Click here to switch to the map view.

The map label for this gene is rmuC [H]

Identifier: 119943876

GI number: 119943876

Start: 111015

End: 112376

Strand: Reverse

Name: rmuC [H]

Synonym: Ping_0083

Alternate gene names: 119943876

Gene position: 112376-111015 (Counterclockwise)

Preceding gene: 119943877

Following gene: 119943870

Centisome position: 2.46

GC content: 38.03

Gene sequence:

>1362_bases
ATGTTATTATCTCCTTTGATGCTTCTCGTCAGCAGTGCTTCATTAATTTTCAGCCTTATTATTATTTTTTCCTGGGCTTT
ATTACGTTTAAAAAAACAACGGGATCACTTGTTTATTGAGCAAAAATTAACCGCTCAAGAACTTCTGCACAATCAAAATA
TAAATATTGAAAAATCCCAAACACTACTGGAAAAACAATCATTCATTGATAGTTTGCAACATCAAAGCAACAAGTTGACT
GTACGTTTAAGAGAAACAGAAGTTCATTTGCAGAGCGCCACTCAACGCCTTAGAGAACAGCAGGAAAATGAACAGAAGCT
GAGCAATCAATTCGAATTGCTTTCTCAACGTATTTTCAGCGAAAAATCCGCACAGTTTAAACAACTAAACCAAGACAGTA
TCAGTCAACTACTTGACCCTTTAAAAACCCAGTTAGATAGTTTTAAAAAGCAAGTCACTGATTGTTACGTTAATGAGAGT
AAAGAACGTTATAATTTACAGAATGAAATTTCTAACCTGGCCAAACTCAATGAATTAATGCAGCAGGAAACTAATAATCT
GACCAATGCATTAAAAGGCGATAATAAGCAGCAGGGTAATTGGGGGGAGATTATTTTACAGCGAATTTTAGAGTCGTCCG
GATTGCGTGAGGGCCATGAATACAAAACCCAGGTTAGTTTTCAAAATGATCAGGGGCAGCGTTTACAGCCTGATGTGGTG
GTACAATTACCGCAAAACAAAAATATTATTATTGATTCAAAAGTATCTTTAGTCGCCTACGAGCGATTCTTTAATGCCGA
TGATCTGCAAACCCAAAAAGAGGCATTACAGGCACATGCTCTCTCTCTTCGTCAGCATATTAAAGGATTAGGAAAAAAGA
ATTATCAGAATTTGATTGGCAGTAATACCCTTGATTATGTTTTATTATTTGTGGCCGTTGAACCCGCTTTTATCACCGCG
CTGGAGCATGACCCCGAGTTGGTTAAGTTAGCACTGGATAACAATGTACTACTCGCCAGTCCAACCAACTTAATGATTGC
GTTACGTACTATTGATAACTTATGGCGCTTTGAGCAACAGGAGCAAAATGGTCGTTTAATTGCCCAGCAGGCGGGTAAAT
TATATGACAAATTACGCTTGTTTAGTGAAAATATGTTGGATGTTGGCTCACAGCTGAATAAAGCACAAAACAGTTATGAT
CGGGCACTGAAGCAATTCAGTCAGGGTCGGGGTAATCTTATTCAACAAGCGGAACAGTTAAAAGAAATGGGCGTAACAGT
TACTAAACCTTTACCTGAAACCTTGGTTGAACGCACTAATTTAGAGAATTCTGCTTTCCACGCTAAAAACAGCCAAGACT
AG

Upstream 100 bases:

>100_bases
ATAAAGGAGTCGTGGTTGTGGTTTATATAATCTATCTATTAGTTTGGAAAAGTCTTAACAGAAAAGTTAAGAATTACCTT
AAAAAATTTGAATATTCATA

Downstream 100 bases:

>100_bases
CGGTGCTGAAAATAAGGCTAAAACAAGATCATACCAGCAGGCAAAGCAGCTCGTAGGGTGCGCTCCGCGCACCGATTGCG
GCTGGTTGCGGTGCATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MLLSPLMLLVSSASLIFSLIIIFSWALLRLKKQRDHLFIEQKLTAQELLHNQNINIEKSQTLLEKQSFIDSLQHQSNKLT
VRLRETEVHLQSATQRLREQQENEQKLSNQFELLSQRIFSEKSAQFKQLNQDSISQLLDPLKTQLDSFKKQVTDCYVNES
KERYNLQNEISNLAKLNELMQQETNNLTNALKGDNKQQGNWGEIILQRILESSGLREGHEYKTQVSFQNDQGQRLQPDVV
VQLPQNKNIIIDSKVSLVAYERFFNADDLQTQKEALQAHALSLRQHIKGLGKKNYQNLIGSNTLDYVLLFVAVEPAFITA
LEHDPELVKLALDNNVLLASPTNLMIALRTIDNLWRFEQQEQNGRLIAQQAGKLYDKLRLFSENMLDVGSQLNKAQNSYD
RALKQFSQGRGNLIQQAEQLKEMGVTVTKPLPETLVERTNLENSAFHAKNSQD

Sequences:

>Translated_453_residues
MLLSPLMLLVSSASLIFSLIIIFSWALLRLKKQRDHLFIEQKLTAQELLHNQNINIEKSQTLLEKQSFIDSLQHQSNKLT
VRLRETEVHLQSATQRLREQQENEQKLSNQFELLSQRIFSEKSAQFKQLNQDSISQLLDPLKTQLDSFKKQVTDCYVNES
KERYNLQNEISNLAKLNELMQQETNNLTNALKGDNKQQGNWGEIILQRILESSGLREGHEYKTQVSFQNDQGQRLQPDVV
VQLPQNKNIIIDSKVSLVAYERFFNADDLQTQKEALQAHALSLRQHIKGLGKKNYQNLIGSNTLDYVLLFVAVEPAFITA
LEHDPELVKLALDNNVLLASPTNLMIALRTIDNLWRFEQQEQNGRLIAQQAGKLYDKLRLFSENMLDVGSQLNKAQNSYD
RALKQFSQGRGNLIQQAEQLKEMGVTVTKPLPETLVERTNLENSAFHAKNSQD
>Mature_453_residues
MLLSPLMLLVSSASLIFSLIIIFSWALLRLKKQRDHLFIEQKLTAQELLHNQNINIEKSQTLLEKQSFIDSLQHQSNKLT
VRLRETEVHLQSATQRLREQQENEQKLSNQFELLSQRIFSEKSAQFKQLNQDSISQLLDPLKTQLDSFKKQVTDCYVNES
KERYNLQNEISNLAKLNELMQQETNNLTNALKGDNKQQGNWGEIILQRILESSGLREGHEYKTQVSFQNDQGQRLQPDVV
VQLPQNKNIIIDSKVSLVAYERFFNADDLQTQKEALQAHALSLRQHIKGLGKKNYQNLIGSNTLDYVLLFVAVEPAFITA
LEHDPELVKLALDNNVLLASPTNLMIALRTIDNLWRFEQQEQNGRLIAQQAGKLYDKLRLFSENMLDVGSQLNKAQNSYD
RALKQFSQGRGNLIQQAEQLKEMGVTVTKPLPETLVERTNLENSAFHAKNSQD

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=373, Percent_Identity=50.9383378016086, Blast_Score=396, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 52061; Mature: 52061

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSPLMLLVSSASLIFSLIIIFSWALLRLKKQRDHLFIEQKLTAQELLHNQNINIEKSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLLEKQSFIDSLQHQSNKLTVRLRETEVHLQSATQRLREQQENEQKLSNQFELLSQRIFS
HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKSAQFKQLNQDSISQLLDPLKTQLDSFKKQVTDCYVNESKERYNLQNEISNLAKLNELM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QQETNNLTNALKGDNKQQGNWGEIILQRILESSGLREGHEYKTQVSFQNDQGQRLQPDVV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCCCCCEE
VQLPQNKNIIIDSKVSLVAYERFFNADDLQTQKEALQAHALSLRQHIKGLGKKNYQNLIG
EECCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
SNTLDYVLLFVAVEPAFITALEHDPELVKLALDNNVLLASPTNLMIALRTIDNLWRFEQQ
CCHHHHHHHHHHHCHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHH
EQNGRLIAQQAGKLYDKLRLFSENMLDVGSQLNKAQNSYDRALKQFSQGRGNLIQQAEQL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KEMGVTVTKPLPETLVERTNLENSAFHAKNSQD
HHCCCEECCCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLSPLMLLVSSASLIFSLIIIFSWALLRLKKQRDHLFIEQKLTAQELLHNQNINIEKSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLLEKQSFIDSLQHQSNKLTVRLRETEVHLQSATQRLREQQENEQKLSNQFELLSQRIFS
HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKSAQFKQLNQDSISQLLDPLKTQLDSFKKQVTDCYVNESKERYNLQNEISNLAKLNELM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QQETNNLTNALKGDNKQQGNWGEIILQRILESSGLREGHEYKTQVSFQNDQGQRLQPDVV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCCCCCEE
VQLPQNKNIIIDSKVSLVAYERFFNADDLQTQKEALQAHALSLRQHIKGLGKKNYQNLIG
EECCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
SNTLDYVLLFVAVEPAFITALEHDPELVKLALDNNVLLASPTNLMIALRTIDNLWRFEQQ
CCHHHHHHHHHHHCHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHH
EQNGRLIAQQAGKLYDKLRLFSENMLDVGSQLNKAQNSYDRALKQFSQGRGNLIQQAEQL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KEMGVTVTKPLPETLVERTNLENSAFHAKNSQD
HHCCCEECCCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]