTGCTAAGCTACTCTGGCTATCTCAGCACGAAGATAAAGTAACCTATCAATCGTCAATAAAAATTTTAGATGT ATTATCTTTATTGTTTAGTTACCTTGCAAACAAACAAATCACCTATATTGCTGAAAGTGAATTAGAGGACTTTTTTACAT ACCTACTAAGCTATAACCTAAATCAGGAAGGACTAAATTTACGGTTTTATCCACCGGCTTATCGCACTCGATTACACTTT TTAAACATAAAACTTTTGCTTCAAACGTTAAAAATTTATGGCTGTCCCTCTCTATTACCTCGGTTACATTATAATAAATA CAAAGATGCGATTAACAACTCATGTTTAAATGTATTAGGCATTACTTTTTCTGATTATCAAAAAGGAGGGTCATTTAATT TTCTCGGTCTCGACACTGGCCGTCATTATATTGATTTTTGCTCTCAAACGTTTGAAGAACAGATTTCTTATGCGACAGCT TGCCGGCTAACCATGAGTGAAATGTCAACTGAAGTAAGTAGGCAAATGGGGTATAAATATACCGATGTTATTCAGCTAGT ATGCTCAGAAATTCTTATGGGTATACCTAGTAATGAAATAAGAGGAAGGGAAATAAAAAAAACATCTCTCCCAACCCTAA AGGGTATAGTTGAGATTGTACACTGCCTTTTTTTTAAGCATTATTATGCTGTAATACAACAGAATAATGCCTTTAAACTG GATACTATTAATAGCATTATAGTCAAATTAGGTTTACCAGAAAACCGTTTTGATAATCAAGAATTTGTTAGATCAATGTT ATTTGCTCGTTACTATGGTAAAAATGGTAAATCACGCTTAAACATTATAAAGGAATTTATAGCATCATTAAGATCAACGC ATCCAAAGCTAAAACCACAGTGGTCTGAATCTGATTTTAATGGAATCGTAGATAGTGTCACTCAAACTACACCAATTGAT ATCAATAGCGTGGTATCTTTCTTTAAAGAGCACCATTCGATGTGCGATAAGCTACAACGATTTAATAAAATTACACATAC TATCGGAGTTAGAAAATTAGAACGAGCTTTAATGAATGTTGAATCAGCAGGTGTAACCTTATTTGTTGCATTAACAGGGT GGCGAGCCACCGAATTTGGCTTCGCACTCAACAATATCCATATTAGTGTGAATAAAGATGTTCTTGATAGCACCTACACA CCCTATCAATTTCATGTCAAATGGATAGTACCAAAAACCAGTAAAAATACACCTCTTAACCGTGAAATCACTTTATCTGG CTATTTATTAGCGACACAATTAGCTACATTAAATCAGTCAGGTATTAATAAGCCTTGTTTGCATTCAGCAATGAAAAAGG CCTCGATTAACAAGGTTATTACAAATCGGGTCAGTAGAATCTGGCAAGGTTTTATTGATTATTACAGCTTGTTTGAAGAG TTAGATGAATTAGAAAAACTGATAGTGTTGCAAAAGGACACGACACTTTCGAATCATCAGCAATCCGAGCTAGTGAAATT ATCGAAAAACCATAACTTACAACAGAGCCAAACTCAAGCACTACAGGGCTTACGAGATCAATTGCGTGAGGAACTCCCTT GCTACCTTTTGGCTAATCAAGTCAACCAACAATCATTTGGTAAAAAACTTAAAGGTTACCGAGAAGGTTCACTTAAAACA GAAGAGCGGGCTTTACTGGAAAAATACTTGTCTGATGATACTAAAATGTCACTCAAGTCAGGAATTACACTGGACCAAGC AACAGTAAAACATATCAAAGAAGAATTTTTACAACGTGCAACTCATCCTACCCCTCATGCACTTCGCCACATATGGGCTG AAGCGGTATTACGTCGCTACCGTGGTAATGTTGGCAGGTTTATACGCGCTAACTTTAAACATTTAAACGATGATTTTTTT ATGGCATATCTACGAGATAAAGAAATGAGTGCCGTGTATGAAATTTCACAACGAAATGTGATCAACGATATTGTCCGTCA ACACTTACTTGCACTCAAGGATGACCAACGAAACTATACCGGTGGATTTGATAGTTATTTGAACAAAGTCGTTAATATAA CTAATATAGCTTCAAATGAAGACTACATTAAAATGTCCCAAAAAATCAGCGACCGTATAGGTTCTATAAAACCAAATCCA TGGGTAACATGCCTATTAAGATCTGGAACAGAGGAAAGAGCTAAATGCTCGCAAAATGGGATCCCTCAACGCCGTAATGC ATCCCCTAAGTTATGCCTAGGGTGTATCAATGCAGACATCACTGAGGGAAATTACATCGGTATTGTGGTCTACACAAGTA TTGATGTGGCCGCATGTCGTAACCCTGAGTTACCTGCATTTATCAAAATACAGCACCTTCCTGTTTTACAATTAGCTATT TCACAGATTAAAAAATTACGAAATAACAGCCAAGACGAAAAGTACAACAAGTTCATCAACCACTTACAAGAGAGCATAGA TATTGCACAAAAAACTATAGATGGAGCGAAATGA
Upstream 100 bases:
>100_bases AAGAAATTTTCAATGGAATCCATGAAGAAGGGAAAGGCTCTTTATCTAAAATATGCCGCACATCTTCCTCCCCATTTCAC TTCTCATTTAGGAATGTAAT
Downstream 100 bases:
>100_bases TGGATGATGGTTACCTAGAGCAATTTTTAGATGCAGATGAGTTATCGAATGAGCCGTTGGAGGAAGTAGAAAAAGAGAAA ATCCCCAAGTGGGTAAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 917; Mature: 917
Protein sequence:
>917_residues MRETDLHAKTSAYQNFMDMLDDLLQQLSPINSVTITDDLWIFTDREKKISINFNHFNLPYTEFVREVSLSSKSDLIRVTT KEFAKLLWLSQHEDKVTYQSSIKILDVLSLLFSYLANKQITYIAESELEDFFTYLLSYNLNQEGLNLRFYPPAYRTRLHF LNIKLLLQTLKIYGCPSLLPRLHYNKYKDAINNSCLNVLGITFSDYQKGGSFNFLGLDTGRHYIDFCSQTFEEQISYATA CRLTMSEMSTEVSRQMGYKYTDVIQLVCSEILMGIPSNEIRGREIKKTSLPTLKGIVEIVHCLFFKHYYAVIQQNNAFKL DTINSIIVKLGLPENRFDNQEFVRSMLFARYYGKNGKSRLNIIKEFIASLRSTHPKLKPQWSESDFNGIVDSVTQTTPID INSVVSFFKEHHSMCDKLQRFNKITHTIGVRKLERALMNVESAGVTLFVALTGWRATEFGFALNNIHISVNKDVLDSTYT PYQFHVKWIVPKTSKNTPLNREITLSGYLLATQLATLNQSGINKPCLHSAMKKASINKVITNRVSRIWQGFIDYYSLFEE LDELEKLIVLQKDTTLSNHQQSELVKLSKNHNLQQSQTQALQGLRDQLREELPCYLLANQVNQQSFGKKLKGYREGSLKT EERALLEKYLSDDTKMSLKSGITLDQATVKHIKEEFLQRATHPTPHALRHIWAEAVLRRYRGNVGRFIRANFKHLNDDFF MAYLRDKEMSAVYEISQRNVINDIVRQHLLALKDDQRNYTGGFDSYLNKVVNITNIASNEDYIKMSQKISDRIGSIKPNP WVTCLLRSGTEERAKCSQNGIPQRRNASPKLCLGCINADITEGNYIGIVVYTSIDVAACRNPELPAFIKIQHLPVLQLAI SQIKKLRNNSQDEKYNKFINHLQESIDIAQKTIDGAK
Sequences:
>Translated_917_residues MRETDLHAKTSAYQNFMDMLDDLLQQLSPINSVTITDDLWIFTDREKKISINFNHFNLPYTEFVREVSLSSKSDLIRVTT KEFAKLLWLSQHEDKVTYQSSIKILDVLSLLFSYLANKQITYIAESELEDFFTYLLSYNLNQEGLNLRFYPPAYRTRLHF LNIKLLLQTLKIYGCPSLLPRLHYNKYKDAINNSCLNVLGITFSDYQKGGSFNFLGLDTGRHYIDFCSQTFEEQISYATA CRLTMSEMSTEVSRQMGYKYTDVIQLVCSEILMGIPSNEIRGREIKKTSLPTLKGIVEIVHCLFFKHYYAVIQQNNAFKL DTINSIIVKLGLPENRFDNQEFVRSMLFARYYGKNGKSRLNIIKEFIASLRSTHPKLKPQWSESDFNGIVDSVTQTTPID INSVVSFFKEHHSMCDKLQRFNKITHTIGVRKLERALMNVESAGVTLFVALTGWRATEFGFALNNIHISVNKDVLDSTYT PYQFHVKWIVPKTSKNTPLNREITLSGYLLATQLATLNQSGINKPCLHSAMKKASINKVITNRVSRIWQGFIDYYSLFEE LDELEKLIVLQKDTTLSNHQQSELVKLSKNHNLQQSQTQALQGLRDQLREELPCYLLANQVNQQSFGKKLKGYREGSLKT EERALLEKYLSDDTKMSLKSGITLDQATVKHIKEEFLQRATHPTPHALRHIWAEAVLRRYRGNVGRFIRANFKHLNDDFF MAYLRDKEMSAVYEISQRNVINDIVRQHLLALKDDQRNYTGGFDSYLNKVVNITNIASNEDYIKMSQKISDRIGSIKPNP WVTCLLRSGTEERAKCSQNGIPQRRNASPKLCLGCINADITEGNYIGIVVYTSIDVAACRNPELPAFIKIQHLPVLQLAI SQIKKLRNNSQDEKYNKFINHLQESIDIAQKTIDGAK >Mature_917_residues