| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943934
Identifier: 119943934
GI number: 119943934
Start: 191553
End: 192122
Strand: Reverse
Name: 119943934
Synonym: Ping_0146
Alternate gene names: NA
Gene position: 192122-191553 (Counterclockwise)
Preceding gene: 119943938
Following gene: 119943933
Centisome position: 4.21
GC content: 36.14
Gene sequence:
>570_bases ATGAGTCAGAAAGTTAATATGAATGTTTTTTTGCATTCTCTTTTGGTGATAAAGCAAATGAATGACTTCTCTGTGATAGC AGCTAAAGACGCTCTATTGCATGAACATGCTGAATTTACGGATTCAACAGAGGCTAGAAAATTTATCTACCGTCAATTAT TACGTGGTGTAGATAAAGGACTATTAAAGCGAACGGACCTTGTTGATGACGGAATAAAAAATGTTTTATATTCAAAAACA GAGAAGTTCTTTGCCTCTACGATTGTTCCGATGAAACGGGGTGATAAACAAAAGAAAAGTTCTTCTCCAAAAATCATTAA GCAAGCGCCTAAAACCATCAATTACAAAGCCTTGCTAGAAAAAGAGCTGATGACTTATGAAATTGATTTAAACGCAAGCA TTGAAGAAGTAAATGAATACAAGCGCCTTTCTAGTCGCTTTCCGGAATTAAAAGAAAAACTTCAGCAGCACCAACTGCAA ACTAAAAATCAATCCGTCCAACTTCTTGGCAAAGTGCATGCGTTACAAAAATTACTGGGTTATACGGTCACGGGATATCA ACCATGCTAA
Upstream 100 bases:
>100_bases AACTATTGATATTCCAGAGTAACTAATGAATAATTGCTCCGCTTGCAGAGCAATCCAGTCACACAAGAAATAATCAGCTT GTTTTAATAAAGGTCTAATA
Downstream 100 bases:
>100_bases GAGCTTGGCAACAAGAATGTTTAACCACAGCAAAAAATCATTATTTAGAAATCAGTAAGCACTTTTTATGTTTAGCAACA CCCGCTTCCGGGAAAACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSQKVNMNVFLHSLLVIKQMNDFSVIAAKDALLHEHAEFTDSTEARKFIYRQLLRGVDKGLLKRTDLVDDGIKNVLYSKT EKFFASTIVPMKRGDKQKKSSSPKIIKQAPKTINYKALLEKELMTYEIDLNASIEEVNEYKRLSSRFPELKEKLQQHQLQ TKNQSVQLLGKVHALQKLLGYTVTGYQPC
Sequences:
>Translated_189_residues MSQKVNMNVFLHSLLVIKQMNDFSVIAAKDALLHEHAEFTDSTEARKFIYRQLLRGVDKGLLKRTDLVDDGIKNVLYSKT EKFFASTIVPMKRGDKQKKSSSPKIIKQAPKTINYKALLEKELMTYEIDLNASIEEVNEYKRLSSRFPELKEKLQQHQLQ TKNQSVQLLGKVHALQKLLGYTVTGYQPC >Mature_188_residues SQKVNMNVFLHSLLVIKQMNDFSVIAAKDALLHEHAEFTDSTEARKFIYRQLLRGVDKGLLKRTDLVDDGIKNVLYSKTE KFFASTIVPMKRGDKQKKSSSPKIIKQAPKTINYKALLEKELMTYEIDLNASIEEVNEYKRLSSRFPELKEKLQQHQLQT KNQSVQLLGKVHALQKLLGYTVTGYQPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21745; Mature: 21613
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKVNMNVFLHSLLVIKQMNDFSVIAAKDALLHEHAEFTDSTEARKFIYRQLLRGVDKG CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLKRTDLVDDGIKNVLYSKTEKFFASTIVPMKRGDKQKKSSSPKIIKQAPKTINYKALLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHCCCCCCHHHHHH KELMTYEIDLNASIEEVNEYKRLSSRFPELKEKLQQHQLQTKNQSVQLLGKVHALQKLLG HHHHHEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC YTVTGYQPC CCCCCCCCC >Mature Secondary Structure SQKVNMNVFLHSLLVIKQMNDFSVIAAKDALLHEHAEFTDSTEARKFIYRQLLRGVDKG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLKRTDLVDDGIKNVLYSKTEKFFASTIVPMKRGDKQKKSSSPKIIKQAPKTINYKALLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHCCCCCCHHHHHH KELMTYEIDLNASIEEVNEYKRLSSRFPELKEKLQQHQLQTKNQSVQLLGKVHALQKLLG HHHHHEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC YTVTGYQPC CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA