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The map label for this gene is yejH [C]

Identifier: 119943933

GI number: 119943933

Start: 190162

End: 191559

Strand: Reverse

Name: yejH [C]

Synonym: Ping_0145

Alternate gene names: 119943933

Gene position: 191559-190162 (Counterclockwise)

Preceding gene: 119943934

Following gene: 119943930

Centisome position: 4.2

GC content: 39.2

Gene sequence:

>1398_bases
ATGCTAAGAGCTTGGCAACAAGAATGTTTAACCACAGCAAAAAATCATTATTTAGAAATCAGTAAGCACTTTTTATGTTT
AGCAACACCCGCTTCCGGGAAAACCGTATTAGCCGCTGAAGTTGCAGGATATTTGTTTGACACAAAGCAAATAGATTTTG
TTTTATGTTTCTCGCCATCGATTACTGTGGCTGAAGGGATTAAGAATACCTTTGCACGTCGACTCAATTGTAATTTCGAT
GGTGTTATTGGCGCTATTGGTTGCTCTTATACCTATCAGAACATGCGGTTTTTTAACGAAGACAACTGGAAGATTATTAA
GAATAATAGAGTGTTAGTGGTGTTTGATGAGATCCATCACTGCTCAGGCTCCTCATTTGATGATGCGAACGCCTGGGGGC
AGGATATAGTGCAACACATTCAAGAACAGGCTGCGTATACTTTAGCGCTAACCGGGACTCCTTGGCGATCGGATCTCATC
CCCATTGCGCTTGCTAATTACAGCGATCCCGATAATAAAATTCAATGTGATTACACCTATTCACTACAACAAGCTGTCGA
TGATGGCGTTTGCAGAAACCCCAAAATCGTTTTAATTGATAACGAAGAAATATCAGTGACGACCAAAGAGCAAGAAACGA
AAGTCTTTAACTCACTGCATGATTTATTAAAAGCACCTTTAATTTCTTATCAGGATTTAATCTGTCATGAGGTAGTTATT
CAATATATCTTGCAAAAAGGCTGTAATAAACTCGCTGAAATCAGGCAGTTTAACCAAGATGCAGGCGGACTCATTGTTGC
TTCATCGGTGGAACATGCACAGCAGATATTGAAAATGCTCACTGAACAGTTCCAGCAAACCGCCGTTATTGTGACATATA
AAGAGCCGGATGCAGCTGAACGAATCAAACATTTTCGTTTCTGTAATACAGAGTGGATTGTCAGTGTTGGCATGGTTGCA
GAAGGTACGGACATACCCAGATTACAGGTTTGCTGCCATTTAAGCCGGGTTAAAACTGAGCTGTATTTCAGACAAGTTTT
AGGTCGAATTTTAAGAGTAAATGAGGCTGTAAATCAGGAGGCTTGGTTGTTCACTTTTGCTGAAGAAAAGTTAAGTATAT
TTGCCCACCGAATAGATCAAGAATTGCCTGATTCTAATGTCTTAGTACGCGGTAATGCTATTGCTAAGCAATTTGATATA
ACTACTGCTAATAAAAAATCAGCTTCATCTTCAACTGACTTGAAACCACCATTAATGATGTCATTATTCGATGATGGAGC
TTTCTCGGACAATTTAAACGATGCACCATCAGAAAATAAAAAAAACTATACCCCTGCTTATCTTGAATCTTTTGGTGGCT
TTAGAGAAAAACTGATTGAAGCGTTTAGCCCGATATAG

Upstream 100 bases:

>100_bases
AGCAGCACCAACTGCAAACTAAAAATCAATCCGTCCAACTTCTTGGCAAAGTGCATGCGTTACAAAAATTACTGGGTTAT
ACGGTCACGGGATATCAACC

Downstream 100 bases:

>100_bases
TTGATGATTATTGAATCCTCTATGCGACTGGCTGCTAGCGAATAGAAAAGTGATAATAGATTAGTGAAAGTGCTGGATAA
TATTAATCAAAAATACGGTA

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MLRAWQQECLTTAKNHYLEISKHFLCLATPASGKTVLAAEVAGYLFDTKQIDFVLCFSPSITVAEGIKNTFARRLNCNFD
GVIGAIGCSYTYQNMRFFNEDNWKIIKNNRVLVVFDEIHHCSGSSFDDANAWGQDIVQHIQEQAAYTLALTGTPWRSDLI
PIALANYSDPDNKIQCDYTYSLQQAVDDGVCRNPKIVLIDNEEISVTTKEQETKVFNSLHDLLKAPLISYQDLICHEVVI
QYILQKGCNKLAEIRQFNQDAGGLIVASSVEHAQQILKMLTEQFQQTAVIVTYKEPDAAERIKHFRFCNTEWIVSVGMVA
EGTDIPRLQVCCHLSRVKTELYFRQVLGRILRVNEAVNQEAWLFTFAEEKLSIFAHRIDQELPDSNVLVRGNAIAKQFDI
TTANKKSASSSTDLKPPLMMSLFDDGAFSDNLNDAPSENKKNYTPAYLESFGGFREKLIEAFSPI

Sequences:

>Translated_465_residues
MLRAWQQECLTTAKNHYLEISKHFLCLATPASGKTVLAAEVAGYLFDTKQIDFVLCFSPSITVAEGIKNTFARRLNCNFD
GVIGAIGCSYTYQNMRFFNEDNWKIIKNNRVLVVFDEIHHCSGSSFDDANAWGQDIVQHIQEQAAYTLALTGTPWRSDLI
PIALANYSDPDNKIQCDYTYSLQQAVDDGVCRNPKIVLIDNEEISVTTKEQETKVFNSLHDLLKAPLISYQDLICHEVVI
QYILQKGCNKLAEIRQFNQDAGGLIVASSVEHAQQILKMLTEQFQQTAVIVTYKEPDAAERIKHFRFCNTEWIVSVGMVA
EGTDIPRLQVCCHLSRVKTELYFRQVLGRILRVNEAVNQEAWLFTFAEEKLSIFAHRIDQELPDSNVLVRGNAIAKQFDI
TTANKKSASSSTDLKPPLMMSLFDDGAFSDNLNDAPSENKKNYTPAYLESFGGFREKLIEAFSPI
>Mature_465_residues
MLRAWQQECLTTAKNHYLEISKHFLCLATPASGKTVLAAEVAGYLFDTKQIDFVLCFSPSITVAEGIKNTFARRLNCNFD
GVIGAIGCSYTYQNMRFFNEDNWKIIKNNRVLVVFDEIHHCSGSSFDDANAWGQDIVQHIQEQAAYTLALTGTPWRSDLI
PIALANYSDPDNKIQCDYTYSLQQAVDDGVCRNPKIVLIDNEEISVTTKEQETKVFNSLHDLLKAPLISYQDLICHEVVI
QYILQKGCNKLAEIRQFNQDAGGLIVASSVEHAQQILKMLTEQFQQTAVIVTYKEPDAAERIKHFRFCNTEWIVSVGMVA
EGTDIPRLQVCCHLSRVKTELYFRQVLGRILRVNEAVNQEAWLFTFAEEKLSIFAHRIDQELPDSNVLVRGNAIAKQFDI
TTANKKSASSSTDLKPPLMMSLFDDGAFSDNLNDAPSENKKNYTPAYLESFGGFREKLIEAFSPI

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2917 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 52485; Mature: 52485

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAWQQECLTTAKNHYLEISKHFLCLATPASGKTVLAAEVAGYLFDTKQIDFVLCFSPS
CCCHHHHHHHHHHHHHHEEECCCEEEEECCCCCCEEEHHHHHHHHCCCCCCCEEEEECCC
ITVAEGIKNTFARRLNCNFDGVIGAIGCSYTYQNMRFFNEDNWKIIKNNRVLVVFDEIHH
CHHHHHHHHHHHHHHCCCCCCCEEHHCCCEECCCCEEECCCCCEEEECCCEEEEECCCCC
CSGSSFDDANAWGQDIVQHIQEQAAYTLALTGTPWRSDLIPIALANYSDPDNKIQCDYTY
CCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEH
SLQQAVDDGVCRNPKIVLIDNEEISVTTKEQETKVFNSLHDLLKAPLISYQDLICHEVVI
HHHHHHCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYILQKGCNKLAEIRQFNQDAGGLIVASSVEHAQQILKMLTEQFQQTAVIVTYKEPDAAE
HHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCEEEEEEECCCCHHH
RIKHFRFCNTEWIVSVGMVAEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRVNEAVNQE
HHHHHHCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AWLFTFAEEKLSIFAHRIDQELPDSNVLVRGNAIAKQFDITTANKKSASSSTDLKPPLMM
EEEEEEHHHHHHHHHHHHHHHCCCCCEEEECCHHHEEEECCCCCCCCCCCCCCCCCCHHH
SLFDDGAFSDNLNDAPSENKKNYTPAYLESFGGFREKLIEAFSPI
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHCCC
>Mature Secondary Structure
MLRAWQQECLTTAKNHYLEISKHFLCLATPASGKTVLAAEVAGYLFDTKQIDFVLCFSPS
CCCHHHHHHHHHHHHHHEEECCCEEEEECCCCCCEEEHHHHHHHHCCCCCCCEEEEECCC
ITVAEGIKNTFARRLNCNFDGVIGAIGCSYTYQNMRFFNEDNWKIIKNNRVLVVFDEIHH
CHHHHHHHHHHHHHHCCCCCCCEEHHCCCEECCCCEEECCCCCEEEECCCEEEEECCCCC
CSGSSFDDANAWGQDIVQHIQEQAAYTLALTGTPWRSDLIPIALANYSDPDNKIQCDYTY
CCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEH
SLQQAVDDGVCRNPKIVLIDNEEISVTTKEQETKVFNSLHDLLKAPLISYQDLICHEVVI
HHHHHHCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYILQKGCNKLAEIRQFNQDAGGLIVASSVEHAQQILKMLTEQFQQTAVIVTYKEPDAAE
HHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCEEEEEEECCCCHHH
RIKHFRFCNTEWIVSVGMVAEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRVNEAVNQE
HHHHHHCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AWLFTFAEEKLSIFAHRIDQELPDSNVLVRGNAIAKQFDITTANKKSASSSTDLKPPLMM
EEEEEEHHHHHHHHHHHHHHHCCCCCEEEECCHHHEEEECCCCCCCCCCCCCCCCCCHHH
SLFDDGAFSDNLNDAPSENKKNYTPAYLESFGGFREKLIEAFSPI
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]