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The map label for this gene is yiiZ [H]

Identifier: 119943925

GI number: 119943925

Start: 177167

End: 178141

Strand: Direct

Name: yiiZ [H]

Synonym: Ping_0135

Alternate gene names: 119943925

Gene position: 177167-178141 (Clockwise)

Preceding gene: 119943916

Following gene: 119943926

Centisome position: 3.89

GC content: 39.28

Gene sequence:

>975_bases
ATGAATATTCGTAAAAATATACTAACGACGGTTATTGGAACAGCATTATTTATTGGTCTATCTGCATCATCTATAGCTGC
GACAACCTTAAAGTTAAGCCATAATCATAATCGCGATCATGCCGTGCATAAAGCGATGACCGCAATGGCAACAGAAGTTA
AAGCGGAAACAAAAGGTGAAGTGATAATTCGTATTTACCCAGATGCTCAATTAGGTACGCAGCGTGAATCAATGGAGTTA
TTGCAAAATGGTGCACTTGATTTAGTAAAAAGTAATGCGGCAGAGCTGGAAGCATTTTCATCTGACTACTCAGCATTCAA
CTTACCTTACTTATTCCGTGACAAACAGCATTTTTATAACGTGCAAGAAGGCGCTGTAGGTGAAGATATTCTGGAAGCTT
CTCGGAGTAGTGGTTTTATTGGTTTGACTTATTATGATGCAGGAGCTCGAAGCTTTTACGCTGGTAAACCAATTAATAGC
CCTGAAGACTTAAAAGGTCTAAAAGTTCGTGTTCAGCCTAGCCCTTCTGCAATTAACATGGTGACAGCGCTTGGCGGTAA
CCCAACTCCATTGGCATATGGTGAGTTATATACTGCACTGCAACAAGGAGTGGTGGATGCTGCTGAAAATAACATTCCAT
CATTTAGCTTAAGTGGTCATGCTGAAGTATCTAAATTTATGACCTTAGATGAGCACACAATGGTGCCTGATGTATTGGTT
ATTTCTACTAAAGCATTTGATGCAATGACACCAGAAAACCAAAAAATTGTTAAACAAGCAGCGCTTCACTCATCGCAATT
AATGAAAACACTTTGGGCTGAATCAGAAACTAAAGAGCGTACTAAAGCAGAAAAAATGGGTGTTACATTCATTAACCCTG
ATAAAACACCGTTTATGGAGGCTGTTCAGCCGATATATCAGCAGTTAACTCCTGAAATAACCGCGTTAGTTGAGCGAATT
AAAGCAGTTAAGTAA

Upstream 100 bases:

>100_bases
CCAATTTACATTTTTGGTTTGACTATAATATATTATCGGTAAATAATCATTTTGTCTTGGAGCCCCTGGGCGATAATTAA
AATTATTATGGAGTAAATAA

Downstream 100 bases:

>100_bases
AAATATTTGCCAGTGATGGTTATCTATTTAACTCAAATCCAGTGCTTCTTACCGAACCGAAATAACATATAACTAAGTTT
CGTGTAATAAGTGTTTTTAA

Product: TRAP dicarboxylate transporter, DctP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNIRKNILTTVIGTALFIGLSASSIAATTLKLSHNHNRDHAVHKAMTAMATEVKAETKGEVIIRIYPDAQLGTQRESMEL
LQNGALDLVKSNAAELEAFSSDYSAFNLPYLFRDKQHFYNVQEGAVGEDILEASRSSGFIGLTYYDAGARSFYAGKPINS
PEDLKGLKVRVQPSPSAINMVTALGGNPTPLAYGELYTALQQGVVDAAENNIPSFSLSGHAEVSKFMTLDEHTMVPDVLV
ISTKAFDAMTPENQKIVKQAALHSSQLMKTLWAESETKERTKAEKMGVTFINPDKTPFMEAVQPIYQQLTPEITALVERI
KAVK

Sequences:

>Translated_324_residues
MNIRKNILTTVIGTALFIGLSASSIAATTLKLSHNHNRDHAVHKAMTAMATEVKAETKGEVIIRIYPDAQLGTQRESMEL
LQNGALDLVKSNAAELEAFSSDYSAFNLPYLFRDKQHFYNVQEGAVGEDILEASRSSGFIGLTYYDAGARSFYAGKPINS
PEDLKGLKVRVQPSPSAINMVTALGGNPTPLAYGELYTALQQGVVDAAENNIPSFSLSGHAEVSKFMTLDEHTMVPDVLV
ISTKAFDAMTPENQKIVKQAALHSSQLMKTLWAESETKERTKAEKMGVTFINPDKTPFMEAVQPIYQQLTPEITALVERI
KAVK
>Mature_324_residues
MNIRKNILTTVIGTALFIGLSASSIAATTLKLSHNHNRDHAVHKAMTAMATEVKAETKGEVIIRIYPDAQLGTQRESMEL
LQNGALDLVKSNAAELEAFSSDYSAFNLPYLFRDKQHFYNVQEGAVGEDILEASRSSGFIGLTYYDAGARSFYAGKPINS
PEDLKGLKVRVQPSPSAINMVTALGGNPTPLAYGELYTALQQGVVDAAENNIPSFSLSGHAEVSKFMTLDEHTMVPDVLV
ISTKAFDAMTPENQKIVKQAALHSSQLMKTLWAESETKERTKAEKMGVTFINPDKTPFMEAVQPIYQQLTPEITALVERI
KAVK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=320, Percent_Identity=29.375, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35440; Mature: 35440

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRKNILTTVIGTALFIGLSASSIAATTLKLSHNHNRDHAVHKAMTAMATEVKAETKGE
CCHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
VIIRIYPDAQLGTQRESMELLQNGALDLVKSNAAELEAFSSDYSAFNLPYLFRDKQHFYN
EEEEECCCCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCEECCHHHHCC
VQEGAVGEDILEASRSSGFIGLTYYDAGARSFYAGKPINSPEDLKGLKVRVQPSPSAINM
CCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCCCCHHHH
VTALGGNPTPLAYGELYTALQQGVVDAAENNIPSFSLSGHAEVSKFMTLDEHTMVPDVLV
HEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHCCCCCCCCCCEEE
ISTKAFDAMTPENQKIVKQAALHSSQLMKTLWAESETKERTKAEKMGVTFINPDKTPFME
EECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHH
AVQPIYQQLTPEITALVERIKAVK
HHHHHHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIRKNILTTVIGTALFIGLSASSIAATTLKLSHNHNRDHAVHKAMTAMATEVKAETKGE
CCHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
VIIRIYPDAQLGTQRESMELLQNGALDLVKSNAAELEAFSSDYSAFNLPYLFRDKQHFYN
EEEEECCCCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCEECCHHHHCC
VQEGAVGEDILEASRSSGFIGLTYYDAGARSFYAGKPINSPEDLKGLKVRVQPSPSAINM
CCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCCCCHHHH
VTALGGNPTPLAYGELYTALQQGVVDAAENNIPSFSLSGHAEVSKFMTLDEHTMVPDVLV
HEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHCCCCCCCCCCEEE
ISTKAFDAMTPENQKIVKQAALHSSQLMKTLWAESETKERTKAEKMGVTFINPDKTPFME
EECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHH
AVQPIYQQLTPEITALVERIKAVK
HHHHHHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]