MRETDLHAKTSAYQNFMDMLDDLLQQLSPINSVTITDDLWIFTDREKKISINFNHFNLPYTEFVREVSLSSKSDLIRVTT KEFAKLLWLSQHEDKVTYQSSIKILDVLSLLFSYLANKQITYIAESELEDFFTYLLSYNLNQEGLNLRFYPPAYRTRLHF LNIKLLLQTLKIYGCPSLLPRLHYNKYKDAINNSCLNVLGITFSDYQKGGSFNFLGLDTGRHYIDFCSQTFEEQISYATA CRLTMSEMSTEVSRQMGYKYTDVIQLVCSEILMGIPSNEIRGREIKKTSLPTLKGIVEIVHCLFFKHYYAVIQQNNAFKL DTINSIIVKLGLPENRFDNQEFVRSMLFARYYGKNGKSRLNIIKEFIASLRSTHPKLKPQWSESDFNGIVDSVTQTTPID INSVVSFFKEHHSMCDKLQRFNKITHTIGVRKLERALMNVESAGVTLFVALTGWRATEFGFALNNIHISVNKDVLDSTYT PYQFHVKWIVPKTSKNTPLNREITLSGYLLATQLATLNQSGINKPCLHSAMKKASINKVITNRVSRIWQGFIDYYSLFEE LDELEKLIVLQKDTTLSNHQQSELVKLSKNHNLQQSQTQALQGLRDQLREELPCYLLANQVNQQSFGKKLKGYREGSLKT EERALLEKYLSDDTKMSLKSGITLDQATVKHIKEEFLQRATHPTPHALRHIWAEAVLRRYRGNVGRFIRANFKHLNDDFF MAYLRDKEMSAVYEISQRNVINDIVRQHLLALKDDQRNYTGGFDSYLNKVVNITNIASNEDYIKMSQKISDRIGSIKPNP WVTCLLRSGTEERAKCSQNGIPQRRNASPKLCLGCINADITEGNYIGIVVYTSIDVAACRNPELPAFIKIQHLPVLQLAI SQIKKLRNNSQDEKYNKFINHLQESIDIAQKTIDGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105575; Mature: 105575
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRETDLHAKTSAYQNFMDMLDDLLQQLSPINSVTITDDLWIFTDREKKISINFNHFNLPY CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCEEEEEEEECCCCH TEFVREVSLSSKSDLIRVTTKEFAKLLWLSQHEDKVTYQSSIKILDVLSLLFSYLANKQI HHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE TYIAESELEDFFTYLLSYNLNQEGLNLRFYPPAYRTRLHFLNIKLLLQTLKIYGCPSLLP EEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH RLHYNKYKDAINNSCLNVLGITFSDYQKGGSFNFLGLDTGRHYIDFCSQTFEEQISYATA HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH CRLTMSEMSTEVSRQMGYKYTDVIQLVCSEILMGIPSNEIRGREIKKTSLPTLKGIVEIV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHH HCLFFKHYYAVIQQNNAFKLDTINSIIVKLGLPENRFDNQEFVRSMLFARYYGKNGKSRL HHHHHHHHHHHHCCCCCEEEHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHH NIIKEFIASLRSTHPKLKPQWSESDFNGIVDSVTQTTPIDINSVVSFFKEHHSMCDKLQR HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH FNKITHTIGVRKLERALMNVESAGVTLFVALTGWRATEFGFALNNIHISVNKDVLDSTYT HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHCEEEEEEEEEECCHHHCCCCC PYQFHVKWIVPKTSKNTPLNREITLSGYLLATQLATLNQSGINKPCLHSAMKKASINKVI CEEEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH TNRVSRIWQGFIDYYSLFEELDELEKLIVLQKDTTLSNHQQSELVKLSKNHNLQQSQTQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHH LQGLRDQLREELPCYLLANQVNQQSFGKKLKGYREGSLKTEERALLEKYLSDDTKMSLKS HHHHHHHHHHHCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHC GITLDQATVKHIKEEFLQRATHPTPHALRHIWAEAVLRRYRGNVGRFIRANFKHLNDDFF CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH MAYLRDKEMSAVYEISQRNVINDIVRQHLLALKDDQRNYTGGFDSYLNKVVNITNIASNE HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC DYIKMSQKISDRIGSIKPNPWVTCLLRSGTEERAKCSQNGIPQRRNASPKLCLGCINADI HHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCC TEGNYIGIVVYTSIDVAACRNPELPAFIKIQHLPVLQLAISQIKKLRNNSQDEKYNKFIN CCCCEEEEEEEEEECHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHH HLQESIDIAQKTIDGAK HHHHHHHHHHHHCCCCC >Mature Secondary Structure MRETDLHAKTSAYQNFMDMLDDLLQQLSPINSVTITDDLWIFTDREKKISINFNHFNLPY CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCEEEEEEEECCCCH TEFVREVSLSSKSDLIRVTTKEFAKLLWLSQHEDKVTYQSSIKILDVLSLLFSYLANKQI HHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE TYIAESELEDFFTYLLSYNLNQEGLNLRFYPPAYRTRLHFLNIKLLLQTLKIYGCPSLLP EEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH RLHYNKYKDAINNSCLNVLGITFSDYQKGGSFNFLGLDTGRHYIDFCSQTFEEQISYATA HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH CRLTMSEMSTEVSRQMGYKYTDVIQLVCSEILMGIPSNEIRGREIKKTSLPTLKGIVEIV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHH HCLFFKHYYAVIQQNNAFKLDTINSIIVKLGLPENRFDNQEFVRSMLFARYYGKNGKSRL HHHHHHHHHHHHCCCCCEEEHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHH NIIKEFIASLRSTHPKLKPQWSESDFNGIVDSVTQTTPIDINSVVSFFKEHHSMCDKLQR HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH FNKITHTIGVRKLERALMNVESAGVTLFVALTGWRATEFGFALNNIHISVNKDVLDSTYT HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHCEEEEEEEEEECCHHHCCCCC PYQFHVKWIVPKTSKNTPLNREITLSGYLLATQLATLNQSGINKPCLHSAMKKASINKVI CEEEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH TNRVSRIWQGFIDYYSLFEELDELEKLIVLQKDTTLSNHQQSELVKLSKNHNLQQSQTQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHH LQGLRDQLREELPCYLLANQVNQQSFGKKLKGYREGSLKTEERALLEKYLSDDTKMSLKS HHHHHHHHHHHCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHC GITLDQATVKHIKEEFLQRATHPTPHALRHIWAEAVLRRYRGNVGRFIRANFKHLNDDFF CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH MAYLRDKEMSAVYEISQRNVINDIVRQHLLALKDDQRNYTGGFDSYLNKVVNITNIASNE HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC DYIKMSQKISDRIGSIKPNPWVTCLLRSGTEERAKCSQNGIPQRRNASPKLCLGCINADI HHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCC TEGNYIGIVVYTSIDVAACRNPELPAFIKIQHLPVLQLAISQIKKLRNNSQDEKYNKFIN CCCCEEEEEEEEEECHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHH HLQESIDIAQKTIDGAK HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA